RNA–Protein interactions for RNA: ENST00000638790.1

MED17-216, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-216	ENST00000638790	NEXMIF	Q5QGS0	1516 aa		32.7	■■■□□ 2.83
MED17-216	ENST00000638790	FER1L4	A9Z1Z3	1794 aa		32.69	■■■□□ 2.82
MED17-216	ENST00000638790	KIAA1210	Q9ULL0	1709 aa		32.68	■■■□□ 2.82
MED17-216	ENST00000638790	MYO5B	Q9ULV0	1848 aa		32.65	■■■□□ 2.82
MED17-216	ENST00000638790	TNR	Q92752	1358 aa		32.65	■■■□□ 2.82
MED17-216	ENST00000638790	ZFYVE9	O95405	1425 aa		32.64	■■■□□ 2.82
MED17-216	ENST00000638790	PIK3C2G	O75747	1445 aa		32.64	■■■□□ 2.81
MED17-216	ENST00000638790	C3	P01024	1663 aa		32.63	■■■□□ 2.81
MED17-216	ENST00000638790	A2ML1	A8K2U0	1454 aa		32.62	■■■□□ 2.81
MED17-216	ENST00000638790	VGF	O15240	615 aa	Predicted RBP	32.6	■■■□□ 2.81
MED17-216	ENST00000638790	CEBPA	P49715	358 aa	Predicted RBP	32.59	■■■□□ 2.81
MED17-216	ENST00000638790	WASHC2A	Q641Q2	1341 aa		32.59	■■■□□ 2.81
MED17-216	ENST00000638790	C11orf95	C9JLR9	678 aa	Predicted RBP	32.59	■■■□□ 2.81
MED17-216	ENST00000638790	CFAP70	Q5T0N1	1121 aa		32.58	■■■□□ 2.81
MED17-216	ENST00000638790	ADAMTSL3	P82987	1691 aa		32.57	■■■□□ 2.8
MED17-216	ENST00000638790	ST20-MTHFS	A0A0A6YYL1	179 aa		32.56	■■■□□ 2.8
MED17-216	ENST00000638790	C14orf93	Q9H972	538 aa	Known RBP	32.54	■■■□□ 2.8
MED17-216	ENST00000638790	KDM5A	P29375	1690 aa	Known RBP	32.54	■■■□□ 2.8
MED17-216	ENST00000638790	STAG3	Q9UJ98	1225 aa		32.54	■■■□□ 2.8
MED17-216	ENST00000638790	DDX10	Q13206	875 aa	Known RBP	32.52	■■■□□ 2.8
MED17-216	ENST00000638790	NLRP1	Q9C000	1473 aa		32.52	■■■□□ 2.8
MED17-216	ENST00000638790	IQGAP1	P46940	1657 aa		32.52	■■■□□ 2.8
MED17-216	ENST00000638790	SETBP1	Q9Y6X0	1596 aa		32.51	■■■□□ 2.8
MED17-216	ENST00000638790	CCDC7	Q96M83	1385 aa		32.51	■■■□□ 2.8
MED17-216	ENST00000638790	SCAF11	Q99590	1463 aa	Known RBP	32.51	■■■□□ 2.79
MED17-216	ENST00000638790	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.5	■■■□□ 2.79
MED17-216	ENST00000638790	POLR1A	O95602	1720 aa	Predicted RBP	32.49	■■■□□ 2.79
MED17-216	ENST00000638790	KIF7	Q2M1P5	1343 aa		32.47	■■■□□ 2.79
MED17-216	ENST00000638790	ADGRB1	O14514	1584 aa		32.47	■■■□□ 2.79
MED17-216	ENST00000638790	RIMS1	Q86UR5	1692 aa	Known RBP	32.46	■■■□□ 2.79
MED17-216	ENST00000638790	RIMS2	Q9UQ26	1411 aa		32.46	■■■□□ 2.79
MED17-216	ENST00000638790	UBR1	Q8IWV7	1749 aa		32.46	■■■□□ 2.79
MED17-216	ENST00000638790	TESK2	Q96S53	571 aa		32.44	■■■□□ 2.78
MED17-216	ENST00000638790	TMEM2	Q9UHN6	1383 aa		32.38	■■■□□ 2.77
MED17-216	ENST00000638790	MIER1	Q8N108	512 aa		32.38	■■■□□ 2.77
MED17-216	ENST00000638790	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.37	■■■□□ 2.77
MED17-216	ENST00000638790	EIF3A	Q14152	1382 aa	Known RBP	32.35	■■■□□ 2.77
MED17-216	ENST00000638790	MYO3A	Q8NEV4	1616 aa		32.34	■■■□□ 2.77
MED17-216	ENST00000638790	TMEM132E	Q6IEE7	984 aa		32.33	■■■□□ 2.77
MED17-216	ENST00000638790	PLPPR3	Q6T4P5	718 aa		32.33	■■■□□ 2.77
MED17-216	ENST00000638790	ASXL1	Q8IXJ9	1541 aa		32.33	■■■□□ 2.77
MED17-216	ENST00000638790	ALK	Q9UM73	1620 aa		32.32	■■■□□ 2.76
MED17-216	ENST00000638790	HDGF	P51858	240 aa	Known RBP	32.31	■■■□□ 2.76
MED17-216	ENST00000638790	ARHGAP23	Q9P227	1491 aa		32.29	■■■□□ 2.76
MED17-216	ENST00000638790	SLIT1	O75093	1534 aa		32.29	■■■□□ 2.76
MED17-216	ENST00000638790	DISP3	Q9P2K9	1392 aa		32.27	■■■□□ 2.76
MED17-216	ENST00000638790	NRXN3	Q9Y4C0	1643 aa		32.27	■■■□□ 2.76
MED17-216	ENST00000638790	PTPRM	P28827	1452 aa		32.26	■■■□□ 2.75
MED17-216	ENST00000638790	SETD1A	O15047	1707 aa	Known RBP	32.25	■■■□□ 2.75
MED17-216	ENST00000638790	SBNO2	Q9Y2G9	1366 aa		32.24	■■■□□ 2.75
MED17-216	ENST00000638790	TMF1	P82094	1093 aa		32.24	■■■□□ 2.75
MED17-216	ENST00000638790	TRAK1	Q9UPV9	953 aa		32.24	■■■□□ 2.75
MED17-216	ENST00000638790	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.24	■■■□□ 2.75
MED17-216	ENST00000638790	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.23	■■■□□ 2.75
MED17-216	ENST00000638790	LTK	P29376	864 aa		32.22	■■■□□ 2.75
MED17-216	ENST00000638790	SLC24A1	O60721	1099 aa		32.2	■■■□□ 2.74
MED17-216	ENST00000638790	SENP3	Q9H4L4	574 aa	Predicted RBP	32.2	■■■□□ 2.74
MED17-216	ENST00000638790	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.19	■■■□□ 2.74
MED17-216	ENST00000638790	SETD1B	Q9UPS6	1966 aa	Known RBP	32.19	■■■□□ 2.74
MED17-216	ENST00000638790	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.19	■■■□□ 2.74
MED17-216	ENST00000638790	PLEKHG1	Q9ULL1	1385 aa		32.18	■■■□□ 2.74
MED17-216	ENST00000638790	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.18	■■■□□ 2.74
MED17-216	ENST00000638790	ZNF142	P52746	1687 aa	Predicted RBP	32.18	■■■□□ 2.74
MED17-216	ENST00000638790	TXNDC2	Q86VQ3	553 aa		32.16	■■■□□ 2.74
MED17-216	ENST00000638790	POLR3GL	Q9BT43	218 aa		32.16	■■■□□ 2.74
MED17-216	ENST00000638790	ADAMTS13	Q76LX8	1427 aa		32.14	■■■□□ 2.74
MED17-216	ENST00000638790	EID1	Q9Y6B2	187 aa		32.14	■■■□□ 2.74
MED17-216	ENST00000638790	MET	P08581	1390 aa		32.11	■■■□□ 2.73
MED17-216	ENST00000638790	MED14	O60244	1454 aa		32.11	■■■□□ 2.73
MED17-216	ENST00000638790	QRICH2	Q9H0J4	1663 aa		32.11	■■■□□ 2.73
MED17-216	ENST00000638790	LRPPRC	P42704	1394 aa	Known RBP	32.11	■■■□□ 2.73
MED17-216	ENST00000638790	CDCA8	Q53HL2	280 aa		32.1	■■■□□ 2.73
MED17-216	ENST00000638790	ANP32C	O43423	234 aa		32.09	■■■□□ 2.73
MED17-216	ENST00000638790	STK26	Q9P289	416 aa		32.09	■■■□□ 2.73
MED17-216	ENST00000638790	ABCC11	Q96J66	1382 aa		32.09	■■■□□ 2.73
MED17-216	ENST00000638790	DLC1	Q96QB1	1528 aa		32.08	■■■□□ 2.73
MED17-216	ENST00000638790	TECPR2	O15040	1411 aa		32.02	■■■□□ 2.72
MED17-216	ENST00000638790	BCAN	Q96GW7	911 aa		32	■■■□□ 2.71
MED17-216	ENST00000638790	PRAM1	Q96QH2	718 aa		32	■■■□□ 2.71
MED17-216	ENST00000638790	TBX22	Q9Y458	520 aa		31.99	■■■□□ 2.71
MED17-216	ENST00000638790	SIRT1	Q96EB6	747 aa		31.98	■■■□□ 2.71
MED17-216	ENST00000638790	KNDC1	Q76NI1	1749 aa		31.98	■■■□□ 2.71
MED17-216	ENST00000638790	PUS7	Q96PZ0	661 aa	Known RBP	31.97	■■■□□ 2.71
MED17-216	ENST00000638790	TULP4	Q9NRJ4	1543 aa		31.97	■■■□□ 2.71
MED17-216	ENST00000638790	KDM4F	A0A1W2PPD8	638 aa		31.97	■■■□□ 2.71
MED17-216	ENST00000638790	PER1	O15534	1290 aa	Predicted RBP	31.97	■■■□□ 2.71
MED17-216	ENST00000638790	DIP2A	Q14689	1571 aa		31.97	■■■□□ 2.71
MED17-216	ENST00000638790	MYOM1	P52179	1685 aa		31.96	■■■□□ 2.71
MED17-216	ENST00000638790	ANKLE2	Q86XL3	938 aa		31.95	■■■□□ 2.7
MED17-216	ENST00000638790	SLC26A8	Q96RN1	970 aa		31.95	■■■□□ 2.7
MED17-216	ENST00000638790	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.95	■■■□□ 2.7
MED17-216	ENST00000638790	FAM135B	Q49AJ0	1406 aa		31.94	■■■□□ 2.7
MED17-216	ENST00000638790	CPS1	P31327	1500 aa		31.94	■■■□□ 2.7
MED17-216	ENST00000638790	POGK	Q9P215	609 aa		31.94	■■■□□ 2.7
MED17-216	ENST00000638790	CCER2	I3L3R5	266 aa		31.93	■■■□□ 2.7
MED17-216	ENST00000638790	PANK3	Q9H999	370 aa		31.93	■■■□□ 2.7
MED17-216	ENST00000638790	EVC2	Q86UK5	1308 aa		31.93	■■■□□ 2.7
MED17-216	ENST00000638790	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.92	■■■□□ 2.7
MED17-216	ENST00000638790	PLEKHH1	Q9ULM0	1364 aa		31.91	■■■□□ 2.7
MED17-216	ENST00000638790	PTPRU	Q92729	1446 aa		31.91	■■■□□ 2.7

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