RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMG7-216ENST00000638826 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
SMG7-216ENST00000638826 TET3O43151 1660 aa12.89□□□□□ -0.35
SMG7-216ENST00000638826 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
SMG7-216ENST00000638826 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
SMG7-216ENST00000638826 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
SMG7-216ENST00000638826 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
SMG7-216ENST00000638826 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
SMG7-216ENST00000638826 RIMS2Q9UQ26 1411 aa12.86□□□□□ -0.35
SMG7-216ENST00000638826 NCOA3Q9Y6Q9 1424 aa12.86□□□□□ -0.35
SMG7-216ENST00000638826 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
SMG7-216ENST00000638826 JCADQ9P266 1359 aa12.84□□□□□ -0.35
SMG7-216ENST00000638826 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
SMG7-216ENST00000638826 C14orf37Q86TY3 774 aa12.83□□□□□ -0.36
SMG7-216ENST00000638826 CFAP65Q6ZU64 1925 aaKnown RBP12.83□□□□□ -0.36
SMG7-216ENST00000638826 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
SMG7-216ENST00000638826 PIK3R4Q99570 1358 aa12.82□□□□□ -0.36
SMG7-216ENST00000638826 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
SMG7-216ENST00000638826 POTEAQ6S8J7 498 aa12.81□□□□□ -0.36
SMG7-216ENST00000638826 C19orf44Q9H6X5 657 aa12.81□□□□□ -0.36
SMG7-216ENST00000638826 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
SMG7-216ENST00000638826 ATF3P18847 181 aa12.8□□□□□ -0.36
SMG7-216ENST00000638826 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
SMG7-216ENST00000638826 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
SMG7-216ENST00000638826 NUP155O75694 1391 aa12.78□□□□□ -0.36
SMG7-216ENST00000638826 DIP2AQ14689 1571 aa12.77□□□□□ -0.36
SMG7-216ENST00000638826 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.36
SMG7-216ENST00000638826 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
SMG7-216ENST00000638826 UNC13BO14795 1591 aa12.77□□□□□ -0.37
SMG7-216ENST00000638826 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
SMG7-216ENST00000638826 NUTM2DQ5VT03 806 aaPredicted RBP12.76□□□□□ -0.37
SMG7-216ENST00000638826 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
SMG7-216ENST00000638826 AMOTL2Q9Y2J4 779 aa12.76□□□□□ -0.37
SMG7-216ENST00000638826 DCCP43146 1447 aa12.73□□□□□ -0.37
SMG7-216ENST00000638826 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
SMG7-216ENST00000638826 TRPM2O94759 1503 aa12.72□□□□□ -0.37
SMG7-216ENST00000638826 ITGAEP38570 1179 aa12.72□□□□□ -0.37
SMG7-216ENST00000638826 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
SMG7-216ENST00000638826 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.37
SMG7-216ENST00000638826 BRINP3Q76B58 766 aa12.71□□□□□ -0.37
SMG7-216ENST00000638826 PHLPP1O60346 1717 aa12.71□□□□□ -0.38
SMG7-216ENST00000638826 CHD2O14647 1828 aaKnown RBP12.7□□□□□ -0.38
SMG7-216ENST00000638826 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
SMG7-216ENST00000638826 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
SMG7-216ENST00000638826 PTPRUQ92729 1446 aa12.69□□□□□ -0.38
SMG7-216ENST00000638826 E9PCH4 1651 aa12.68□□□□□ -0.38
SMG7-216ENST00000638826 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
SMG7-216ENST00000638826 LRP6O75581 1613 aa12.67□□□□□ -0.38
SMG7-216ENST00000638826 RXRBP28702 533 aa12.67□□□□□ -0.38
SMG7-216ENST00000638826 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
SMG7-216ENST00000638826 SETD5Q9C0A6 1442 aa12.66□□□□□ -0.38
SMG7-216ENST00000638826 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
SMG7-216ENST00000638826 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
SMG7-216ENST00000638826 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
SMG7-216ENST00000638826 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
SMG7-216ENST00000638826 METP08581 1390 aa12.65□□□□□ -0.38
SMG7-216ENST00000638826 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
SMG7-216ENST00000638826 MST1RQ04912 1400 aa12.64□□□□□ -0.39
SMG7-216ENST00000638826 ADGRL3Q9HAR2 1447 aa12.64□□□□□ -0.39
SMG7-216ENST00000638826 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
SMG7-216ENST00000638826 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
SMG7-216ENST00000638826 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMG7-216ENST00000638826 CDK12Q9NYV4 1490 aaPredicted RBP12.63□□□□□ -0.39
SMG7-216ENST00000638826 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
SMG7-216ENST00000638826 SHPRHQ149N8 1683 aa12.62□□□□□ -0.39
SMG7-216ENST00000638826 AFF2P51816 1311 aa12.62□□□□□ -0.39
SMG7-216ENST00000638826 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
SMG7-216ENST00000638826 XRN1Q8IZH2 1706 aaKnown RBP12.6□□□□□ -0.39
SMG7-216ENST00000638826 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
SMG7-216ENST00000638826 PTCH1Q13635 1447 aa12.6□□□□□ -0.39
SMG7-216ENST00000638826 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
SMG7-216ENST00000638826 C8orf37Q96NL8 207 aa12.59□□□□□ -0.39
SMG7-216ENST00000638826 NRXN3Q9Y4C0 1643 aa12.59□□□□□ -0.39
SMG7-216ENST00000638826 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.4
SMG7-216ENST00000638826 NAIPQ13075 1403 aa12.58□□□□□ -0.4
SMG7-216ENST00000638826 QTRT2Q9H974 415 aaKnown RBP12.58□□□□□ -0.4
SMG7-216ENST00000638826 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
SMG7-216ENST00000638826 C1orf167Q5SNV9 1468 aa12.58□□□□□ -0.4
SMG7-216ENST00000638826 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
SMG7-216ENST00000638826 NGLY1Q96IV0 654 aa12.57□□□□□ -0.4
SMG7-216ENST00000638826 SPHKAPQ2M3C7 1700 aa12.57□□□□□ -0.4
SMG7-216ENST00000638826 PRAG1Q86YV5 1406 aa12.56□□□□□ -0.4
SMG7-216ENST00000638826 DDX17Q92841 729 aaKnown RBP12.56□□□□□ -0.4
SMG7-216ENST00000638826 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
SMG7-216ENST00000638826 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
SMG7-216ENST00000638826 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
SMG7-216ENST00000638826 SETD1AO15047 1707 aaKnown RBP12.55□□□□□ -0.4
SMG7-216ENST00000638826 ADAMTS2O95450 1211 aa12.55□□□□□ -0.4
SMG7-216ENST00000638826 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
SMG7-216ENST00000638826 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
SMG7-216ENST00000638826 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
SMG7-216ENST00000638826 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
SMG7-216ENST00000638826 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
SMG7-216ENST00000638826 FOXD1Q16676 465 aa12.52□□□□□ -0.41
SMG7-216ENST00000638826 USP21Q9UK80 565 aa12.52□□□□□ -0.41
SMG7-216ENST00000638826 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.41
SMG7-216ENST00000638826 RGS12O14924 1447 aa12.52□□□□□ -0.41
SMG7-216ENST00000638826 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
SMG7-216ENST00000638826 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
SMG7-216ENST00000638826 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms