RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
TARDBP-231ENST00000639599 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.41■■□□□ 1.18
TARDBP-231ENST00000639599 TET3O43151 1660 aa22.4■■□□□ 1.18
TARDBP-231ENST00000639599 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
TARDBP-231ENST00000639599 NUP155O75694 1391 aa22.38■■□□□ 1.17
TARDBP-231ENST00000639599 MSH6P52701 1360 aa22.38■■□□□ 1.17
TARDBP-231ENST00000639599 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
TARDBP-231ENST00000639599 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
TARDBP-231ENST00000639599 NKTRP30414 1462 aaKnown RBP22.37■■□□□ 1.17
TARDBP-231ENST00000639599 RBM33Q96EV2 1170 aaKnown RBP22.37■■□□□ 1.17
TARDBP-231ENST00000639599 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
TARDBP-231ENST00000639599 UNC13BO14795 1591 aa22.36■■□□□ 1.17
TARDBP-231ENST00000639599 FAM135BQ49AJ0 1406 aa22.34■■□□□ 1.17
TARDBP-231ENST00000639599 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
TARDBP-231ENST00000639599 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
TARDBP-231ENST00000639599 NUTM2DQ5VT03 806 aaPredicted RBP22.31■■□□□ 1.16
TARDBP-231ENST00000639599 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
TARDBP-231ENST00000639599 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
TARDBP-231ENST00000639599 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
TARDBP-231ENST00000639599 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
TARDBP-231ENST00000639599 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
TARDBP-231ENST00000639599 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
TARDBP-231ENST00000639599 E9PCH4 1651 aa22.25■■□□□ 1.15
TARDBP-231ENST00000639599 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
TARDBP-231ENST00000639599 DIP2AQ14689 1571 aa22.22■■□□□ 1.15
TARDBP-231ENST00000639599 ATF3P18847 181 aa22.22■■□□□ 1.15
TARDBP-231ENST00000639599 PIK3R4Q99570 1358 aa22.22■■□□□ 1.15
TARDBP-231ENST00000639599 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
TARDBP-231ENST00000639599 NCOA3Q9Y6Q9 1424 aa22.21■■□□□ 1.15
TARDBP-231ENST00000639599 CADPS2Q86UW7 1296 aa22.2■■□□□ 1.14
TARDBP-231ENST00000639599 MYO5BQ9ULV0 1848 aa22.19■■□□□ 1.14
TARDBP-231ENST00000639599 TRPM2O94759 1503 aa22.18■■□□□ 1.14
TARDBP-231ENST00000639599 ADAMTS13Q76LX8 1427 aa22.18■■□□□ 1.14
TARDBP-231ENST00000639599 C19orf44Q9H6X5 657 aa22.17■■□□□ 1.14
TARDBP-231ENST00000639599 AMOTL2Q9Y2J4 779 aa22.17■■□□□ 1.14
TARDBP-231ENST00000639599 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
TARDBP-231ENST00000639599 JCADQ9P266 1359 aa22.15■■□□□ 1.14
TARDBP-231ENST00000639599 CHD2O14647 1828 aaKnown RBP22.13■■□□□ 1.13
TARDBP-231ENST00000639599 RRBP1Q9P2E9 1410 aaKnown RBP22.13■■□□□ 1.13
TARDBP-231ENST00000639599 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
TARDBP-231ENST00000639599 PHLPP1O60346 1717 aa22.1■■□□□ 1.13
TARDBP-231ENST00000639599 RGS17Q9UGC6 210 aaPredicted RBP22.1■■□□□ 1.13
TARDBP-231ENST00000639599 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
TARDBP-231ENST00000639599 NAIPQ13075 1403 aa22.07■■□□□ 1.12
TARDBP-231ENST00000639599 SPATA31A6Q5VVP1 1343 aa22.06■■□□□ 1.12
TARDBP-231ENST00000639599 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
TARDBP-231ENST00000639599 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
TARDBP-231ENST00000639599 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
TARDBP-231ENST00000639599 DCCP43146 1447 aa22.04■■□□□ 1.12
TARDBP-231ENST00000639599 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
TARDBP-231ENST00000639599 VGFO15240 615 aaPredicted RBP22.02■■□□□ 1.12
TARDBP-231ENST00000639599 METP08581 1390 aa22.01■■□□□ 1.11
TARDBP-231ENST00000639599 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
TARDBP-231ENST00000639599 HFM1A2PYH4 1435 aa22.01■■□□□ 1.11
TARDBP-231ENST00000639599 BRINP3Q76B58 766 aa22.01■■□□□ 1.11
TARDBP-231ENST00000639599 CLTCL1P53675 1640 aa22■■□□□ 1.11
TARDBP-231ENST00000639599 COL16A1Q07092 1604 aaPredicted RBP21.99■■□□□ 1.11
TARDBP-231ENST00000639599 ZNF772Q68DY9 489 aaPredicted RBP21.98■■□□□ 1.11
TARDBP-231ENST00000639599 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
TARDBP-231ENST00000639599 NEXMIFQ5QGS0 1516 aa21.97■■□□□ 1.11
TARDBP-231ENST00000639599 NUTM2BA6NNL0 878 aaPredicted RBP21.97■■□□□ 1.11
TARDBP-231ENST00000639599 NUTM2EB1AL46 878 aaPredicted RBP21.97■■□□□ 1.11
TARDBP-231ENST00000639599 NUTM2AQ8IVF1 878 aaPredicted RBP21.97■■□□□ 1.11
TARDBP-231ENST00000639599 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
TARDBP-231ENST00000639599 RPGRIP1LQ68CZ1 1315 aa21.96■■□□□ 1.11
TARDBP-231ENST00000639599 XRN1Q8IZH2 1706 aaKnown RBP21.95■■□□□ 1.1
TARDBP-231ENST00000639599 ADGRL3Q9HAR2 1447 aa21.95■■□□□ 1.1
TARDBP-231ENST00000639599 ASXL1Q8IXJ9 1541 aa21.94■■□□□ 1.1
TARDBP-231ENST00000639599 MST1RQ04912 1400 aa21.93■■□□□ 1.1
TARDBP-231ENST00000639599 KIF1BO60333 1816 aa21.92■■□□□ 1.1
TARDBP-231ENST00000639599 LRRC59Q96AG4 307 aaKnown RBP21.92■■□□□ 1.1
TARDBP-231ENST00000639599 LRP6O75581 1613 aa21.91■■□□□ 1.1
TARDBP-231ENST00000639599 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.1
TARDBP-231ENST00000639599 PTCH1Q13635 1447 aa21.89■■□□□ 1.09
TARDBP-231ENST00000639599 FOXD1Q16676 465 aa21.87■■□□□ 1.09
TARDBP-231ENST00000639599 SHPRHQ149N8 1683 aa21.87■■□□□ 1.09
TARDBP-231ENST00000639599 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
TARDBP-231ENST00000639599 RXRBP28702 533 aa21.85■■□□□ 1.09
TARDBP-231ENST00000639599 RGL3Q3MIN7 710 aa21.84■■□□□ 1.09
TARDBP-231ENST00000639599 ROBO2Q9HCK4 1378 aa21.84■■□□□ 1.09
TARDBP-231ENST00000639599 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.09
TARDBP-231ENST00000639599 DDX17Q92841 729 aaKnown RBP21.83■■□□□ 1.09
TARDBP-231ENST00000639599 C8orf37Q96NL8 207 aa21.83■■□□□ 1.09
TARDBP-231ENST00000639599 AFF2P51816 1311 aa21.81■■□□□ 1.08
TARDBP-231ENST00000639599 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
TARDBP-231ENST00000639599 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
TARDBP-231ENST00000639599 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
TARDBP-231ENST00000639599 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
TARDBP-231ENST00000639599 ANKRD30BQ9BXX2 1392 aa21.79■■□□□ 1.08
TARDBP-231ENST00000639599 STK26Q9P289 416 aa21.79■■□□□ 1.08
TARDBP-231ENST00000639599 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
TARDBP-231ENST00000639599 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
TARDBP-231ENST00000639599 ADAMTS2O95450 1211 aa21.77■■□□□ 1.08
TARDBP-231ENST00000639599 ADGRF5Q8IZF2 1346 aa21.77■■□□□ 1.07
TARDBP-231ENST00000639599 ESCO1Q5FWF5 840 aa21.76■■□□□ 1.07
TARDBP-231ENST00000639599 PRAG1Q86YV5 1406 aa21.76■■□□□ 1.07
TARDBP-231ENST00000639599 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
TARDBP-231ENST00000639599 SETD1AO15047 1707 aaKnown RBP21.75■■□□□ 1.07
TARDBP-231ENST00000639599 NPHP3Q7Z494 1330 aa21.74■■□□□ 1.07
TARDBP-231ENST00000639599 PPLO60437 1756 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms