RNA–Protein interactions for RNA: ENST00000638518.1

MED17-215, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-215	ENST00000638518	RPGRIP1L	Q68CZ1	1315 aa		33.41	■■■□□ 2.94
MED17-215	ENST00000638518	TONSL	Q96HA7	1378 aa		33.37	■■■□□ 2.93
MED17-215	ENST00000638518	IFT172	Q9UG01	1749 aa		33.36	■■■□□ 2.93
MED17-215	ENST00000638518	PPL	O60437	1756 aa		33.36	■■■□□ 2.93
MED17-215	ENST00000638518	L3MBTL2	Q969R5	705 aa		33.35	■■■□□ 2.93
MED17-215	ENST00000638518	LTK	P29376	864 aa		33.34	■■■□□ 2.93
MED17-215	ENST00000638518	SCAF11	Q99590	1463 aa	Known RBP	33.33	■■■□□ 2.93
MED17-215	ENST00000638518	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.33	■■■□□ 2.93
MED17-215	ENST00000638518	MYOM2	P54296	1465 aa		33.32	■■■□□ 2.92
MED17-215	ENST00000638518	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.32	■■■□□ 2.92
MED17-215	ENST00000638518	TXNDC2	Q86VQ3	553 aa		33.32	■■■□□ 2.92
MED17-215	ENST00000638518	HDGF	P51858	240 aa	Known RBP	33.3	■■■□□ 2.92
MED17-215	ENST00000638518	ANKLE2	Q86XL3	938 aa		33.3	■■■□□ 2.92
MED17-215	ENST00000638518	DCAF11	Q8TEB1	546 aa		33.3	■■■□□ 2.92
MED17-215	ENST00000638518	EID1	Q9Y6B2	187 aa		33.3	■■■□□ 2.92
MED17-215	ENST00000638518	TIMELESS	Q9UNS1	1208 aa		33.28	■■■□□ 2.92
MED17-215	ENST00000638518	VGF	O15240	615 aa	Predicted RBP	33.26	■■■□□ 2.91
MED17-215	ENST00000638518	PPP1R15A	O75807	674 aa	Predicted RBP	33.26	■■■□□ 2.91
MED17-215	ENST00000638518	ADGRF5	Q8IZF2	1346 aa		33.26	■■■□□ 2.91
MED17-215	ENST00000638518	NCKAP5L	Q9HCH0	1330 aa		33.26	■■■□□ 2.91
MED17-215	ENST00000638518	NRXN1	Q9ULB1	1477 aa		33.25	■■■□□ 2.91
MED17-215	ENST00000638518	POLR1A	O95602	1720 aa	Predicted RBP	33.25	■■■□□ 2.91
MED17-215	ENST00000638518	STAC3	Q96MF2	364 aa		33.25	■■■□□ 2.91
MED17-215	ENST00000638518	PLEKHG1	Q9ULL1	1385 aa		33.24	■■■□□ 2.91
MED17-215	ENST00000638518	KDM2A	Q9Y2K7	1162 aa		33.24	■■■□□ 2.91
MED17-215	ENST00000638518	MED14	O60244	1454 aa		33.23	■■■□□ 2.91
MED17-215	ENST00000638518	STRC	Q7RTU9	1775 aa		33.2	■■■□□ 2.91
MED17-215	ENST00000638518	NPHP4	O75161	1426 aa	Predicted RBP	33.19	■■■□□ 2.9
MED17-215	ENST00000638518	PIK3C2G	O75747	1445 aa		33.19	■■■□□ 2.9
MED17-215	ENST00000638518	PRAG1	Q86YV5	1406 aa		33.18	■■■□□ 2.9
MED17-215	ENST00000638518	SETBP1	Q9Y6X0	1596 aa		33.17	■■■□□ 2.9
MED17-215	ENST00000638518	NRXN3	Q9Y4C0	1643 aa		33.16	■■■□□ 2.9
MED17-215	ENST00000638518	SENP3	Q9H4L4	574 aa	Predicted RBP	33.14	■■■□□ 2.9
MED17-215	ENST00000638518	IQGAP1	P46940	1657 aa		33.13	■■■□□ 2.89
MED17-215	ENST00000638518	ADAMTS13	Q76LX8	1427 aa		33.13	■■■□□ 2.89
MED17-215	ENST00000638518	NBPF8	Q3BBV2	869 aa		33.09	■■■□□ 2.89
MED17-215	ENST00000638518	BCAN	Q96GW7	911 aa		33.08	■■■□□ 2.89
MED17-215	ENST00000638518	ALK	Q9UM73	1620 aa		33.07	■■■□□ 2.88
MED17-215	ENST00000638518	DIP2A	Q14689	1571 aa		33.06	■■■□□ 2.88
MED17-215	ENST00000638518	SLC26A8	Q96RN1	970 aa		33.05	■■■□□ 2.88
MED17-215	ENST00000638518	C14orf93	Q9H972	538 aa	Known RBP	33.05	■■■□□ 2.88
MED17-215	ENST00000638518	LAMC1	P11047	1609 aa		33.04	■■■□□ 2.88
MED17-215	ENST00000638518	CFAP70	Q5T0N1	1121 aa		33.04	■■■□□ 2.88
MED17-215	ENST00000638518	SETD1A	O15047	1707 aa	Known RBP	33.04	■■■□□ 2.88
MED17-215	ENST00000638518	TBX22	Q9Y458	520 aa		33.03	■■■□□ 2.88
MED17-215	ENST00000638518	KIAA1210	Q9ULL0	1709 aa		33.01	■■■□□ 2.87
MED17-215	ENST00000638518	ASXL1	Q8IXJ9	1541 aa		33.01	■■■□□ 2.87
MED17-215	ENST00000638518	TRPM1	Q7Z4N2	1603 aa		33	■■■□□ 2.87
MED17-215	ENST00000638518	DMRT2	Q9Y5R5	561 aa		33	■■■□□ 2.87
MED17-215	ENST00000638518	RALGAPB	Q86X10	1494 aa		32.98	■■■□□ 2.87
MED17-215	ENST00000638518	MET	P08581	1390 aa		32.97	■■■□□ 2.87
MED17-215	ENST00000638518	ADGRB1	O14514	1584 aa		32.96	■■■□□ 2.87
MED17-215	ENST00000638518	ZEB1	P37275	1124 aa	Predicted RBP	32.94	■■■□□ 2.86
MED17-215	ENST00000638518	PIK3R4	Q99570	1358 aa		32.94	■■■□□ 2.86
MED17-215	ENST00000638518	NBPF1	Q3BBV0	1214 aa		32.93	■■■□□ 2.86
MED17-215	ENST00000638518	TMEM132E	Q6IEE7	984 aa		32.91	■■■□□ 2.86
MED17-215	ENST00000638518	PTPRU	Q92729	1446 aa		32.91	■■■□□ 2.86
MED17-215	ENST00000638518	GPRASP1	Q5JY77	1395 aa		32.9	■■■□□ 2.86
MED17-215	ENST00000638518	ROCK2	O75116	1388 aa	Known RBP	32.89	■■■□□ 2.86
MED17-215	ENST00000638518	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.85	■■■□□ 2.85
MED17-215	ENST00000638518	LRPPRC	P42704	1394 aa	Known RBP	32.85	■■■□□ 2.85
MED17-215	ENST00000638518	NWD1	Q149M9	1564 aa		32.85	■■■□□ 2.85
MED17-215	ENST00000638518	XRN1	Q8IZH2	1706 aa	Known RBP	32.83	■■■□□ 2.85
MED17-215	ENST00000638518	CHD2	O14647	1828 aa	Known RBP	32.82	■■■□□ 2.84
MED17-215	ENST00000638518	KCNA6	P17658	529 aa		32.81	■■■□□ 2.84
MED17-215	ENST00000638518	TECPR2	O15040	1411 aa		32.8	■■■□□ 2.84
MED17-215	ENST00000638518	AMOTL2	Q9Y2J4	779 aa		32.8	■■■□□ 2.84
MED17-215	ENST00000638518	ABCC11	Q96J66	1382 aa		32.8	■■■□□ 2.84
MED17-215	ENST00000638518	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.79	■■■□□ 2.84
MED17-215	ENST00000638518	CARD11	Q9BXL7	1154 aa		32.79	■■■□□ 2.84
MED17-215	ENST00000638518	STK26	Q9P289	416 aa		32.78	■■■□□ 2.84
MED17-215	ENST00000638518	KNDC1	Q76NI1	1749 aa		32.77	■■■□□ 2.84
MED17-215	ENST00000638518	STRCP1	A6NGW2	1772 aa		32.76	■■■□□ 2.84
MED17-215	ENST00000638518	CPS1	P31327	1500 aa		32.76	■■■□□ 2.83
MED17-215	ENST00000638518	DLC1	Q96QB1	1528 aa		32.75	■■■□□ 2.83
MED17-215	ENST00000638518	PTCH1	Q13635	1447 aa		32.75	■■■□□ 2.83
MED17-215	ENST00000638518	NKTR	P30414	1462 aa	Known RBP	32.74	■■■□□ 2.83
MED17-215	ENST00000638518	TRAK1	Q9UPV9	953 aa		32.73	■■■□□ 2.83
MED17-215	ENST00000638518	ROBO2	Q9HCK4	1378 aa		32.72	■■■□□ 2.83
MED17-215	ENST00000638518	FAM135B	Q49AJ0	1406 aa		32.68	■■■□□ 2.82
MED17-215	ENST00000638518	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.68	■■■□□ 2.82
MED17-215	ENST00000638518	SIRT1	Q96EB6	747 aa		32.68	■■■□□ 2.82
MED17-215	ENST00000638518	LTBP4	Q8N2S1	1624 aa		32.68	■■■□□ 2.82
MED17-215	ENST00000638518	USP47	Q96K76	1375 aa		32.65	■■■□□ 2.82
MED17-215	ENST00000638518	PLEKHH1	Q9ULM0	1364 aa		32.65	■■■□□ 2.82
MED17-215	ENST00000638518	EIF3A	Q14152	1382 aa	Known RBP	32.63	■■■□□ 2.81
MED17-215	ENST00000638518	PRAM1	Q96QH2	718 aa		32.63	■■■□□ 2.81
MED17-215	ENST00000638518	WAPL	Q7Z5K2	1190 aa		32.62	■■■□□ 2.81
MED17-215	ENST00000638518	LRRC7	Q96NW7	1537 aa		32.61	■■■□□ 2.81
MED17-215	ENST00000638518	PROSER2	Q86WR7	435 aa	Predicted RBP	32.6	■■■□□ 2.81
MED17-215	ENST00000638518	TMEM94	Q12767	1356 aa		32.58	■■■□□ 2.81
MED17-215	ENST00000638518	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.58	■■■□□ 2.81
MED17-215	ENST00000638518	POGK	Q9P215	609 aa		32.58	■■■□□ 2.81
MED17-215	ENST00000638518	RBM33	Q96EV2	1170 aa	Known RBP	32.56	■■■□□ 2.8
MED17-215	ENST00000638518	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
MED17-215	ENST00000638518	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
MED17-215	ENST00000638518	NCOA3	Q9Y6Q9	1424 aa		32.53	■■■□□ 2.8
MED17-215	ENST00000638518	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.52	■■■□□ 2.8
MED17-215	ENST00000638518	ST20-MTHFS	A0A0A6YYL1	179 aa		32.52	■■■□□ 2.8
MED17-215	ENST00000638518	HSPA5	P11021	654 aa	Known RBP	32.52	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms