RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 DEFB132Q7Z7B7 95 aa16.3■□□□□ 0.2
CHD2-229ENST00000637789 EEA1Q15075 1411 aa16.29■□□□□ 0.2
CHD2-229ENST00000637789 HRCP23327 699 aa16.29■□□□□ 0.2
CHD2-229ENST00000637789 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
CHD2-229ENST00000637789 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
CHD2-229ENST00000637789 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
CHD2-229ENST00000637789 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
CHD2-229ENST00000637789 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
CHD2-229ENST00000637789 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
CHD2-229ENST00000637789 ADAMTS2O95450 1211 aa16.27■□□□□ 0.2
CHD2-229ENST00000637789 USP21Q9UK80 565 aa16.27■□□□□ 0.2
CHD2-229ENST00000637789 CEP152O94986 1710 aa16.27■□□□□ 0.19
CHD2-229ENST00000637789 NCOA3Q9Y6Q9 1424 aa16.27■□□□□ 0.19
CHD2-229ENST00000637789 ATF3P18847 181 aa16.26■□□□□ 0.19
CHD2-229ENST00000637789 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
CHD2-229ENST00000637789 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
CHD2-229ENST00000637789 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
CHD2-229ENST00000637789 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
CHD2-229ENST00000637789 LRRC59Q96AG4 307 aaKnown RBP16.25■□□□□ 0.19
CHD2-229ENST00000637789 EFCAB6Q5THR3 1501 aa16.24■□□□□ 0.19
CHD2-229ENST00000637789 ATRNO75882 1429 aa16.24■□□□□ 0.19
CHD2-229ENST00000637789 MROH1Q8NDA8 1641 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 BCANQ96GW7 911 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 ASXL1Q8IXJ9 1541 aa16.23■□□□□ 0.19
CHD2-229ENST00000637789 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
CHD2-229ENST00000637789 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
CHD2-229ENST00000637789 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
CHD2-229ENST00000637789 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
CHD2-229ENST00000637789 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
CHD2-229ENST00000637789 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
CHD2-229ENST00000637789 EIF2AK4Q9P2K8 1649 aaKnown RBP16.16■□□□□ 0.18
CHD2-229ENST00000637789 IDI1Q13907 227 aa16.15■□□□□ 0.18
CHD2-229ENST00000637789 UNC13BO14795 1591 aa16.13■□□□□ 0.17
CHD2-229ENST00000637789 RSPH4AQ5TD94 716 aa16.12■□□□□ 0.17
CHD2-229ENST00000637789 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
CHD2-229ENST00000637789 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
CHD2-229ENST00000637789 PLEKHG1Q9ULL1 1385 aa16.11■□□□□ 0.17
CHD2-229ENST00000637789 MST1RQ04912 1400 aa16.11■□□□□ 0.17
CHD2-229ENST00000637789 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
CHD2-229ENST00000637789 ADGRB3O60242 1522 aa16.1■□□□□ 0.17
CHD2-229ENST00000637789 R3HDM1Q15032 1099 aaKnown RBP16.09■□□□□ 0.17
CHD2-229ENST00000637789 TBX22Q9Y458 520 aa16.09■□□□□ 0.17
CHD2-229ENST00000637789 DCCP43146 1447 aa16.09■□□□□ 0.17
CHD2-229ENST00000637789 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
CHD2-229ENST00000637789 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
CHD2-229ENST00000637789 BRWD3Q6RI45 1802 aa16.07■□□□□ 0.16
CHD2-229ENST00000637789 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
CHD2-229ENST00000637789 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
CHD2-229ENST00000637789 ZFYVE9O95405 1425 aa16.06■□□□□ 0.16
CHD2-229ENST00000637789 C1QTNF8P60827 252 aa16.05■□□□□ 0.16
CHD2-229ENST00000637789 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
CHD2-229ENST00000637789 GLI3P10071 1580 aa16.04■□□□□ 0.16
CHD2-229ENST00000637789 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
CHD2-229ENST00000637789 BAG6P46379 1132 aa16.04■□□□□ 0.16
CHD2-229ENST00000637789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.163e-8■■■□□ 16.9
CHD2-229ENST00000637789 RALGAPBQ86X10 1494 aa16.02■□□□□ 0.15
CHD2-229ENST00000637789 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.15
CHD2-229ENST00000637789 PIK3R4Q99570 1358 aa16■□□□□ 0.15
CHD2-229ENST00000637789 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
CHD2-229ENST00000637789 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
CHD2-229ENST00000637789 COL22A1Q8NFW1 1626 aaPredicted RBP15.99■□□□□ 0.15
CHD2-229ENST00000637789 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
CHD2-229ENST00000637789 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
CHD2-229ENST00000637789 TRPM2O94759 1503 aa15.99■□□□□ 0.15
CHD2-229ENST00000637789 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
CHD2-229ENST00000637789 EN1Q05925 392 aaPredicted RBP15.98■□□□□ 0.15
CHD2-229ENST00000637789 SEPT12Q8IYM1 358 aa15.98■□□□□ 0.15
CHD2-229ENST00000637789 PTPRUQ92729 1446 aa15.98■□□□□ 0.15
CHD2-229ENST00000637789 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
CHD2-229ENST00000637789 LAMC1P11047 1609 aa15.97■□□□□ 0.15
CHD2-229ENST00000637789 SOS2Q07890 1332 aaPredicted RBP15.97■□□□□ 0.15
CHD2-229ENST00000637789 MARF1Q9Y4F3 1742 aaKnown RBP15.97■□□□□ 0.15
CHD2-229ENST00000637789 NOS1P29475 1434 aa15.97■□□□□ 0.15
CHD2-229ENST00000637789 MYOM2P54296 1465 aa15.97■□□□□ 0.15
CHD2-229ENST00000637789 MYO5BQ9ULV0 1848 aa15.96■□□□□ 0.15
CHD2-229ENST00000637789 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
CHD2-229ENST00000637789 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
CHD2-229ENST00000637789 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
CHD2-229ENST00000637789 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
CHD2-229ENST00000637789 CAMTA1Q9Y6Y1 1673 aa15.94■□□□□ 0.14
CHD2-229ENST00000637789 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
CHD2-229ENST00000637789 CEP350Q5VT06 3117 aa15.92■□□□□ 0.14
CHD2-229ENST00000637789 LMTK2Q8IWU2 1503 aa15.91■□□□□ 0.14
CHD2-229ENST00000637789 GCC2Q8IWJ2 1684 aa15.91■□□□□ 0.14
CHD2-229ENST00000637789 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
CHD2-229ENST00000637789 KANK1Q14678 1352 aa15.9■□□□□ 0.14
CHD2-229ENST00000637789 SLIT2O94813 1529 aa15.9■□□□□ 0.14
CHD2-229ENST00000637789 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
CHD2-229ENST00000637789 NINLQ9Y2I6 1382 aa15.89■□□□□ 0.13
CHD2-229ENST00000637789 ADGRL3Q9HAR2 1447 aa15.89■□□□□ 0.13
CHD2-229ENST00000637789 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHD2-229ENST00000637789 PPP1R1BQ9UD71 204 aaPredicted RBP15.89■□□□□ 0.13
CHD2-229ENST00000637789 TMEM131LA2VDJ0 1609 aa15.89■□□□□ 0.13
CHD2-229ENST00000637789 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
CHD2-229ENST00000637789 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
CHD2-229ENST00000637789 ERBINQ96RT1 1412 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms