RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 LRRC7Q96NW7 1537 aa27.44■■□□□ 1.98
CLN6-210ENST00000635747 SLC26A8Q96RN1 970 aa27.43■■□□□ 1.98
CLN6-210ENST00000635747 PLEKHG1Q9ULL1 1385 aa27.43■■□□□ 1.98
CLN6-210ENST00000635747 KCNA6P17658 529 aa27.42■■□□□ 1.98
CLN6-210ENST00000635747 STRCP1A6NGW2 1772 aa27.4■■□□□ 1.98
CLN6-210ENST00000635747 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
CLN6-210ENST00000635747 PIP4K2BP78356 416 aa27.37■■□□□ 1.97
CLN6-210ENST00000635747 SLC4A1APQ9BWU0 796 aaKnown RBP27.37■■□□□ 1.97
CLN6-210ENST00000635747 MYO5BQ9ULV0 1848 aa27.36■■□□□ 1.97
CLN6-210ENST00000635747 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
CLN6-210ENST00000635747 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
CLN6-210ENST00000635747 TBX22Q9Y458 520 aa27.35■■□□□ 1.97
CLN6-210ENST00000635747 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
CLN6-210ENST00000635747 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
CLN6-210ENST00000635747 NUTM2DQ5VT03 806 aaPredicted RBP27.3■■□□□ 1.96
CLN6-210ENST00000635747 TRPM2O94759 1503 aa27.3■■□□□ 1.96
CLN6-210ENST00000635747 SENP3Q9H4L4 574 aaPredicted RBP27.29■■□□□ 1.96
CLN6-210ENST00000635747 NKTRP30414 1462 aaKnown RBP27.28■■□□□ 1.96
CLN6-210ENST00000635747 TMEM94Q12767 1356 aa27.28■■□□□ 1.96
CLN6-210ENST00000635747 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
CLN6-210ENST00000635747 NWD1Q149M9 1564 aa27.25■■□□□ 1.95
CLN6-210ENST00000635747 DIP2AQ14689 1571 aa27.24■■□□□ 1.95
CLN6-210ENST00000635747 HSPA1LP34931 641 aa27.24■■□□□ 1.95
CLN6-210ENST00000635747 ADAMTS13Q76LX8 1427 aa27.24■■□□□ 1.95
CLN6-210ENST00000635747 ALKQ9UM73 1620 aa27.23■■□□□ 1.95
CLN6-210ENST00000635747 CLTCL1P53675 1640 aa27.22■■□□□ 1.95
CLN6-210ENST00000635747 MPHOSPH9Q99550 1183 aa27.2■■□□□ 1.94
CLN6-210ENST00000635747 SETD5Q9C0A6 1442 aa27.19■■□□□ 1.94
CLN6-210ENST00000635747 CHD2O14647 1828 aaKnown RBP27.18■■□□□ 1.94
CLN6-210ENST00000635747 NCOA3Q9Y6Q9 1424 aa27.17■■□□□ 1.94
CLN6-210ENST00000635747 VGFO15240 615 aaPredicted RBP27.17■■□□□ 1.94
CLN6-210ENST00000635747 XIRP1Q702N8 1843 aaKnown RBP27.17■■□□□ 1.94
CLN6-210ENST00000635747 MSH6P52701 1360 aa27.17■■□□□ 1.94
CLN6-210ENST00000635747 DISP3Q9P2K9 1392 aa27.17■■□□□ 1.94
CLN6-210ENST00000635747 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
CLN6-210ENST00000635747 KIF1BO60333 1816 aa27.16■■□□□ 1.94
CLN6-210ENST00000635747 RBM33Q96EV2 1170 aaKnown RBP27.16■■□□□ 1.94
CLN6-210ENST00000635747 SETBP1Q9Y6X0 1596 aa27.14■■□□□ 1.94
CLN6-210ENST00000635747 AMOTL2Q9Y2J4 779 aa27.14■■□□□ 1.94
CLN6-210ENST00000635747 FOXD1Q16676 465 aa27.13■■□□□ 1.93
CLN6-210ENST00000635747 FAM135BQ49AJ0 1406 aa27.13■■□□□ 1.93
CLN6-210ENST00000635747 NEXMIFQ5QGS0 1516 aa27.12■■□□□ 1.93
CLN6-210ENST00000635747 CCDC144AA2RUR9 1427 aa27.1■■□□□ 1.93
CLN6-210ENST00000635747 C14orf37Q86TY3 774 aa27.09■■□□□ 1.93
CLN6-210ENST00000635747 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
CLN6-210ENST00000635747 C19orf44Q9H6X5 657 aa27.06■■□□□ 1.92
CLN6-210ENST00000635747 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
CLN6-210ENST00000635747 RAB3GAP2Q9H2M9 1393 aa27.06■■□□□ 1.92
CLN6-210ENST00000635747 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
CLN6-210ENST00000635747 CADPS2Q86UW7 1296 aa27.04■■□□□ 1.92
CLN6-210ENST00000635747 METP08581 1390 aa27.04■■□□□ 1.92
CLN6-210ENST00000635747 ATF3P18847 181 aa27.02■■□□□ 1.92
CLN6-210ENST00000635747 HRCP23327 699 aa27.02■■□□□ 1.92
CLN6-210ENST00000635747 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
CLN6-210ENST00000635747 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
CLN6-210ENST00000635747 SPATA31E1Q6ZUB1 1445 aa26.97■■□□□ 1.91
CLN6-210ENST00000635747 XRN1Q8IZH2 1706 aaKnown RBP26.96■■□□□ 1.91
CLN6-210ENST00000635747 ROBO1Q9Y6N7 1651 aa26.95■■□□□ 1.9
CLN6-210ENST00000635747 DCCP43146 1447 aa26.94■■□□□ 1.9
CLN6-210ENST00000635747 PPLO60437 1756 aa26.93■■□□□ 1.9
CLN6-210ENST00000635747 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.91■■□□□ 1.9
CLN6-210ENST00000635747 MED1Q15648 1581 aaPredicted RBP26.9■■□□□ 1.9
CLN6-210ENST00000635747 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
CLN6-210ENST00000635747 ILDR2Q71H61 639 aa26.88■■□□□ 1.89
CLN6-210ENST00000635747 PTCH1Q13635 1447 aa26.88■■□□□ 1.89
CLN6-210ENST00000635747 PRAG1Q86YV5 1406 aa26.86■■□□□ 1.89
CLN6-210ENST00000635747 ADGRL3Q9HAR2 1447 aa26.85■■□□□ 1.89
CLN6-210ENST00000635747 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
CLN6-210ENST00000635747 SETD1AO15047 1707 aaKnown RBP26.84■■□□□ 1.89
CLN6-210ENST00000635747 ROBO2Q9HCK4 1378 aa26.82■■□□□ 1.88
CLN6-210ENST00000635747 BRINP3Q76B58 766 aa26.8■■□□□ 1.88
CLN6-210ENST00000635747 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
CLN6-210ENST00000635747 IFT172Q9UG01 1749 aa26.79■■□□□ 1.88
CLN6-210ENST00000635747 JCADQ9P266 1359 aa26.79■■□□□ 1.88
CLN6-210ENST00000635747 PHLPP1O60346 1717 aa26.79■■□□□ 1.88
CLN6-210ENST00000635747 MST1RQ04912 1400 aa26.78■■□□□ 1.88
CLN6-210ENST00000635747 LRPPRCP42704 1394 aaKnown RBP26.76■■□□□ 1.87
CLN6-210ENST00000635747 STAC3Q96MF2 364 aa26.76■■□□□ 1.87
CLN6-210ENST00000635747 ABCC11Q96J66 1382 aa26.75■■□□□ 1.87
CLN6-210ENST00000635747 C14orf93Q9H972 538 aaKnown RBP26.75■■□□□ 1.87
CLN6-210ENST00000635747 AHDC1Q5TGY3 1603 aaPredicted RBP26.75■■□□□ 1.87
CLN6-210ENST00000635747 MYOM2P54296 1465 aa26.74■■□□□ 1.87
CLN6-210ENST00000635747 STK26Q9P289 416 aa26.74■■□□□ 1.87
CLN6-210ENST00000635747 SOCS7O14512 581 aa26.73■■□□□ 1.87
CLN6-210ENST00000635747 TECPR2O15040 1411 aa26.73■■□□□ 1.87
CLN6-210ENST00000635747 TMEM132EQ6IEE7 984 aa26.72■■□□□ 1.87
CLN6-210ENST00000635747 NALCNQ8IZF0 1738 aa26.72■■□□□ 1.87
CLN6-210ENST00000635747 NRXN1Q9ULB1 1477 aa26.72■■□□□ 1.87
CLN6-210ENST00000635747 COL16A1Q07092 1604 aaPredicted RBP26.71■■□□□ 1.87
CLN6-210ENST00000635747 ASXL1Q8IXJ9 1541 aa26.7■■□□□ 1.87
CLN6-210ENST00000635747 SIRT1Q96EB6 747 aa26.7■■□□□ 1.86
CLN6-210ENST00000635747 DHX57Q6P158 1386 aaKnown RBP26.69■■□□□ 1.86
CLN6-210ENST00000635747 C1orf167Q5SNV9 1468 aa26.68■■□□□ 1.86
CLN6-210ENST00000635747 SPATA31A6Q5VVP1 1343 aa26.68■■□□□ 1.86
CLN6-210ENST00000635747 YTHDC2Q9H6S0 1430 aaKnown RBP26.68■■□□□ 1.86
CLN6-210ENST00000635747 CFAP70Q5T0N1 1121 aa26.68■■□□□ 1.86
CLN6-210ENST00000635747 DCAF11Q8TEB1 546 aa26.66■■□□□ 1.86
CLN6-210ENST00000635747 LRRC59Q96AG4 307 aaKnown RBP26.66■■□□□ 1.86
CLN6-210ENST00000635747 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
CLN6-210ENST00000635747 LAMC1P11047 1609 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms