RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
CLN6-216ENST00000636876 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
CLN6-216ENST00000636876 ANKLE2Q86XL3 938 aa23.26■■□□□ 1.31
CLN6-216ENST00000636876 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
CLN6-216ENST00000636876 EID1Q9Y6B2 187 aa23.25■■□□□ 1.31
CLN6-216ENST00000636876 RPGRIP1LQ68CZ1 1315 aa23.25■■□□□ 1.31
CLN6-216ENST00000636876 NEXMIFQ5QGS0 1516 aa23.24■■□□□ 1.31
CLN6-216ENST00000636876 LTKP29376 864 aa23.24■■□□□ 1.31
CLN6-216ENST00000636876 TXNDC2Q86VQ3 553 aa23.24■■□□□ 1.31
CLN6-216ENST00000636876 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.24■■□□□ 1.31
CLN6-216ENST00000636876 NCKAP5LQ9HCH0 1330 aa23.24■■□□□ 1.31
CLN6-216ENST00000636876 POLR1AO95602 1720 aaPredicted RBP23.23■■□□□ 1.31
CLN6-216ENST00000636876 HDGFP51858 240 aaKnown RBP23.23■■□□□ 1.31
CLN6-216ENST00000636876 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
CLN6-216ENST00000636876 PPLO60437 1756 aa23.2■■□□□ 1.3
CLN6-216ENST00000636876 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
CLN6-216ENST00000636876 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
CLN6-216ENST00000636876 DMRT2Q9Y5R5 561 aa23.19■■□□□ 1.3
CLN6-216ENST00000636876 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
CLN6-216ENST00000636876 LTBP4Q8N2S1 1624 aa23.19■■□□□ 1.3
CLN6-216ENST00000636876 MED14O60244 1454 aa23.18■■□□□ 1.3
CLN6-216ENST00000636876 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
CLN6-216ENST00000636876 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
CLN6-216ENST00000636876 VGFO15240 615 aaPredicted RBP23.16■■□□□ 1.3
CLN6-216ENST00000636876 MYOM2P54296 1465 aa23.13■■□□□ 1.29
CLN6-216ENST00000636876 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
CLN6-216ENST00000636876 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
CLN6-216ENST00000636876 L3MBTL2Q969R5 705 aa23.12■■□□□ 1.29
CLN6-216ENST00000636876 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
CLN6-216ENST00000636876 STAC3Q96MF2 364 aa23.11■■□□□ 1.29
CLN6-216ENST00000636876 TONSLQ96HA7 1378 aa23.11■■□□□ 1.29
CLN6-216ENST00000636876 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
CLN6-216ENST00000636876 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
CLN6-216ENST00000636876 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
CLN6-216ENST00000636876 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
CLN6-216ENST00000636876 BCANQ96GW7 911 aa23.08■■□□□ 1.29
CLN6-216ENST00000636876 NRXN3Q9Y4C0 1643 aa23.07■■□□□ 1.28
CLN6-216ENST00000636876 PIK3C2GO75747 1445 aa23.06■■□□□ 1.28
CLN6-216ENST00000636876 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
CLN6-216ENST00000636876 SLC26A8Q96RN1 970 aa23.05■■□□□ 1.28
CLN6-216ENST00000636876 DIP2AQ14689 1571 aa23.04■■□□□ 1.28
CLN6-216ENST00000636876 IQSEC2Q5JU85 1478 aa23.04■■□□□ 1.28
CLN6-216ENST00000636876 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
CLN6-216ENST00000636876 TBX22Q9Y458 520 aa23.03■■□□□ 1.28
CLN6-216ENST00000636876 ALKQ9UM73 1620 aa23.01■■□□□ 1.27
CLN6-216ENST00000636876 PRAG1Q86YV5 1406 aa23■■□□□ 1.27
CLN6-216ENST00000636876 C14orf93Q9H972 538 aaKnown RBP22.98■■□□□ 1.27
CLN6-216ENST00000636876 SETD1AO15047 1707 aaKnown RBP22.98■■□□□ 1.27
CLN6-216ENST00000636876 LAMC1P11047 1609 aa22.97■■□□□ 1.27
CLN6-216ENST00000636876 CFAP70Q5T0N1 1121 aa22.96■■□□□ 1.27
CLN6-216ENST00000636876 ZNF335Q9H4Z2 1342 aaPredicted RBP22.96■■□□□ 1.27
CLN6-216ENST00000636876 PIK3R4Q99570 1358 aa22.96■■□□□ 1.27
CLN6-216ENST00000636876 METP08581 1390 aa22.95■■□□□ 1.26
CLN6-216ENST00000636876 KIAA1210Q9ULL0 1709 aa22.93■■□□□ 1.26
CLN6-216ENST00000636876 DISP3Q9P2K9 1392 aa22.92■■□□□ 1.26
CLN6-216ENST00000636876 NBPF8Q3BBV2 869 aa22.92■■□□□ 1.26
CLN6-216ENST00000636876 ASXL1Q8IXJ9 1541 aa22.92■■□□□ 1.26
CLN6-216ENST00000636876 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
CLN6-216ENST00000636876 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
CLN6-216ENST00000636876 NWD1Q149M9 1564 aa22.9■■□□□ 1.26
CLN6-216ENST00000636876 KCNA6P17658 529 aa22.9■■□□□ 1.26
CLN6-216ENST00000636876 TMEM132EQ6IEE7 984 aa22.89■■□□□ 1.25
CLN6-216ENST00000636876 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
CLN6-216ENST00000636876 TRPM1Q7Z4N2 1603 aa22.88■■□□□ 1.25
CLN6-216ENST00000636876 STRCP1A6NGW2 1772 aa22.88■■□□□ 1.25
CLN6-216ENST00000636876 XRN1Q8IZH2 1706 aaKnown RBP22.86■■□□□ 1.25
CLN6-216ENST00000636876 ILDR2Q71H61 639 aa22.86■■□□□ 1.25
CLN6-216ENST00000636876 AMOTL2Q9Y2J4 779 aa22.86■■□□□ 1.25
CLN6-216ENST00000636876 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
CLN6-216ENST00000636876 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
CLN6-216ENST00000636876 NBPF1Q3BBV0 1214 aa22.85■■□□□ 1.25
CLN6-216ENST00000636876 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
CLN6-216ENST00000636876 NKTRP30414 1462 aaKnown RBP22.84■■□□□ 1.25
CLN6-216ENST00000636876 CPS1P31327 1500 aa22.83■■□□□ 1.25
CLN6-216ENST00000636876 ABCC11Q96J66 1382 aa22.82■■□□□ 1.24
CLN6-216ENST00000636876 STK26Q9P289 416 aa22.82■■□□□ 1.24
CLN6-216ENST00000636876 ROCK2O75116 1388 aaKnown RBP22.81■■□□□ 1.24
CLN6-216ENST00000636876 TECPR2O15040 1411 aa22.81■■□□□ 1.24
CLN6-216ENST00000636876 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
CLN6-216ENST00000636876 GPRASP1Q5JY77 1395 aa22.8■■□□□ 1.24
CLN6-216ENST00000636876 PTCH1Q13635 1447 aa22.8■■□□□ 1.24
CLN6-216ENST00000636876 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
CLN6-216ENST00000636876 PROSER2Q86WR7 435 aaPredicted RBP22.78■■□□□ 1.24
CLN6-216ENST00000636876 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
CLN6-216ENST00000636876 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
CLN6-216ENST00000636876 DLC1Q96QB1 1528 aa22.77■■□□□ 1.24
CLN6-216ENST00000636876 TRAK1Q9UPV9 953 aa22.76■■□□□ 1.23
CLN6-216ENST00000636876 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
CLN6-216ENST00000636876 CARD11Q9BXL7 1154 aa22.74■■□□□ 1.23
CLN6-216ENST00000636876 TMEM94Q12767 1356 aa22.74■■□□□ 1.23
CLN6-216ENST00000636876 FAM135BQ49AJ0 1406 aa22.74■■□□□ 1.23
CLN6-216ENST00000636876 ARHGEF28Q8N1W1 1705 aaKnown RBP22.71■■□□□ 1.23
CLN6-216ENST00000636876 RBM33Q96EV2 1170 aaKnown RBP22.71■■□□□ 1.23
CLN6-216ENST00000636876 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
CLN6-216ENST00000636876 XIRP1Q702N8 1843 aaKnown RBP22.71■■□□□ 1.23
CLN6-216ENST00000636876 WAPLQ7Z5K2 1190 aa22.7■■□□□ 1.22
CLN6-216ENST00000636876 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
CLN6-216ENST00000636876 PLEKHH1Q9ULM0 1364 aa22.69■■□□□ 1.22
CLN6-216ENST00000636876 POGKQ9P215 609 aa22.68■■□□□ 1.22
CLN6-216ENST00000636876 SOCS7O14512 581 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms