RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 IFT172Q9UG01 1749 aa31.2■■■□□ 2.59
TSPAN9-208ENST00000640568 ARHGAP23Q9P227 1491 aa31.2■■■□□ 2.59
TSPAN9-208ENST00000640568 EID1Q9Y6B2 187 aa31.2■■■□□ 2.58
TSPAN9-208ENST00000640568 RPGRIP1LQ68CZ1 1315 aa31.19■■■□□ 2.58
TSPAN9-208ENST00000640568 NEXMIFQ5QGS0 1516 aa31.19■■■□□ 2.58
TSPAN9-208ENST00000640568 TONSLQ96HA7 1378 aa31.18■■■□□ 2.58
TSPAN9-208ENST00000640568 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.17■■■□□ 2.58
TSPAN9-208ENST00000640568 PPP1R15AO75807 674 aaPredicted RBP31.16■■■□□ 2.58
TSPAN9-208ENST00000640568 ANKLE2Q86XL3 938 aa31.16■■■□□ 2.58
TSPAN9-208ENST00000640568 ZFYVE9O95405 1425 aa31.16■■■□□ 2.58
TSPAN9-208ENST00000640568 TXNDC2Q86VQ3 553 aa31.15■■■□□ 2.58
TSPAN9-208ENST00000640568 SCAF11Q99590 1463 aaKnown RBP31.14■■■□□ 2.58
TSPAN9-208ENST00000640568 NUTM2DQ5VT03 806 aaPredicted RBP31.14■■■□□ 2.57
TSPAN9-208ENST00000640568 DCAF11Q8TEB1 546 aa31.11■■■□□ 2.57
TSPAN9-208ENST00000640568 VGFO15240 615 aaPredicted RBP31.1■■■□□ 2.57
TSPAN9-208ENST00000640568 LTKP29376 864 aa31.09■■■□□ 2.57
TSPAN9-208ENST00000640568 STRCQ7RTU9 1775 aa31.09■■■□□ 2.57
TSPAN9-208ENST00000640568 NCKAP5LQ9HCH0 1330 aa31.08■■■□□ 2.57
TSPAN9-208ENST00000640568 L3MBTL2Q969R5 705 aa31.08■■■□□ 2.57
TSPAN9-208ENST00000640568 KDM2AQ9Y2K7 1162 aa31.08■■■□□ 2.57
TSPAN9-208ENST00000640568 MYOM2P54296 1465 aa31.06■■■□□ 2.56
TSPAN9-208ENST00000640568 BCANQ96GW7 911 aa31.06■■■□□ 2.56
TSPAN9-208ENST00000640568 STAC3Q96MF2 364 aa31.05■■■□□ 2.56
TSPAN9-208ENST00000640568 IQGAP1P46940 1657 aa31.04■■■□□ 2.56
TSPAN9-208ENST00000640568 TIMELESSQ9UNS1 1208 aa31.02■■■□□ 2.56
TSPAN9-208ENST00000640568 PLEKHG1Q9ULL1 1385 aa31.02■■■□□ 2.56
TSPAN9-208ENST00000640568 NPHP4O75161 1426 aaPredicted RBP31.01■■■□□ 2.56
TSPAN9-208ENST00000640568 MED14O60244 1454 aa31.01■■■□□ 2.55
TSPAN9-208ENST00000640568 SENP3Q9H4L4 574 aaPredicted RBP31.01■■■□□ 2.55
TSPAN9-208ENST00000640568 ADGRF5Q8IZF2 1346 aa31■■■□□ 2.55
TSPAN9-208ENST00000640568 SETBP1Q9Y6X0 1596 aa30.96■■■□□ 2.55
TSPAN9-208ENST00000640568 NRXN1Q9ULB1 1477 aa30.96■■■□□ 2.55
TSPAN9-208ENST00000640568 PIK3C2GO75747 1445 aa30.94■■■□□ 2.54
TSPAN9-208ENST00000640568 NRXN3Q9Y4C0 1643 aa30.94■■■□□ 2.54
TSPAN9-208ENST00000640568 DMRT2Q9Y5R5 561 aa30.94■■■□□ 2.54
TSPAN9-208ENST00000640568 LAMC1P11047 1609 aa30.92■■■□□ 2.54
TSPAN9-208ENST00000640568 DIP2AQ14689 1571 aa30.92■■■□□ 2.54
TSPAN9-208ENST00000640568 PRAG1Q86YV5 1406 aa30.91■■■□□ 2.54
TSPAN9-208ENST00000640568 ALKQ9UM73 1620 aa30.89■■■□□ 2.53
TSPAN9-208ENST00000640568 SLC26A8Q96RN1 970 aa30.89■■■□□ 2.53
TSPAN9-208ENST00000640568 ADAMTS13Q76LX8 1427 aa30.87■■■□□ 2.53
TSPAN9-208ENST00000640568 SETD1AO15047 1707 aaKnown RBP30.86■■■□□ 2.53
TSPAN9-208ENST00000640568 KIAA1210Q9ULL0 1709 aa30.86■■■□□ 2.53
TSPAN9-208ENST00000640568 TBX22Q9Y458 520 aa30.83■■■□□ 2.53
TSPAN9-208ENST00000640568 TRPM1Q7Z4N2 1603 aa30.83■■■□□ 2.53
TSPAN9-208ENST00000640568 CFAP70Q5T0N1 1121 aa30.82■■■□□ 2.53
TSPAN9-208ENST00000640568 C14orf93Q9H972 538 aaKnown RBP30.82■■■□□ 2.52
TSPAN9-208ENST00000640568 NBPF8Q3BBV2 869 aa30.79■■■□□ 2.52
TSPAN9-208ENST00000640568 CHD2O14647 1828 aaKnown RBP30.76■■■□□ 2.51
TSPAN9-208ENST00000640568 PIK3R4Q99570 1358 aa30.75■■■□□ 2.51
TSPAN9-208ENST00000640568 METP08581 1390 aa30.74■■■□□ 2.51
TSPAN9-208ENST00000640568 ZEB1P37275 1124 aaPredicted RBP30.73■■■□□ 2.51
TSPAN9-208ENST00000640568 RALGAPBQ86X10 1494 aa30.72■■■□□ 2.51
TSPAN9-208ENST00000640568 ROCK2O75116 1388 aaKnown RBP30.72■■■□□ 2.51
TSPAN9-208ENST00000640568 ASXL1Q8IXJ9 1541 aa30.72■■■□□ 2.51
TSPAN9-208ENST00000640568 TMEM132EQ6IEE7 984 aa30.72■■■□□ 2.51
TSPAN9-208ENST00000640568 ADGRB1O14514 1584 aa30.7■■■□□ 2.5
TSPAN9-208ENST00000640568 NBPF1Q3BBV0 1214 aa30.68■■■□□ 2.5
TSPAN9-208ENST00000640568 NWD1Q149M9 1564 aa30.67■■■□□ 2.5
TSPAN9-208ENST00000640568 YTHDC2Q9H6S0 1430 aaKnown RBP30.67■■■□□ 2.5
TSPAN9-208ENST00000640568 KNDC1Q76NI1 1749 aa30.66■■■□□ 2.5
TSPAN9-208ENST00000640568 XRN1Q8IZH2 1706 aaKnown RBP30.65■■■□□ 2.5
TSPAN9-208ENST00000640568 KCNA6P17658 529 aa30.65■■■□□ 2.5
TSPAN9-208ENST00000640568 AMOTL2Q9Y2J4 779 aa30.65■■■□□ 2.5
TSPAN9-208ENST00000640568 PTPRUQ92729 1446 aa30.65■■■□□ 2.5
TSPAN9-208ENST00000640568 STRCP1A6NGW2 1772 aa30.65■■■□□ 2.5
TSPAN9-208ENST00000640568 STK26Q9P289 416 aa30.64■■■□□ 2.5
TSPAN9-208ENST00000640568 ZNF335Q9H4Z2 1342 aaPredicted RBP30.64■■■□□ 2.5
TSPAN9-208ENST00000640568 LRPPRCP42704 1394 aaKnown RBP30.63■■■□□ 2.49
TSPAN9-208ENST00000640568 CARD11Q9BXL7 1154 aa30.63■■■□□ 2.49
TSPAN9-208ENST00000640568 GPRASP1Q5JY77 1395 aa30.6■■■□□ 2.49
TSPAN9-208ENST00000640568 NKTRP30414 1462 aaKnown RBP30.6■■■□□ 2.49
TSPAN9-208ENST00000640568 TRAK1Q9UPV9 953 aa30.58■■■□□ 2.49
TSPAN9-208ENST00000640568 ABCC11Q96J66 1382 aa30.58■■■□□ 2.49
TSPAN9-208ENST00000640568 CPS1P31327 1500 aa30.58■■■□□ 2.49
TSPAN9-208ENST00000640568 ARHGEF28Q8N1W1 1705 aaKnown RBP30.57■■■□□ 2.48
TSPAN9-208ENST00000640568 TECPR2O15040 1411 aa30.56■■■□□ 2.48
TSPAN9-208ENST00000640568 PTCH1Q13635 1447 aa30.56■■■□□ 2.48
TSPAN9-208ENST00000640568 DLC1Q96QB1 1528 aa30.55■■■□□ 2.48
TSPAN9-208ENST00000640568 EIF3AQ14152 1382 aaKnown RBP30.52■■■□□ 2.48
TSPAN9-208ENST00000640568 PROSER2Q86WR7 435 aaPredicted RBP30.51■■■□□ 2.48
TSPAN9-208ENST00000640568 ROBO2Q9HCK4 1378 aa30.51■■■□□ 2.47
TSPAN9-208ENST00000640568 LTBP4Q8N2S1 1624 aa30.5■■■□□ 2.47
TSPAN9-208ENST00000640568 FAM135BQ49AJ0 1406 aa30.49■■■□□ 2.47
TSPAN9-208ENST00000640568 POGKQ9P215 609 aa30.49■■■□□ 2.47
TSPAN9-208ENST00000640568 SIRT1Q96EB6 747 aa30.48■■■□□ 2.47
TSPAN9-208ENST00000640568 PRAM1Q96QH2 718 aa30.47■■■□□ 2.47
TSPAN9-208ENST00000640568 LRRC7Q96NW7 1537 aa30.45■■■□□ 2.47
TSPAN9-208ENST00000640568 WAPLQ7Z5K2 1190 aa30.45■■■□□ 2.47
TSPAN9-208ENST00000640568 USP47Q96K76 1375 aa30.45■■■□□ 2.47
TSPAN9-208ENST00000640568 QRICH2Q9H0J4 1663 aa30.44■■■□□ 2.46
TSPAN9-208ENST00000640568 XIRP1Q702N8 1843 aaKnown RBP30.44■■■□□ 2.46
TSPAN9-208ENST00000640568 C14orf37Q86TY3 774 aa30.44■■■□□ 2.46
TSPAN9-208ENST00000640568 SAFB2Q14151 953 aaKnown RBP eCLIP30.43■■■□□ 2.46
TSPAN9-208ENST00000640568 RBM33Q96EV2 1170 aaKnown RBP30.43■■■□□ 2.46
TSPAN9-208ENST00000640568 TMEM94Q12767 1356 aa30.43■■■□□ 2.46
TSPAN9-208ENST00000640568 CENPJQ9HC77 1338 aaPredicted RBP30.42■■■□□ 2.46
TSPAN9-208ENST00000640568 PLEKHH1Q9ULM0 1364 aa30.42■■■□□ 2.46
TSPAN9-208ENST00000640568 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.46
TSPAN9-208ENST00000640568 EIF4G2P78344 907 aaKnown RBP eCLIP30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms