RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
ATP7B-211ENST00000634308 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
ATP7B-211ENST00000634308 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
ATP7B-211ENST00000634308 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
ATP7B-211ENST00000634308 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
ATP7B-211ENST00000634308 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
ATP7B-211ENST00000634308 NUTM2AQ8IVF1 878 aaPredicted RBP12.19□□□□□ -0.46
ATP7B-211ENST00000634308 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
ATP7B-211ENST00000634308 ANKRD30BQ9BXX2 1392 aa12.19□□□□□ -0.46
ATP7B-211ENST00000634308 NCOA1Q15788 1441 aa12.18□□□□□ -0.46
ATP7B-211ENST00000634308 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
ATP7B-211ENST00000634308 RRP9O43818 475 aaKnown RBP12.18□□□□□ -0.46
ATP7B-211ENST00000634308 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
ATP7B-211ENST00000634308 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
ATP7B-211ENST00000634308 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
ATP7B-211ENST00000634308 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
ATP7B-211ENST00000634308 CASC1Q6TDU7 716 aa12.17□□□□□ -0.46
ATP7B-211ENST00000634308 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
ATP7B-211ENST00000634308 EIF3AQ14152 1382 aaKnown RBP12.17□□□□□ -0.46
ATP7B-211ENST00000634308 APBB1O00213 710 aa12.17□□□□□ -0.46
ATP7B-211ENST00000634308 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
ATP7B-211ENST00000634308 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
ATP7B-211ENST00000634308 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
ATP7B-211ENST00000634308 CHMP4BQ9H444 224 aaKnown RBP12.16□□□□□ -0.46
ATP7B-211ENST00000634308 SUPT6HQ7KZ85 1726 aaKnown RBP12.16□□□□□ -0.46
ATP7B-211ENST00000634308 DNTTIP2Q5QJE6 756 aaKnown RBP12.16□□□□□ -0.46
ATP7B-211ENST00000634308 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
ATP7B-211ENST00000634308 DAPK1P53355 1430 aa12.15□□□□□ -0.46
ATP7B-211ENST00000634308 CDK13Q14004 1512 aaKnown RBP12.14□□□□□ -0.47
ATP7B-211ENST00000634308 PTPN23Q9H3S7 1636 aa12.14□□□□□ -0.47
ATP7B-211ENST00000634308 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
ATP7B-211ENST00000634308 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
ATP7B-211ENST00000634308 ARID3AQ99856 593 aa12.13□□□□□ -0.47
ATP7B-211ENST00000634308 MSNP26038 577 aaKnown RBP12.13□□□□□ -0.47
ATP7B-211ENST00000634308 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
ATP7B-211ENST00000634308 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
ATP7B-211ENST00000634308 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
ATP7B-211ENST00000634308 BCAR3O75815 825 aa12.12□□□□□ -0.47
ATP7B-211ENST00000634308 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
ATP7B-211ENST00000634308 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
ATP7B-211ENST00000634308 EPRSP07814 1512 aaKnown RBP12.11□□□□□ -0.47
ATP7B-211ENST00000634308 ZKSCAN2Q63HK3 967 aa12.11□□□□□ -0.47
ATP7B-211ENST00000634308 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
ATP7B-211ENST00000634308 SOX12O15370 315 aa12.1□□□□□ -0.47
ATP7B-211ENST00000634308 ARHGAP5Q13017 1502 aa12.1□□□□□ -0.47
ATP7B-211ENST00000634308 RPRD2Q5VT52 1461 aaKnown RBP12.09□□□□□ -0.47
ATP7B-211ENST00000634308 NGDNQ8NEJ9 315 aaKnown RBP12.09□□□□□ -0.47
ATP7B-211ENST00000634308 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
ATP7B-211ENST00000634308 ROCK1Q13464 1354 aa12.08□□□□□ -0.48
ATP7B-211ENST00000634308 ABCC5O15440 1437 aa12.08□□□□□ -0.48
ATP7B-211ENST00000634308 DISP3Q9P2K9 1392 aa12.08□□□□□ -0.48
ATP7B-211ENST00000634308 EVA1CP58658 441 aa12.07□□□□□ -0.48
ATP7B-211ENST00000634308 HDGFL2Q7Z4V5 671 aaPredicted RBP12.07□□□□□ -0.48
ATP7B-211ENST00000634308 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
ATP7B-211ENST00000634308 TROQ12816 1431 aaPredicted RBP12.06□□□□□ -0.48
ATP7B-211ENST00000634308 CDK11BP21127 795 aaKnown RBP12.06□□□□□ -0.48
ATP7B-211ENST00000634308 DZIP1LQ8IYY4 767 aaKnown RBP12.06□□□□□ -0.48
ATP7B-211ENST00000634308 HECW1Q76N89 1606 aa12.06□□□□□ -0.48
ATP7B-211ENST00000634308 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
ATP7B-211ENST00000634308 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
ATP7B-211ENST00000634308 DDX11L8A8MPP1 907 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 NPHP1O15259 732 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 RUNDC1Q96C34 613 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
ATP7B-211ENST00000634308 CFAP70Q5T0N1 1121 aa12.04□□□□□ -0.48
ATP7B-211ENST00000634308 C22orf23Q9BZE7 217 aa12.04□□□□□ -0.48
ATP7B-211ENST00000634308 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
ATP7B-211ENST00000634308 LNPKQ9C0E8 428 aa12.03□□□□□ -0.48
ATP7B-211ENST00000634308 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
ATP7B-211ENST00000634308 TERF2IPQ9NYB0 399 aa12.03□□□□□ -0.48
ATP7B-211ENST00000634308 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
ATP7B-211ENST00000634308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.02□□□□□ -0.483e-6■■□□□ 13.8
ATP7B-211ENST00000634308 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.48
ATP7B-211ENST00000634308 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.48
ATP7B-211ENST00000634308 DDX19BQ9UMR2 479 aa12.02□□□□□ -0.48
ATP7B-211ENST00000634308 IQGAP2Q13576 1575 aa12.02□□□□□ -0.49
ATP7B-211ENST00000634308 TPM2P07951 284 aa12.02□□□□□ -0.49
ATP7B-211ENST00000634308 PTMSP20962 102 aa12.02□□□□□ -0.49
ATP7B-211ENST00000634308 MTHFSP49914 203 aa12.02□□□□□ -0.49
ATP7B-211ENST00000634308 PDE3AQ14432 1141 aa12.02□□□□□ -0.49
ATP7B-211ENST00000634308 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
ATP7B-211ENST00000634308 FOXD4L5Q5VV16 416 aaPredicted RBP12.02□□□□□ -0.49
ATP7B-211ENST00000634308 FOXD4L4Q8WXT5 416 aaPredicted RBP12.02□□□□□ -0.49
ATP7B-211ENST00000634308 ADGRL1O94910 1474 aa12.02□□□□□ -0.49
ATP7B-211ENST00000634308 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
ATP7B-211ENST00000634308 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
ATP7B-211ENST00000634308 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
ATP7B-211ENST00000634308 SLFN5Q08AF3 891 aa12□□□□□ -0.49
ATP7B-211ENST00000634308 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
ATP7B-211ENST00000634308 NGLY1Q96IV0 654 aa12□□□□□ -0.49
ATP7B-211ENST00000634308 MRE11P49959 708 aa12□□□□□ -0.49
ATP7B-211ENST00000634308 PSME1Q06323 249 aa12□□□□□ -0.49
ATP7B-211ENST00000634308 CFAP44Q96MT7 982 aa12□□□□□ -0.49
ATP7B-211ENST00000634308 TMEM132EQ6IEE7 984 aa12□□□□□ -0.49
ATP7B-211ENST00000634308 MCCP23508 829 aa11.99□□□□□ -0.49
ATP7B-211ENST00000634308 RIPK4P57078 832 aa11.99□□□□□ -0.49
ATP7B-211ENST00000634308 OS9Q13438 667 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms