RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 APBB1O00213 710 aa18.21■□□□□ 0.51
UBE3A-227ENST00000638011 MCM2P49736 904 aa18.21■□□□□ 0.51
UBE3A-227ENST00000638011 KIF2AO00139 706 aaPredicted RBP18.21■□□□□ 0.51
UBE3A-227ENST00000638011 EPS15P42566 896 aa18.21■□□□□ 0.51
UBE3A-227ENST00000638011 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
UBE3A-227ENST00000638011 GOLGA6L10A0A0M3HER8 536 aa18.19■□□□□ 0.5
UBE3A-227ENST00000638011 NAP1L1P55209 391 aaKnown RBP18.19■□□□□ 0.5
UBE3A-227ENST00000638011 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.19■□□□□ 0.5
UBE3A-227ENST00000638011 MCM3P25205 808 aa18.19■□□□□ 0.5
UBE3A-227ENST00000638011 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
UBE3A-227ENST00000638011 SPATA24Q86W54 205 aa18.18■□□□□ 0.5
UBE3A-227ENST00000638011 AMOTL1Q8IY63 956 aa18.17■□□□□ 0.5
UBE3A-227ENST00000638011 SAFBQ15424 915 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBE3A-227ENST00000638011 U2AF1L5P0DN76 240 aaPredicted RBP18.17■□□□□ 0.5
UBE3A-227ENST00000638011 U2AF1Q01081 240 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■■■□ 25
UBE3A-227ENST00000638011 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
UBE3A-227ENST00000638011 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
UBE3A-227ENST00000638011 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
UBE3A-227ENST00000638011 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
UBE3A-227ENST00000638011 SLC26A8Q96RN1 970 aa18.16■□□□□ 0.5
UBE3A-227ENST00000638011 SEPT7Q16181 437 aaKnown RBP18.16■□□□□ 0.5
UBE3A-227ENST00000638011 CPLX1O14810 134 aa18.16■□□□□ 0.5
UBE3A-227ENST00000638011 SRPK2P78362 688 aaKnown RBP18.16■□□□□ 0.5
UBE3A-227ENST00000638011 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
UBE3A-227ENST00000638011 MEX3CQ5U5Q3 659 aaKnown RBP18.15■□□□□ 0.5
UBE3A-227ENST00000638011 E9PSI1 815 aa18.15■□□□□ 0.5
UBE3A-227ENST00000638011 OFD1O75665 1012 aa18.15■□□□□ 0.5
UBE3A-227ENST00000638011 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
UBE3A-227ENST00000638011 PLCD4Q9BRC7 762 aa18.15■□□□□ 0.5
UBE3A-227ENST00000638011 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
UBE3A-227ENST00000638011 FEZ1Q99689 392 aa18.14■□□□□ 0.5
UBE3A-227ENST00000638011 LUZP1Q86V48 1076 aa18.14■□□□□ 0.49
UBE3A-227ENST00000638011 VPS53Q5VIR6 699 aa18.13■□□□□ 0.49
UBE3A-227ENST00000638011 GBP3Q9H0R5 595 aa18.13■□□□□ 0.49
UBE3A-227ENST00000638011 PRKCSHP14314 528 aaPredicted RBP18.13■□□□□ 0.49
UBE3A-227ENST00000638011 CCDC112Q8NEF3 446 aa18.13■□□□□ 0.49
UBE3A-227ENST00000638011 KINO60870 393 aaKnown RBP18.13■□□□□ 0.49
UBE3A-227ENST00000638011 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
UBE3A-227ENST00000638011 FILIP1LQ4L180 1135 aa18.13■□□□□ 0.49
UBE3A-227ENST00000638011 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
UBE3A-227ENST00000638011 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
UBE3A-227ENST00000638011 TRDNQ13061 729 aa18.12■□□□□ 0.49
UBE3A-227ENST00000638011 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
UBE3A-227ENST00000638011 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
UBE3A-227ENST00000638011 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
UBE3A-227ENST00000638011 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
UBE3A-227ENST00000638011 SMC3Q9UQE7 1217 aa18.11■□□□□ 0.49
UBE3A-227ENST00000638011 ANKRD30AQ9BXX3 1397 aa18.11■□□□□ 0.49
UBE3A-227ENST00000638011 RRP1P56182 461 aaKnown RBP18.11■□□□□ 0.49
UBE3A-227ENST00000638011 ZNHIT6Q9NWK9 470 aaKnown RBP18.11■□□□□ 0.49
UBE3A-227ENST00000638011 TRIM5Q9C035 493 aa18.11■□□□□ 0.49
UBE3A-227ENST00000638011 GBP2P32456 591 aaPredicted RBP18.11■□□□□ 0.49
UBE3A-227ENST00000638011 LRRCC1Q9C099 1032 aa18.11■□□□□ 0.49
UBE3A-227ENST00000638011 MICALCLQ6ZW33 695 aa18.1■□□□□ 0.49
UBE3A-227ENST00000638011 XBP1P17861 261 aa18.1■□□□□ 0.49
UBE3A-227ENST00000638011 NF2P35240 595 aa18.1■□□□□ 0.49
UBE3A-227ENST00000638011 TSPY26PQ9H489 355 aa18.09■□□□□ 0.49
UBE3A-227ENST00000638011 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
UBE3A-227ENST00000638011 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
UBE3A-227ENST00000638011 WRNQ14191 1432 aaPredicted RBP eCLIP18.09■□□□□ 0.495e-6■■■■■ 29.2
UBE3A-227ENST00000638011 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
UBE3A-227ENST00000638011 NINLQ9Y2I6 1382 aa18.09■□□□□ 0.49
UBE3A-227ENST00000638011 ENOX2Q16206 610 aaKnown RBP18.09■□□□□ 0.49
UBE3A-227ENST00000638011 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.09■□□□□ 0.498e-7■■■■■ 62.4
UBE3A-227ENST00000638011 PDCL3Q9H2J4 239 aa18.08■□□□□ 0.49
UBE3A-227ENST00000638011 SHTN1A0MZ66 631 aa18.08■□□□□ 0.49
UBE3A-227ENST00000638011 NOL8Q76FK4 1167 aaKnown RBP18.08■□□□□ 0.48
UBE3A-227ENST00000638011 CHMP3Q9Y3E7 222 aa18.08■□□□□ 0.48
UBE3A-227ENST00000638011 FMN1Q68DA7 1419 aa18.07■□□□□ 0.48
UBE3A-227ENST00000638011 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
UBE3A-227ENST00000638011 ANKRD45Q5TZF3 282 aa18.06■□□□□ 0.48
UBE3A-227ENST00000638011 PSMA5P28066 241 aa18.06■□□□□ 0.48
UBE3A-227ENST00000638011 PPM1EQ8WY54 764 aa18.06■□□□□ 0.48
UBE3A-227ENST00000638011 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
UBE3A-227ENST00000638011 KIF3BO15066 747 aa18.06■□□□□ 0.48
UBE3A-227ENST00000638011 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
UBE3A-227ENST00000638011 CCDC43Q96MW1 224 aaKnown RBP18.06■□□□□ 0.48
UBE3A-227ENST00000638011 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
UBE3A-227ENST00000638011 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 TRAK2O60296 914 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.05■□□□□ 0.48
UBE3A-227ENST00000638011 SDF4Q9BRK5 362 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 DACH1Q9UI36 760 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 CCDC91Q7Z6B0 441 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 UACAQ9BZF9 1416 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 ERICH2A1L162 156 aa18.05■□□□□ 0.48
UBE3A-227ENST00000638011 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
UBE3A-227ENST00000638011 FOXD4L4Q8WXT5 416 aaPredicted RBP18.05■□□□□ 0.48
UBE3A-227ENST00000638011 TTLL5Q6EMB2 1281 aa18.04■□□□□ 0.48
UBE3A-227ENST00000638011 UQCRHLA0A096LP55 91 aa18.04■□□□□ 0.48
UBE3A-227ENST00000638011 UQCRHP07919 91 aa18.04■□□□□ 0.48
UBE3A-227ENST00000638011 TXLNAP40222 546 aa18.04■□□□□ 0.48
UBE3A-227ENST00000638011 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
UBE3A-227ENST00000638011 SENP3-EIF4A1A0A087X0R7 540 aa18.04■□□□□ 0.48
UBE3A-227ENST00000638011 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
UBE3A-227ENST00000638011 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
UBE3A-227ENST00000638011 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
UBE3A-227ENST00000638011 CBFA2T2O43439 604 aa18.03■□□□□ 0.48
UBE3A-227ENST00000638011 CTR9Q6PD62 1173 aa18.03■□□□□ 0.48
UBE3A-227ENST00000638011 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms