RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 TMF1P82094 1093 aa19.94■□□□□ 0.78
CHD1L-211ENST00000639534 KIF13AQ9H1H9 1805 aa19.94■□□□□ 0.78
CHD1L-211ENST00000639534 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
CHD1L-211ENST00000639534 CDCA8Q53HL2 280 aa19.91■□□□□ 0.78
CHD1L-211ENST00000639534 TESK2Q96S53 571 aa19.91■□□□□ 0.78
CHD1L-211ENST00000639534 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
CHD1L-211ENST00000639534 SYNMO15061 1565 aa19.89■□□□□ 0.77
CHD1L-211ENST00000639534 PPLO60437 1756 aa19.89■□□□□ 0.77
CHD1L-211ENST00000639534 ARHGEF40Q8TER5 1519 aa19.89■□□□□ 0.77
CHD1L-211ENST00000639534 SLC52A1Q9NWF4 448 aa19.89■□□□□ 0.77
CHD1L-211ENST00000639534 SIGLEC1Q9BZZ2 1709 aa19.88■□□□□ 0.77
CHD1L-211ENST00000639534 PREX1Q8TCU6 1659 aa19.85■□□□□ 0.77
CHD1L-211ENST00000639534 RALBP1Q15311 655 aa19.85■□□□□ 0.77
CHD1L-211ENST00000639534 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
CHD1L-211ENST00000639534 CHGAP10645 457 aaKnown RBP19.84■□□□□ 0.77
CHD1L-211ENST00000639534 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
CHD1L-211ENST00000639534 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
CHD1L-211ENST00000639534 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.77
CHD1L-211ENST00000639534 MYO3AQ8NEV4 1616 aa19.82■□□□□ 0.76
CHD1L-211ENST00000639534 ZFYVE9O95405 1425 aa19.82■□□□□ 0.76
CHD1L-211ENST00000639534 VGFO15240 615 aaPredicted RBP19.81■□□□□ 0.76
CHD1L-211ENST00000639534 NEXMIFQ5QGS0 1516 aa19.8■□□□□ 0.76
CHD1L-211ENST00000639534 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
CHD1L-211ENST00000639534 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
CHD1L-211ENST00000639534 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
CHD1L-211ENST00000639534 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
CHD1L-211ENST00000639534 MYBBP1AQ9BQG0 1328 aaKnown RBP19.77■□□□□ 0.76
CHD1L-211ENST00000639534 KDM5AP29375 1690 aaKnown RBP19.76■□□□□ 0.75
CHD1L-211ENST00000639534 BRD4O60885 1362 aaPredicted RBP19.76■□□□□ 0.75
CHD1L-211ENST00000639534 TMEM131LA2VDJ0 1609 aa19.76■□□□□ 0.75
CHD1L-211ENST00000639534 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
CHD1L-211ENST00000639534 IDI1Q13907 227 aa19.75■□□□□ 0.75
CHD1L-211ENST00000639534 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
CHD1L-211ENST00000639534 SPATA31D1Q6ZQQ2 1576 aa19.74■□□□□ 0.75
CHD1L-211ENST00000639534 CFAP65Q6ZU64 1925 aaKnown RBP19.74■□□□□ 0.75
CHD1L-211ENST00000639534 PARD3Q8TEW0 1356 aa19.74■□□□□ 0.75
CHD1L-211ENST00000639534 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
CHD1L-211ENST00000639534 PER1O15534 1290 aaPredicted RBP19.73■□□□□ 0.75
CHD1L-211ENST00000639534 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
CHD1L-211ENST00000639534 TMC1Q8TDI8 760 aa19.7■□□□□ 0.74
CHD1L-211ENST00000639534 PANK3Q9H999 370 aa19.7■□□□□ 0.74
CHD1L-211ENST00000639534 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
CHD1L-211ENST00000639534 NLRP13Q86W25 1043 aa19.69■□□□□ 0.74
CHD1L-211ENST00000639534 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
CHD1L-211ENST00000639534 ESF1Q9H501 851 aaKnown RBP19.69■□□□□ 0.74
CHD1L-211ENST00000639534 ZBED9Q6R2W3 1325 aa19.68■□□□□ 0.74
CHD1L-211ENST00000639534 NPC1L1Q9UHC9 1359 aa19.67■□□□□ 0.74
CHD1L-211ENST00000639534 MYOM1P52179 1685 aa19.66■□□□□ 0.74
CHD1L-211ENST00000639534 PUS7Q96PZ0 661 aaKnown RBP19.66■□□□□ 0.74
CHD1L-211ENST00000639534 KNSTRNQ9Y448 316 aa19.65■□□□□ 0.74
CHD1L-211ENST00000639534 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
CHD1L-211ENST00000639534 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
CHD1L-211ENST00000639534 INSRP06213 1382 aa19.64■□□□□ 0.73
CHD1L-211ENST00000639534 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
CHD1L-211ENST00000639534 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
CHD1L-211ENST00000639534 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
CHD1L-211ENST00000639534 LRPPRCP42704 1394 aaKnown RBP19.62■□□□□ 0.73
CHD1L-211ENST00000639534 MYO5BQ9ULV0 1848 aa19.62■□□□□ 0.73
CHD1L-211ENST00000639534 NEFLP07196 543 aa19.61■□□□□ 0.73
CHD1L-211ENST00000639534 A2ML1A8K2U0 1454 aa19.6■□□□□ 0.73
CHD1L-211ENST00000639534 ZMYM3Q14202 1370 aa19.6■□□□□ 0.73
CHD1L-211ENST00000639534 ARHGEF28Q8N1W1 1705 aaKnown RBP19.6■□□□□ 0.73
CHD1L-211ENST00000639534 TRAK1Q9UPV9 953 aa19.6■□□□□ 0.73
CHD1L-211ENST00000639534 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
CHD1L-211ENST00000639534 MLECQ14165 292 aa19.59■□□□□ 0.73
CHD1L-211ENST00000639534 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.58■□□□□ 0.72
CHD1L-211ENST00000639534 EVC2Q86UK5 1308 aa19.56■□□□□ 0.72
CHD1L-211ENST00000639534 HDGFP51858 240 aaKnown RBP19.56■□□□□ 0.72
CHD1L-211ENST00000639534 CC2D1BQ5T0F9 858 aaKnown RBP19.56■□□□□ 0.72
CHD1L-211ENST00000639534 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
CHD1L-211ENST00000639534 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
CHD1L-211ENST00000639534 RIMS2Q9UQ26 1411 aa19.56■□□□□ 0.72
CHD1L-211ENST00000639534 ALKQ9UM73 1620 aa19.55■□□□□ 0.72
CHD1L-211ENST00000639534 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
CHD1L-211ENST00000639534 TNRQ92752 1358 aa19.54■□□□□ 0.72
CHD1L-211ENST00000639534 NINLQ9Y2I6 1382 aa19.53■□□□□ 0.72
CHD1L-211ENST00000639534 YTHDC2Q9H6S0 1430 aaKnown RBP19.52■□□□□ 0.72
CHD1L-211ENST00000639534 DLC1Q96QB1 1528 aa19.52■□□□□ 0.72
CHD1L-211ENST00000639534 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
CHD1L-211ENST00000639534 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
CHD1L-211ENST00000639534 PTPRMP28827 1452 aa19.5■□□□□ 0.71
CHD1L-211ENST00000639534 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
CHD1L-211ENST00000639534 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
CHD1L-211ENST00000639534 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
CHD1L-211ENST00000639534 SMG6Q86US8 1419 aaKnown RBP19.49■□□□□ 0.71
CHD1L-211ENST00000639534 PPP2R1AP30153 589 aa19.47■□□□□ 0.71
CHD1L-211ENST00000639534 BLMP54132 1417 aaPredicted RBP19.46■□□□□ 0.71
CHD1L-211ENST00000639534 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
CHD1L-211ENST00000639534 ATAD2Q6PL18 1390 aa19.45■□□□□ 0.7
CHD1L-211ENST00000639534 FKBP8Q14318 412 aa19.45■□□□□ 0.7
CHD1L-211ENST00000639534 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
CHD1L-211ENST00000639534 NSD2O96028 1365 aa19.44■□□□□ 0.7
CHD1L-211ENST00000639534 POGKQ9P215 609 aa19.44■□□□□ 0.7
CHD1L-211ENST00000639534 UBR1Q8IWV7 1749 aa19.44■□□□□ 0.7
CHD1L-211ENST00000639534 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
CHD1L-211ENST00000639534 TRHP20396 242 aaPredicted RBP19.43■□□□□ 0.7
CHD1L-211ENST00000639534 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
CHD1L-211ENST00000639534 ABCC11Q96J66 1382 aa19.43■□□□□ 0.7
CHD1L-211ENST00000639534 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
CHD1L-211ENST00000639534 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms