RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 DEPDC5O75140 1603 aa9.87□□□□□ -0.83
BRCA1-230ENST00000634433 SETD1BQ9UPS6 1966 aaKnown RBP9.86□□□□□ -0.83
BRCA1-230ENST00000634433 RGL3Q3MIN7 710 aa9.86□□□□□ -0.83
BRCA1-230ENST00000634433 MLH3Q9UHC1 1453 aa9.86□□□□□ -0.83
BRCA1-230ENST00000634433 FER1L4A9Z1Z3 1794 aa9.85□□□□□ -0.83
BRCA1-230ENST00000634433 KIF7Q2M1P5 1343 aa9.85□□□□□ -0.83
BRCA1-230ENST00000634433 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-230ENST00000634433 ROCK2O75116 1388 aaKnown RBP9.85□□□□□ -0.83
BRCA1-230ENST00000634433 PTPRTO14522 1441 aa9.85□□□□□ -0.83
BRCA1-230ENST00000634433 PRAG1Q86YV5 1406 aa9.85□□□□□ -0.83
BRCA1-230ENST00000634433 VWDEQ8N2E2 1590 aa9.84□□□□□ -0.83
BRCA1-230ENST00000634433 POLR1AO95602 1720 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-230ENST00000634433 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
BRCA1-230ENST00000634433 TET3O43151 1660 aa9.84□□□□□ -0.83
BRCA1-230ENST00000634433 KDM5CP41229 1560 aa9.84□□□□□ -0.83
BRCA1-230ENST00000634433 A2MP01023 1474 aa9.84□□□□□ -0.83
BRCA1-230ENST00000634433 DMRT2Q9Y5R5 561 aa9.84□□□□□ -0.83
BRCA1-230ENST00000634433 SPATA31D1Q6ZQQ2 1576 aa9.83□□□□□ -0.84
BRCA1-230ENST00000634433 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
BRCA1-230ENST00000634433 TRPM2O94759 1503 aa9.83□□□□□ -0.84
BRCA1-230ENST00000634433 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-230ENST00000634433 NBR1Q14596 966 aa9.83□□□□□ -0.84
BRCA1-230ENST00000634433 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
BRCA1-230ENST00000634433 GPRASP1Q5JY77 1395 aa9.82□□□□□ -0.84
BRCA1-230ENST00000634433 UBE2Q2Q8WVN8 375 aa9.82□□□□□ -0.84
BRCA1-230ENST00000634433 E9PCH4 1651 aa9.82□□□□□ -0.84
BRCA1-230ENST00000634433 LMTK2Q8IWU2 1503 aa9.81□□□□□ -0.84
BRCA1-230ENST00000634433 ST20-MTHFSA0A0A6YYL1 179 aa9.81□□□□□ -0.84
BRCA1-230ENST00000634433 CDK11BP21127 795 aaKnown RBP9.81□□□□□ -0.84
BRCA1-230ENST00000634433 TRPM1Q7Z4N2 1603 aa9.8□□□□□ -0.84
BRCA1-230ENST00000634433 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
BRCA1-230ENST00000634433 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
BRCA1-230ENST00000634433 LAMC1P11047 1609 aa9.8□□□□□ -0.84
BRCA1-230ENST00000634433 PRKRIP1Q9H875 184 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-230ENST00000634433 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
BRCA1-230ENST00000634433 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 YEATS2Q9ULM3 1422 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 DISP3Q9P2K9 1392 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 CNKSR2Q8WXI2 1034 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 POLR3GLQ9BT43 218 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
BRCA1-230ENST00000634433 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.84
BRCA1-230ENST00000634433 CEP152O94986 1710 aa9.77□□□□□ -0.85
BRCA1-230ENST00000634433 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
BRCA1-230ENST00000634433 RAPGEF3O95398 923 aa9.77□□□□□ -0.85
BRCA1-230ENST00000634433 REREQ9P2R6 1566 aa9.77□□□□□ -0.85
BRCA1-230ENST00000634433 GGT6Q6P531 493 aa9.76□□□□□ -0.85
BRCA1-230ENST00000634433 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
BRCA1-230ENST00000634433 WASHC2CQ9Y4E1 1318 aa9.76□□□□□ -0.85
BRCA1-230ENST00000634433 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
BRCA1-230ENST00000634433 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
BRCA1-230ENST00000634433 TMF1P82094 1093 aa9.75□□□□□ -0.85
BRCA1-230ENST00000634433 ABCA6Q8N139 1617 aa9.74□□□□□ -0.85
BRCA1-230ENST00000634433 PDE4CQ08493 712 aa9.74□□□□□ -0.85
BRCA1-230ENST00000634433 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
BRCA1-230ENST00000634433 MRS2Q9HD23 443 aa9.73□□□□□ -0.85
BRCA1-230ENST00000634433 RPGRIP1LQ68CZ1 1315 aa9.73□□□□□ -0.85
BRCA1-230ENST00000634433 DIP2CQ9Y2E4 1556 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 KIF1BO60333 1816 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 MYOM2P54296 1465 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 EIF3AQ14152 1382 aaKnown RBP9.72□□□□□ -0.85
BRCA1-230ENST00000634433 RALBP1Q15311 655 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 ILDR2Q71H61 639 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 TESK2Q96S53 571 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
BRCA1-230ENST00000634433 ABCC3O15438 1527 aa9.71□□□□□ -0.85
BRCA1-230ENST00000634433 SCAF11Q99590 1463 aaKnown RBP9.71□□□□□ -0.85
BRCA1-230ENST00000634433 KIAA1210Q9ULL0 1709 aa9.71□□□□□ -0.85
BRCA1-230ENST00000634433 NPATQ14207 1427 aa9.71□□□□□ -0.86
BRCA1-230ENST00000634433 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
BRCA1-230ENST00000634433 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCA1-230ENST00000634433 LTBP4Q8N2S1 1624 aa9.7□□□□□ -0.86
BRCA1-230ENST00000634433 MROH2AA6NES4 1674 aa9.69□□□□□ -0.86
BRCA1-230ENST00000634433 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
BRCA1-230ENST00000634433 AGLP35573 1532 aa9.69□□□□□ -0.86
BRCA1-230ENST00000634433 NOS1P29475 1434 aa9.69□□□□□ -0.86
BRCA1-230ENST00000634433 ZC3H13Q5T200 1668 aaKnown RBP9.69□□□□□ -0.86
BRCA1-230ENST00000634433 ADGRB3O60242 1522 aa9.68□□□□□ -0.86
BRCA1-230ENST00000634433 SLC52A1Q9NWF4 448 aa9.68□□□□□ -0.86
BRCA1-230ENST00000634433 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
BRCA1-230ENST00000634433 HSPA2P54652 639 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 FAM9BQ8IZU0 186 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 C3P01024 1663 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 TMC1Q8TDI8 760 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 MYBBP1AQ9BQG0 1328 aaKnown RBP9.67□□□□□ -0.86
BRCA1-230ENST00000634433 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
BRCA1-230ENST00000634433 NEFLP07196 543 aa9.66□□□□□ -0.86
BRCA1-230ENST00000634433 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-230ENST00000634433 CCDC184Q52MB2 194 aa9.66□□□□□ -0.86
BRCA1-230ENST00000634433 ADGRF5Q8IZF2 1346 aa9.66□□□□□ -0.86
BRCA1-230ENST00000634433 VGFO15240 615 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-230ENST00000634433 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
BRCA1-230ENST00000634433 BRD4O60885 1362 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-230ENST00000634433 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
BRCA1-230ENST00000634433 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-230ENST00000634433 BRD2P25440 801 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms