RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
PPFIA1-225ENST00000638133 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
PPFIA1-225ENST00000638133 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
PPFIA1-225ENST00000638133 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
PPFIA1-225ENST00000638133 ZFYVE9O95405 1425 aa22.25■■□□□ 1.15
PPFIA1-225ENST00000638133 TOM1O60784 492 aa22.25■■□□□ 1.15
PPFIA1-225ENST00000638133 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
PPFIA1-225ENST00000638133 ZNF326Q5BKZ1 582 aaKnown RBP22.24■■□□□ 1.15
PPFIA1-225ENST00000638133 NUTM2DQ5VT03 806 aaPredicted RBP22.23■■□□□ 1.15
PPFIA1-225ENST00000638133 PLEKHG1Q9ULL1 1385 aa22.23■■□□□ 1.15
PPFIA1-225ENST00000638133 TRPM2O94759 1503 aa22.21■■□□□ 1.15
PPFIA1-225ENST00000638133 LRRC7Q96NW7 1537 aa22.21■■□□□ 1.15
PPFIA1-225ENST00000638133 PIP4K2BP78356 416 aa22.2■■□□□ 1.14
PPFIA1-225ENST00000638133 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
PPFIA1-225ENST00000638133 KCNA6P17658 529 aa22.19■■□□□ 1.14
PPFIA1-225ENST00000638133 KIF1BO60333 1816 aa22.19■■□□□ 1.14
PPFIA1-225ENST00000638133 CLTCL1P53675 1640 aa22.18■■□□□ 1.14
PPFIA1-225ENST00000638133 SETD5Q9C0A6 1442 aa22.16■■□□□ 1.14
PPFIA1-225ENST00000638133 PROSER2Q86WR7 435 aaPredicted RBP22.15■■□□□ 1.14
PPFIA1-225ENST00000638133 TBX22Q9Y458 520 aa22.14■■□□□ 1.13
PPFIA1-225ENST00000638133 MPHOSPH9Q99550 1183 aa22.13■■□□□ 1.13
PPFIA1-225ENST00000638133 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
PPFIA1-225ENST00000638133 NKTRP30414 1462 aaKnown RBP22.12■■□□□ 1.13
PPFIA1-225ENST00000638133 FOXD1Q16676 465 aa22.11■■□□□ 1.13
PPFIA1-225ENST00000638133 NWD1Q149M9 1564 aa22.11■■□□□ 1.13
PPFIA1-225ENST00000638133 TMEM94Q12767 1356 aa22.11■■□□□ 1.13
PPFIA1-225ENST00000638133 CHD2O14647 1828 aaKnown RBP22.1■■□□□ 1.13
PPFIA1-225ENST00000638133 XIRP1Q702N8 1843 aaKnown RBP22.08■■□□□ 1.13
PPFIA1-225ENST00000638133 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
PPFIA1-225ENST00000638133 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
PPFIA1-225ENST00000638133 RAB3GAP2Q9H2M9 1393 aa22.07■■□□□ 1.12
PPFIA1-225ENST00000638133 RBM33Q96EV2 1170 aaKnown RBP22.06■■□□□ 1.12
PPFIA1-225ENST00000638133 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
PPFIA1-225ENST00000638133 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
PPFIA1-225ENST00000638133 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
PPFIA1-225ENST00000638133 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
PPFIA1-225ENST00000638133 RPGRIP1LQ68CZ1 1315 aa22.04■■□□□ 1.12
PPFIA1-225ENST00000638133 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
PPFIA1-225ENST00000638133 MSH6P52701 1360 aa22.03■■□□□ 1.12
PPFIA1-225ENST00000638133 HSPA1LP34931 641 aa22.03■■□□□ 1.12
PPFIA1-225ENST00000638133 ALKQ9UM73 1620 aa22.02■■□□□ 1.11
PPFIA1-225ENST00000638133 AMOTL2Q9Y2J4 779 aa22.01■■□□□ 1.11
PPFIA1-225ENST00000638133 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
PPFIA1-225ENST00000638133 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
PPFIA1-225ENST00000638133 PPLO60437 1756 aa21.97■■□□□ 1.11
PPFIA1-225ENST00000638133 DISP3Q9P2K9 1392 aa21.96■■□□□ 1.11
PPFIA1-225ENST00000638133 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
PPFIA1-225ENST00000638133 METP08581 1390 aa21.94■■□□□ 1.1
PPFIA1-225ENST00000638133 PTPRUQ92729 1446 aa21.94■■□□□ 1.1
PPFIA1-225ENST00000638133 ATF3P18847 181 aa21.92■■□□□ 1.1
PPFIA1-225ENST00000638133 HRCP23327 699 aa21.92■■□□□ 1.1
PPFIA1-225ENST00000638133 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
PPFIA1-225ENST00000638133 XRN1Q8IZH2 1706 aaKnown RBP21.92■■□□□ 1.1
PPFIA1-225ENST00000638133 FAM135BQ49AJ0 1406 aa21.91■■□□□ 1.1
PPFIA1-225ENST00000638133 SLAIN2Q9P270 581 aa21.91■■□□□ 1.1
PPFIA1-225ENST00000638133 SPATA31E1Q6ZUB1 1445 aa21.9■■□□□ 1.1
PPFIA1-225ENST00000638133 ANKRD30BQ9BXX2 1392 aa21.9■■□□□ 1.1
PPFIA1-225ENST00000638133 CADPS2Q86UW7 1296 aa21.9■■□□□ 1.1
PPFIA1-225ENST00000638133 ROBO1Q9Y6N7 1651 aa21.89■■□□□ 1.1
PPFIA1-225ENST00000638133 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.87■■□□□ 1.09
PPFIA1-225ENST00000638133 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
PPFIA1-225ENST00000638133 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
PPFIA1-225ENST00000638133 SETD1AO15047 1707 aaKnown RBP21.84■■□□□ 1.09
PPFIA1-225ENST00000638133 DCCP43146 1447 aa21.8■■□□□ 1.08
PPFIA1-225ENST00000638133 PTCH1Q13635 1447 aa21.8■■□□□ 1.08
PPFIA1-225ENST00000638133 ADGRL3Q9HAR2 1447 aa21.79■■□□□ 1.08
PPFIA1-225ENST00000638133 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
PPFIA1-225ENST00000638133 PHLPP1O60346 1717 aa21.78■■□□□ 1.08
PPFIA1-225ENST00000638133 PIK3C2GO75747 1445 aa21.78■■□□□ 1.08
PPFIA1-225ENST00000638133 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
PPFIA1-225ENST00000638133 STK26Q9P289 416 aa21.77■■□□□ 1.08
PPFIA1-225ENST00000638133 ROBO2Q9HCK4 1378 aa21.76■■□□□ 1.07
PPFIA1-225ENST00000638133 NALCNQ8IZF0 1738 aa21.76■■□□□ 1.07
PPFIA1-225ENST00000638133 MYOM2P54296 1465 aa21.75■■□□□ 1.07
PPFIA1-225ENST00000638133 TMEM132EQ6IEE7 984 aa21.74■■□□□ 1.07
PPFIA1-225ENST00000638133 LAMC1P11047 1609 aa21.73■■□□□ 1.07
PPFIA1-225ENST00000638133 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
PPFIA1-225ENST00000638133 KDM2AQ9Y2K7 1162 aa21.72■■□□□ 1.07
PPFIA1-225ENST00000638133 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
PPFIA1-225ENST00000638133 C14orf93Q9H972 538 aaKnown RBP21.71■■□□□ 1.07
PPFIA1-225ENST00000638133 LRPPRCP42704 1394 aaKnown RBP21.71■■□□□ 1.07
PPFIA1-225ENST00000638133 MST1RQ04912 1400 aa21.71■■□□□ 1.07
PPFIA1-225ENST00000638133 BRINP3Q76B58 766 aa21.7■■□□□ 1.06
PPFIA1-225ENST00000638133 NRXN1Q9ULB1 1477 aa21.7■■□□□ 1.06
PPFIA1-225ENST00000638133 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
PPFIA1-225ENST00000638133 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
PPFIA1-225ENST00000638133 STAC3Q96MF2 364 aa21.68■■□□□ 1.06
PPFIA1-225ENST00000638133 ABCC11Q96J66 1382 aa21.68■■□□□ 1.06
PPFIA1-225ENST00000638133 JCADQ9P266 1359 aa21.68■■□□□ 1.06
PPFIA1-225ENST00000638133 YTHDC2Q9H6S0 1430 aaKnown RBP21.68■■□□□ 1.06
PPFIA1-225ENST00000638133 KNDC1Q76NI1 1749 aa21.67■■□□□ 1.06
PPFIA1-225ENST00000638133 AHDC1Q5TGY3 1603 aaPredicted RBP21.67■■□□□ 1.06
PPFIA1-225ENST00000638133 ASXL1Q8IXJ9 1541 aa21.67■■□□□ 1.06
PPFIA1-225ENST00000638133 TECPR2O15040 1411 aa21.67■■□□□ 1.06
PPFIA1-225ENST00000638133 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
PPFIA1-225ENST00000638133 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
PPFIA1-225ENST00000638133 WAPLQ7Z5K2 1190 aa21.66■■□□□ 1.06
PPFIA1-225ENST00000638133 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.05
PPFIA1-225ENST00000638133 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
PPFIA1-225ENST00000638133 NHSL1Q5SYE7 1610 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms