RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 FSD2A1L4K1 749 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 STAC3Q96MF2 364 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 SIN3AQ96ST3 1273 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 PTPRKQ15262 1439 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 POGZQ7Z3K3 1410 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 KDM4FA0A1W2PPD8 638 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 CCDC141Q6ZP82 1450 aa10.18□□□□□ -0.78
CDKL5-211ENST00000637881 ARID4BQ4LE39 1312 aaPredicted RBP10.18□□□□□ -0.78
CDKL5-211ENST00000637881 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
CDKL5-211ENST00000637881 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
CDKL5-211ENST00000637881 C9orf84Q5VXU9 1444 aa10.17□□□□□ -0.78
CDKL5-211ENST00000637881 VGFO15240 615 aaPredicted RBP10.17□□□□□ -0.78
CDKL5-211ENST00000637881 MLECQ14165 292 aa10.17□□□□□ -0.78
CDKL5-211ENST00000637881 GOLGA6L3A6NEY3 463 aa10.16□□□□□ -0.78
CDKL5-211ENST00000637881 DCAF8L1A6NGE4 600 aa10.16□□□□□ -0.78
CDKL5-211ENST00000637881 ESPNB1AK53 854 aa10.16□□□□□ -0.78
CDKL5-211ENST00000637881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDKL5-211ENST00000637881 YEATS2Q9ULM3 1422 aa10.15□□□□□ -0.78
CDKL5-211ENST00000637881 TONSLQ96HA7 1378 aa10.15□□□□□ -0.78
CDKL5-211ENST00000637881 DMTNQ08495 405 aa10.15□□□□□ -0.78
CDKL5-211ENST00000637881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDKL5-211ENST00000637881 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 TAF3Q5VWG9 929 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 PRKRIP1Q9H875 184 aaPredicted RBP10.14□□□□□ -0.79
CDKL5-211ENST00000637881 KIF3BO15066 747 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 XRCC6P12956 609 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDKL5-211ENST00000637881 MRE11P49959 708 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 GGT6Q6P531 493 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 POGKQ9P215 609 aa10.14□□□□□ -0.79
CDKL5-211ENST00000637881 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
CDKL5-211ENST00000637881 KIF15Q9NS87 1388 aa10.13□□□□□ -0.79
CDKL5-211ENST00000637881 ARHGEF5Q12774 1597 aa10.13□□□□□ -0.79
CDKL5-211ENST00000637881 KIF20AO95235 890 aa10.13□□□□□ -0.79
CDKL5-211ENST00000637881 TNNT2P45379 298 aaPredicted RBP10.13□□□□□ -0.79
CDKL5-211ENST00000637881 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
CDKL5-211ENST00000637881 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
CDKL5-211ENST00000637881 RICTORQ6R327 1708 aa10.12□□□□□ -0.79
CDKL5-211ENST00000637881 FRMPD1Q5SYB0 1578 aa10.12□□□□□ -0.79
CDKL5-211ENST00000637881 RRP1P56182 461 aaKnown RBP10.11□□□□□ -0.79
CDKL5-211ENST00000637881 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.11□□□□□ -0.79
CDKL5-211ENST00000637881 ATP7AQ04656 1500 aa10.11□□□□□ -0.79
CDKL5-211ENST00000637881 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
CDKL5-211ENST00000637881 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
CDKL5-211ENST00000637881 CHMP4BQ9H444 224 aaKnown RBP10.11□□□□□ -0.79
CDKL5-211ENST00000637881 RTEL1-TNFRSF6BF6WH68 1400 aa10.1□□□□□ -0.79
CDKL5-211ENST00000637881 FTSJ3Q8IY81 847 aaKnown RBP10.1□□□□□ -0.79
CDKL5-211ENST00000637881 FAM9BQ8IZU0 186 aa10.1□□□□□ -0.79
CDKL5-211ENST00000637881 ZFYVE16Q7Z3T8 1539 aa10.1□□□□□ -0.79
CDKL5-211ENST00000637881 HECW2Q9P2P5 1572 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 OFD1O75665 1012 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 FAM161AQ3B820 660 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 KIAA1211Q6ZU35 1233 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 DHX29Q7Z478 1369 aaKnown RBP10.09□□□□□ -0.79
CDKL5-211ENST00000637881 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
CDKL5-211ENST00000637881 CCDC144AA2RUR9 1427 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 ATP10AO60312 1499 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 KDM5CP41229 1560 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 KIDINS220Q9ULH0 1771 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 LETM1O95202 739 aaPredicted RBP10.09□□□□□ -0.79
CDKL5-211ENST00000637881 TEX2Q8IWB9 1127 aa10.09□□□□□ -0.79
CDKL5-211ENST00000637881 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
CDKL5-211ENST00000637881 ROCK1Q13464 1354 aa10.08□□□□□ -0.8
CDKL5-211ENST00000637881 ANKRD50Q9ULJ7 1429 aa10.08□□□□□ -0.8
CDKL5-211ENST00000637881 A2MP01023 1474 aa10.08□□□□□ -0.8
CDKL5-211ENST00000637881 MAGI2Q86UL8 1455 aa10.08□□□□□ -0.8
CDKL5-211ENST00000637881 SHANK2Q9UPX8 1470 aa10.08□□□□□ -0.8
CDKL5-211ENST00000637881 NAIPQ13075 1403 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 CCDC7Q96M83 1385 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 CHRM1P11229 460 aaPredicted RBP10.07□□□□□ -0.8
CDKL5-211ENST00000637881 BECN1Q14457 450 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 PAXIP1Q6ZW49 1069 aaPredicted RBP10.07□□□□□ -0.8
CDKL5-211ENST00000637881 HIRIP3Q9BW71 556 aaPredicted RBP10.07□□□□□ -0.8
CDKL5-211ENST00000637881 MYH16Q9H6N6 1097 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 CROCC2H7BZ55 1655 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 ABCA6Q8N139 1617 aa10.07□□□□□ -0.8
CDKL5-211ENST00000637881 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
CDKL5-211ENST00000637881 TMEM51Q9NW97 253 aa10.06□□□□□ -0.8
CDKL5-211ENST00000637881 INO80Q9ULG1 1556 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-211ENST00000637881 ZMYM4Q5VZL5 1548 aa10.06□□□□□ -0.8
CDKL5-211ENST00000637881 RIPK4P57078 832 aa10.06□□□□□ -0.8
CDKL5-211ENST00000637881 TRIM44Q96DX7 344 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-211ENST00000637881 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
CDKL5-211ENST00000637881 ADGRL2O95490 1459 aa10.05□□□□□ -0.8
CDKL5-211ENST00000637881 DYNC1I1O14576 645 aa10.05□□□□□ -0.8
CDKL5-211ENST00000637881 EXOC6Q8TAG9 804 aa10.05□□□□□ -0.8
CDKL5-211ENST00000637881 ANP32BQ92688 251 aaKnown RBP10.05□□□□□ -0.8
CDKL5-211ENST00000637881 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
CDKL5-211ENST00000637881 HFM1A2PYH4 1435 aa10.05□□□□□ -0.8
CDKL5-211ENST00000637881 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
CDKL5-211ENST00000637881 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
CDKL5-211ENST00000637881 DUOX2Q9NRD8 1548 aa10.04□□□□□ -0.8
CDKL5-211ENST00000637881 NUP155O75694 1391 aa10.04□□□□□ -0.8
CDKL5-211ENST00000637881 CCDC94Q9BW85 323 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-211ENST00000637881 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
CDKL5-211ENST00000637881 ARHGEF40Q8TER5 1519 aa10.03□□□□□ -0.8
CDKL5-211ENST00000637881 GRPEL1Q9HAV7 217 aa10.03□□□□□ -0.8
CDKL5-211ENST00000637881 ZHX1Q9UKY1 873 aaPredicted RBP10.03□□□□□ -0.8
CDKL5-211ENST00000637881 PDE3BQ13370 1112 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms