RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 SHPRHQ149N8 1683 aa12.51□□□□□ -0.41
PHGDH-217ENST00000641455 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-217ENST00000641455 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
PHGDH-217ENST00000641455 CDK12Q9NYV4 1490 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-217ENST00000641455 ADGRB3O60242 1522 aa12.49□□□□□ -0.41
PHGDH-217ENST00000641455 RRP7BPQ9NSQ0 103 aa12.49□□□□□ -0.41
PHGDH-217ENST00000641455 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
PHGDH-217ENST00000641455 AFF2P51816 1311 aa12.48□□□□□ -0.41
PHGDH-217ENST00000641455 ATF3P18847 181 aa12.48□□□□□ -0.41
PHGDH-217ENST00000641455 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-217ENST00000641455 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
PHGDH-217ENST00000641455 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
PHGDH-217ENST00000641455 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.41
PHGDH-217ENST00000641455 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
PHGDH-217ENST00000641455 RGS12O14924 1447 aa12.45□□□□□ -0.42
PHGDH-217ENST00000641455 PLEKHG1Q9ULL1 1385 aa12.44□□□□□ -0.42
PHGDH-217ENST00000641455 C8orf37Q96NL8 207 aa12.44□□□□□ -0.42
PHGDH-217ENST00000641455 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-217ENST00000641455 RBM6P78332 1123 aaKnown RBP12.43□□□□□ -0.42
PHGDH-217ENST00000641455 FOXD1Q16676 465 aa12.43□□□□□ -0.42
PHGDH-217ENST00000641455 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
PHGDH-217ENST00000641455 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
PHGDH-217ENST00000641455 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
PHGDH-217ENST00000641455 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
PHGDH-217ENST00000641455 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
PHGDH-217ENST00000641455 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 NOS1P29475 1434 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 DIP2AQ14689 1571 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
PHGDH-217ENST00000641455 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
PHGDH-217ENST00000641455 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
PHGDH-217ENST00000641455 ABCC5O15440 1437 aa12.4□□□□□ -0.42
PHGDH-217ENST00000641455 ZFYVE9O95405 1425 aa12.4□□□□□ -0.42
PHGDH-217ENST00000641455 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
PHGDH-217ENST00000641455 GCC2Q8IWJ2 1684 aa12.4□□□□□ -0.42
PHGDH-217ENST00000641455 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
PHGDH-217ENST00000641455 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
PHGDH-217ENST00000641455 ASXL1Q8IXJ9 1541 aa12.38□□□□□ -0.43
PHGDH-217ENST00000641455 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
PHGDH-217ENST00000641455 KANK4Q5T7N3 995 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-217ENST00000641455 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
PHGDH-217ENST00000641455 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
PHGDH-217ENST00000641455 DAPK1P53355 1430 aa12.37□□□□□ -0.43
PHGDH-217ENST00000641455 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
PHGDH-217ENST00000641455 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
PHGDH-217ENST00000641455 ANKRD30AQ9BXX3 1397 aa12.36□□□□□ -0.43
PHGDH-217ENST00000641455 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
PHGDH-217ENST00000641455 PTPN23Q9H3S7 1636 aa12.36□□□□□ -0.43
PHGDH-217ENST00000641455 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
PHGDH-217ENST00000641455 SRCAPQ6ZRS2 3230 aa12.34□□□□□ -0.43
PHGDH-217ENST00000641455 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
PHGDH-217ENST00000641455 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
PHGDH-217ENST00000641455 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
PHGDH-217ENST00000641455 TRPM2O94759 1503 aa12.34□□□□□ -0.43
PHGDH-217ENST00000641455 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
PHGDH-217ENST00000641455 AMOTL2Q9Y2J4 779 aa12.34□□□□□ -0.43
PHGDH-217ENST00000641455 RPRD2Q5VT52 1461 aaKnown RBP12.34□□□□□ -0.43
PHGDH-217ENST00000641455 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
PHGDH-217ENST00000641455 DCCP43146 1447 aa12.33□□□□□ -0.44
PHGDH-217ENST00000641455 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
PHGDH-217ENST00000641455 MST1RQ04912 1400 aa12.32□□□□□ -0.44
PHGDH-217ENST00000641455 USP21Q9UK80 565 aa12.32□□□□□ -0.44
PHGDH-217ENST00000641455 TRPC5Q9UL62 973 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-217ENST00000641455 PTPRUQ92729 1446 aa12.3□□□□□ -0.44
PHGDH-217ENST00000641455 UNC13BO14795 1591 aa12.27□□□□□ -0.44
PHGDH-217ENST00000641455 CCDC125Q86Z20 511 aa12.27□□□□□ -0.45
PHGDH-217ENST00000641455 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
PHGDH-217ENST00000641455 ANKRD50Q9ULJ7 1429 aa12.26□□□□□ -0.45
PHGDH-217ENST00000641455 APLP2Q06481 763 aa12.25□□□□□ -0.45
PHGDH-217ENST00000641455 ATRNO75882 1429 aa12.25□□□□□ -0.45
PHGDH-217ENST00000641455 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
PHGDH-217ENST00000641455 PTCH1Q13635 1447 aa12.24□□□□□ -0.45
PHGDH-217ENST00000641455 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
PHGDH-217ENST00000641455 ADGRL2O95490 1459 aa12.23□□□□□ -0.45
PHGDH-217ENST00000641455 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-217ENST00000641455 E9PCH4 1651 aa12.22□□□□□ -0.45
PHGDH-217ENST00000641455 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
PHGDH-217ENST00000641455 FAM50AQ14320 339 aaKnown RBP12.22□□□□□ -0.45
PHGDH-217ENST00000641455 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.45
PHGDH-217ENST00000641455 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.45
PHGDH-217ENST00000641455 NRXN3Q9Y4C0 1643 aa12.21□□□□□ -0.46
PHGDH-217ENST00000641455 METP08581 1390 aa12.2□□□□□ -0.46
PHGDH-217ENST00000641455 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
PHGDH-217ENST00000641455 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
PHGDH-217ENST00000641455 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-217ENST00000641455 SOS2Q07890 1332 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-217ENST00000641455 GJD4Q96KN9 370 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-217ENST00000641455 LRP5O75197 1615 aa12.19□□□□□ -0.46
PHGDH-217ENST00000641455 LAMC1P11047 1609 aa12.18□□□□□ -0.46
PHGDH-217ENST00000641455 EP400Q96L91 3159 aa12.17□□□□□ -0.46
PHGDH-217ENST00000641455 BCL9LQ86UU0 1499 aa12.17□□□□□ -0.46
PHGDH-217ENST00000641455 COL22A1Q8NFW1 1626 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-217ENST00000641455 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-217ENST00000641455 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
PHGDH-217ENST00000641455 MYOM2P54296 1465 aa12.15□□□□□ -0.46
PHGDH-217ENST00000641455 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
PHGDH-217ENST00000641455 XPCQ01831 940 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms