RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TRPM2O94759 1503 aa5.94□□□□□ -1.46
SCN1A-210ENST00000635776 IQGAP3Q86VI3 1631 aa5.94□□□□□ -1.46
SCN1A-210ENST00000635776 CDC42BPAQ5VT25 1732 aa5.94□□□□□ -1.46
SCN1A-210ENST00000635776 POGZQ7Z3K3 1410 aa5.94□□□□□ -1.46
SCN1A-210ENST00000635776 TCERG1O14776 1098 aaKnown RBP5.94□□□□□ -1.46
SCN1A-210ENST00000635776 TTC37Q6PGP7 1564 aa5.94□□□□□ -1.46
SCN1A-210ENST00000635776 CALD1Q05682 793 aaKnown RBP5.94□□□□□ -1.46
SCN1A-210ENST00000635776 NBPF1Q3BBV0 1214 aa5.94□□□□□ -1.46
SCN1A-210ENST00000635776 E9PSI1 815 aa5.93□□□□□ -1.46
SCN1A-210ENST00000635776 ANP32EQ9BTT0 268 aa5.93□□□□□ -1.46
SCN1A-210ENST00000635776 MYOM2P54296 1465 aa5.93□□□□□ -1.46
SCN1A-210ENST00000635776 MAPK8IP3Q9UPT6 1336 aa5.93□□□□□ -1.46
SCN1A-210ENST00000635776 NCBP3Q53F19 620 aaKnown RBP5.93□□□□□ -1.46
SCN1A-210ENST00000635776 NEURL4Q96JN8 1562 aa5.93□□□□□ -1.46
SCN1A-210ENST00000635776 ZCCHC11Q5TAX3 1644 aaKnown RBP5.93□□□□□ -1.46
SCN1A-210ENST00000635776 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
SCN1A-210ENST00000635776 RTL5Q5HYW3 569 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-210ENST00000635776 C14orf93Q9H972 538 aaKnown RBP5.93□□□□□ -1.46
SCN1A-210ENST00000635776 MYH16Q9H6N6 1097 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 DDRGK1Q96HY6 314 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 TSHZ2Q9NRE2 1034 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 LMTK2Q8IWU2 1503 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 ZFYVE16Q7Z3T8 1539 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 TESK2Q96S53 571 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 LRPPRCP42704 1394 aaKnown RBP5.92□□□□□ -1.46
SCN1A-210ENST00000635776 KDM5CP41229 1560 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 LAMC1P11047 1609 aa5.92□□□□□ -1.46
SCN1A-210ENST00000635776 PPP2R1AP30153 589 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 RRP1P56182 461 aaKnown RBP5.91□□□□□ -1.46
SCN1A-210ENST00000635776 CFAP70Q5T0N1 1121 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 PIK3C2GO75747 1445 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 ABCA9Q8IUA7 1624 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 SRPK2P78362 688 aaKnown RBP5.91□□□□□ -1.46
SCN1A-210ENST00000635776 ARHGAP31Q2M1Z3 1444 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 FANCIQ9NVI1 1328 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 FAM69CQ0P6D2 419 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 UPF2Q9HAU5 1272 aaKnown RBP5.91□□□□□ -1.46
SCN1A-210ENST00000635776 PLA2R1Q13018 1463 aa5.91□□□□□ -1.46
SCN1A-210ENST00000635776 CT47B1P0C2W7 299 aaPredicted RBP5.9□□□□□ -1.46
SCN1A-210ENST00000635776 RBM19Q9Y4C8 960 aaKnown RBP5.9□□□□□ -1.47
SCN1A-210ENST00000635776 PER1O15534 1290 aaPredicted RBP5.9□□□□□ -1.47
SCN1A-210ENST00000635776 CHMP4AQ9BY43 222 aa5.9□□□□□ -1.47
SCN1A-210ENST00000635776 CYB5RLQ6IPT4 315 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 CFAP44Q96MT7 982 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 TRAK1Q9UPV9 953 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 TET3O43151 1660 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 LMOD3Q0VAK6 560 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 ZBTB47Q9UFB7 747 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-210ENST00000635776 RUNDC1Q96C34 613 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 ASXL1Q8IXJ9 1541 aa5.89□□□□□ -1.47
SCN1A-210ENST00000635776 IPO8O15397 1037 aaKnown RBP5.88□□□□□ -1.47
SCN1A-210ENST00000635776 SALL2Q9Y467 1007 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-210ENST00000635776 EID1Q9Y6B2 187 aa5.88□□□□□ -1.47
SCN1A-210ENST00000635776 IRX6P78412 446 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-210ENST00000635776 ZFYVE9O95405 1425 aa5.88□□□□□ -1.47
SCN1A-210ENST00000635776 CENPQQ7L2Z9 268 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-210ENST00000635776 DISP3Q9P2K9 1392 aa5.88□□□□□ -1.47
SCN1A-210ENST00000635776 POLR3AO14802 1390 aaPredicted RBP5.87□□□□□ -1.47
SCN1A-210ENST00000635776 CDC42BPBQ9Y5S2 1711 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 NOS1P29475 1434 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 B4GALNT3Q6L9W6 998 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 ZNF428Q96B54 188 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 PMFBP1Q8TBY8 1022 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 ADGRF5Q8IZF2 1346 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 WDR63Q8IWG1 891 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 RNF123Q5XPI4 1314 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 EFCAB6Q5THR3 1501 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 ERCC6L2Q5T890 1561 aa5.87□□□□□ -1.47
SCN1A-210ENST00000635776 INO80Q9ULG1 1556 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-210ENST00000635776 PDE3AQ14432 1141 aa5.86□□□□□ -1.47
SCN1A-210ENST00000635776 PPM1GO15355 546 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-210ENST00000635776 AMER1Q5JTC6 1135 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-210ENST00000635776 ZNF692Q9BU19 519 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-210ENST00000635776 RAPGEF3O95398 923 aa5.86□□□□□ -1.47
SCN1A-210ENST00000635776 CCDC184Q52MB2 194 aa5.86□□□□□ -1.47
SCN1A-210ENST00000635776 U2AF1L5P0DN76 240 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-210ENST00000635776 U2AF1Q01081 240 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCN1A-210ENST00000635776 ANKRD36BQ8N2N9 1353 aa5.86□□□□□ -1.47
SCN1A-210ENST00000635776 ADAMTS8Q9UP79 889 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 SIRT1Q96EB6 747 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 ABCC11Q96J66 1382 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 HECW2Q9P2P5 1572 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 NPATQ14207 1427 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 RWDD1Q9H446 243 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-210ENST00000635776 PLPPR3Q6T4P5 718 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 SYNMO15061 1565 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 VWDEQ8N2E2 1590 aa5.85□□□□□ -1.47
SCN1A-210ENST00000635776 BLMP54132 1417 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-210ENST00000635776 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
SCN1A-210ENST00000635776 BECN1Q14457 450 aa5.84□□□□□ -1.47
SCN1A-210ENST00000635776 CCDC27Q2M243 656 aa5.84□□□□□ -1.47
SCN1A-210ENST00000635776 TRPM1Q7Z4N2 1603 aa5.84□□□□□ -1.47
SCN1A-210ENST00000635776 IDI1Q13907 227 aa5.84□□□□□ -1.47
SCN1A-210ENST00000635776 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.48
SCN1A-210ENST00000635776 U2SURPO15042 1029 aaKnown RBP5.83□□□□□ -1.48
SCN1A-210ENST00000635776 STK26Q9P289 416 aa5.83□□□□□ -1.48
SCN1A-210ENST00000635776 NSD3Q9BZ95 1437 aa5.83□□□□□ -1.48
SCN1A-210ENST00000635776 APAF1O14727 1248 aa5.83□□□□□ -1.48
SCN1A-210ENST00000635776 SLFN5Q08AF3 891 aa5.83□□□□□ -1.48
SCN1A-210ENST00000635776 SETBP1Q9Y6X0 1596 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms