RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, humanhuman

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-222ENST00000639447 PPP1R15AO75807 674 aaPredicted RBP22.51■■□□□ 1.19
GRN-222ENST00000639447 BCANQ96GW7 911 aa22.51■■□□□ 1.19
GRN-222ENST00000639447 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
GRN-222ENST00000639447 RIMS2Q9UQ26 1411 aa22.51■■□□□ 1.19
GRN-222ENST00000639447 NUP155O75694 1391 aa22.49■■□□□ 1.19
GRN-222ENST00000639447 XIRP1Q702N8 1843 aaKnown RBP22.49■■□□□ 1.19
GRN-222ENST00000639447 TMEM94Q12767 1356 aa22.49■■□□□ 1.19
GRN-222ENST00000639447 PLEKHG1Q9ULL1 1385 aa22.49■■□□□ 1.19
GRN-222ENST00000639447 KCNA6P17658 529 aa22.48■■□□□ 1.19
GRN-222ENST00000639447 MYO5BQ9ULV0 1848 aa22.47■■□□□ 1.19
GRN-222ENST00000639447 SOCS7O14512 581 aa22.47■■□□□ 1.19
GRN-222ENST00000639447 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
GRN-222ENST00000639447 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
GRN-222ENST00000639447 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
GRN-222ENST00000639447 RRBP1Q9P2E9 1410 aaKnown RBP22.44■■□□□ 1.18
GRN-222ENST00000639447 PROSER2Q86WR7 435 aaPredicted RBP22.42■■□□□ 1.18
GRN-222ENST00000639447 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.42■■□□□ 1.18
GRN-222ENST00000639447 DIP2AQ14689 1571 aa22.41■■□□□ 1.18
GRN-222ENST00000639447 SPHKAPQ2M3C7 1700 aa22.38■■□□□ 1.17
GRN-222ENST00000639447 MSH6P52701 1360 aa22.38■■□□□ 1.17
GRN-222ENST00000639447 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
GRN-222ENST00000639447 FAM135BQ49AJ0 1406 aa22.37■■□□□ 1.17
GRN-222ENST00000639447 RBM33Q96EV2 1170 aaKnown RBP22.36■■□□□ 1.17
GRN-222ENST00000639447 ADAMTS13Q76LX8 1427 aa22.35■■□□□ 1.17
GRN-222ENST00000639447 NUTM2DQ5VT03 806 aaPredicted RBP22.34■■□□□ 1.17
GRN-222ENST00000639447 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
GRN-222ENST00000639447 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
GRN-222ENST00000639447 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
GRN-222ENST00000639447 TRPM2O94759 1503 aa22.33■■□□□ 1.17
GRN-222ENST00000639447 NAIPQ13075 1403 aa22.33■■□□□ 1.16
GRN-222ENST00000639447 PIK3R4Q99570 1358 aa22.31■■□□□ 1.16
GRN-222ENST00000639447 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
GRN-222ENST00000639447 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
GRN-222ENST00000639447 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
GRN-222ENST00000639447 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
GRN-222ENST00000639447 C14orf37Q86TY3 774 aa22.27■■□□□ 1.16
GRN-222ENST00000639447 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
GRN-222ENST00000639447 NRXN3Q9Y4C0 1643 aa22.24■■□□□ 1.15
GRN-222ENST00000639447 SLAIN2Q9P270 581 aa22.23■■□□□ 1.15
GRN-222ENST00000639447 NEXMIFQ5QGS0 1516 aa22.22■■□□□ 1.15
GRN-222ENST00000639447 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
GRN-222ENST00000639447 XRN1Q8IZH2 1706 aaKnown RBP22.21■■□□□ 1.15
GRN-222ENST00000639447 PHLPP1O60346 1717 aa22.2■■□□□ 1.15
GRN-222ENST00000639447 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
GRN-222ENST00000639447 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
GRN-222ENST00000639447 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.18■■□□□ 1.14
GRN-222ENST00000639447 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
GRN-222ENST00000639447 KIF1BO60333 1816 aa22.17■■□□□ 1.14
GRN-222ENST00000639447 ATF3P18847 181 aa22.17■■□□□ 1.14
GRN-222ENST00000639447 C19orf44Q9H6X5 657 aa22.16■■□□□ 1.14
GRN-222ENST00000639447 COL16A1Q07092 1604 aaPredicted RBP22.16■■□□□ 1.14
GRN-222ENST00000639447 DCCP43146 1447 aa22.15■■□□□ 1.14
GRN-222ENST00000639447 JCADQ9P266 1359 aa22.15■■□□□ 1.14
GRN-222ENST00000639447 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.14
GRN-222ENST00000639447 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
GRN-222ENST00000639447 METP08581 1390 aa22.13■■□□□ 1.13
GRN-222ENST00000639447 RGS17Q9UGC6 210 aaPredicted RBP22.09■■□□□ 1.13
GRN-222ENST00000639447 ADGRL3Q9HAR2 1447 aa22.08■■□□□ 1.13
GRN-222ENST00000639447 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
GRN-222ENST00000639447 MST1RQ04912 1400 aa22.06■■□□□ 1.12
GRN-222ENST00000639447 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
GRN-222ENST00000639447 VGFO15240 615 aaPredicted RBP22.06■■□□□ 1.12
GRN-222ENST00000639447 NALCNQ8IZF0 1738 aa22.05■■□□□ 1.12
GRN-222ENST00000639447 RPGRIP1LQ68CZ1 1315 aa22.05■■□□□ 1.12
GRN-222ENST00000639447 SETD1AO15047 1707 aaKnown RBP22.04■■□□□ 1.12
GRN-222ENST00000639447 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
GRN-222ENST00000639447 SHPRHQ149N8 1683 aa22.03■■□□□ 1.12
GRN-222ENST00000639447 CCDC144AA2RUR9 1427 aa22.03■■□□□ 1.12
GRN-222ENST00000639447 PPLO60437 1756 aa22.03■■□□□ 1.12
GRN-222ENST00000639447 SPATA31A6Q5VVP1 1343 aa22.03■■□□□ 1.12
GRN-222ENST00000639447 LRP6O75581 1613 aa22.02■■□□□ 1.11
GRN-222ENST00000639447 PRAG1Q86YV5 1406 aa22■■□□□ 1.11
GRN-222ENST00000639447 FOXD1Q16676 465 aa22■■□□□ 1.11
GRN-222ENST00000639447 NHSL1Q5SYE7 1610 aa21.99■■□□□ 1.11
GRN-222ENST00000639447 POTEAQ6S8J7 498 aa21.99■■□□□ 1.11
GRN-222ENST00000639447 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
GRN-222ENST00000639447 ROBO2Q9HCK4 1378 aa21.97■■□□□ 1.11
GRN-222ENST00000639447 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
GRN-222ENST00000639447 MPHOSPH9Q99550 1183 aa21.94■■□□□ 1.1
GRN-222ENST00000639447 SPATA31E1Q6ZUB1 1445 aa21.94■■□□□ 1.1
GRN-222ENST00000639447 C1orf167Q5SNV9 1468 aa21.93■■□□□ 1.1
GRN-222ENST00000639447 ANKRD30BQ9BXX2 1392 aa21.92■■□□□ 1.1
GRN-222ENST00000639447 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
GRN-222ENST00000639447 IFT172Q9UG01 1749 aa21.91■■□□□ 1.1
GRN-222ENST00000639447 RGL3Q3MIN7 710 aa21.89■■□□□ 1.1
GRN-222ENST00000639447 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.09
GRN-222ENST00000639447 CDC42BPGQ6DT37 1551 aa21.89■■□□□ 1.09
GRN-222ENST00000639447 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
GRN-222ENST00000639447 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
GRN-222ENST00000639447 ZNF772Q68DY9 489 aaPredicted RBP21.88■■□□□ 1.09
GRN-222ENST00000639447 NUTM2AQ8IVF1 878 aaPredicted RBP21.88■■□□□ 1.09
GRN-222ENST00000639447 LRRC59Q96AG4 307 aaKnown RBP21.87■■□□□ 1.09
GRN-222ENST00000639447 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
GRN-222ENST00000639447 TECPR2O15040 1411 aa21.86■■□□□ 1.09
GRN-222ENST00000639447 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
GRN-222ENST00000639447 LAMC1P11047 1609 aa21.86■■□□□ 1.09
GRN-222ENST00000639447 DDX17Q92841 729 aaKnown RBP21.85■■□□□ 1.09
GRN-222ENST00000639447 KNDC1Q76NI1 1749 aa21.84■■□□□ 1.09
GRN-222ENST00000639447 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.09
GRN-222ENST00000639447 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms