RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 MYOM2P54296 1465 aa20.41■□□□□ 0.86
PHACTR4-209ENST00000633371 NRXN1Q9ULB1 1477 aa20.41■□□□□ 0.86
PHACTR4-209ENST00000633371 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
PHACTR4-209ENST00000633371 ADGRF5Q8IZF2 1346 aa20.4■□□□□ 0.86
PHACTR4-209ENST00000633371 CEP170BQ9Y4F5 1589 aaPredicted RBP20.39■□□□□ 0.85
PHACTR4-209ENST00000633371 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
PHACTR4-209ENST00000633371 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
PHACTR4-209ENST00000633371 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
PHACTR4-209ENST00000633371 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
PHACTR4-209ENST00000633371 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
PHACTR4-209ENST00000633371 STAG3Q9UJ98 1225 aa20.35■□□□□ 0.85
PHACTR4-209ENST00000633371 ARHGAP23Q9P227 1491 aa20.35■□□□□ 0.85
PHACTR4-209ENST00000633371 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
PHACTR4-209ENST00000633371 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
PHACTR4-209ENST00000633371 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
PHACTR4-209ENST00000633371 SLIT1O75093 1534 aa20.33■□□□□ 0.85
PHACTR4-209ENST00000633371 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
PHACTR4-209ENST00000633371 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
PHACTR4-209ENST00000633371 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
PHACTR4-209ENST00000633371 VGFO15240 615 aaPredicted RBP20.29■□□□□ 0.84
PHACTR4-209ENST00000633371 LTKP29376 864 aa20.29■□□□□ 0.84
PHACTR4-209ENST00000633371 SETD1AO15047 1707 aaKnown RBP20.29■□□□□ 0.84
PHACTR4-209ENST00000633371 GPRASP1Q5JY77 1395 aa20.27■□□□□ 0.84
PHACTR4-209ENST00000633371 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
PHACTR4-209ENST00000633371 THEMISQ8N1K5 641 aaPredicted RBP20.27■□□□□ 0.84
PHACTR4-209ENST00000633371 LAMC1P11047 1609 aa20.27■□□□□ 0.83
PHACTR4-209ENST00000633371 IQGAP1P46940 1657 aa20.26■□□□□ 0.83
PHACTR4-209ENST00000633371 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
PHACTR4-209ENST00000633371 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
PHACTR4-209ENST00000633371 ASXL1Q8IXJ9 1541 aa20.24■□□□□ 0.83
PHACTR4-209ENST00000633371 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
PHACTR4-209ENST00000633371 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
PHACTR4-209ENST00000633371 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
PHACTR4-209ENST00000633371 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
PHACTR4-209ENST00000633371 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
PHACTR4-209ENST00000633371 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
PHACTR4-209ENST00000633371 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
PHACTR4-209ENST00000633371 PLEKHG1Q9ULL1 1385 aa20.2■□□□□ 0.82
PHACTR4-209ENST00000633371 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
PHACTR4-209ENST00000633371 POLR1AO95602 1720 aaPredicted RBP20.19■□□□□ 0.82
PHACTR4-209ENST00000633371 MED14O60244 1454 aa20.19■□□□□ 0.82
PHACTR4-209ENST00000633371 LMTK3Q96Q04 1460 aa20.19■□□□□ 0.82
PHACTR4-209ENST00000633371 HSPA5P11021 654 aaKnown RBP20.18■□□□□ 0.82
PHACTR4-209ENST00000633371 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
PHACTR4-209ENST00000633371 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
PHACTR4-209ENST00000633371 CARD11Q9BXL7 1154 aa20.17■□□□□ 0.82
PHACTR4-209ENST00000633371 HIRIP3Q9BW71 556 aaPredicted RBP20.16■□□□□ 0.82
PHACTR4-209ENST00000633371 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
PHACTR4-209ENST00000633371 USP47Q96K76 1375 aa20.15■□□□□ 0.82
PHACTR4-209ENST00000633371 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
PHACTR4-209ENST00000633371 METP08581 1390 aa20.13■□□□□ 0.81
PHACTR4-209ENST00000633371 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.81
PHACTR4-209ENST00000633371 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
PHACTR4-209ENST00000633371 NCKAP5LQ9HCH0 1330 aa20.12■□□□□ 0.81
PHACTR4-209ENST00000633371 HSPA2P54652 639 aa20.12■□□□□ 0.81
PHACTR4-209ENST00000633371 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
PHACTR4-209ENST00000633371 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
PHACTR4-209ENST00000633371 SLC26A8Q96RN1 970 aa20.09■□□□□ 0.81
PHACTR4-209ENST00000633371 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
PHACTR4-209ENST00000633371 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
PHACTR4-209ENST00000633371 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
PHACTR4-209ENST00000633371 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.8
PHACTR4-209ENST00000633371 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
PHACTR4-209ENST00000633371 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
PHACTR4-209ENST00000633371 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
PHACTR4-209ENST00000633371 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
PHACTR4-209ENST00000633371 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
PHACTR4-209ENST00000633371 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
PHACTR4-209ENST00000633371 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
PHACTR4-209ENST00000633371 BCANQ96GW7 911 aa20.04■□□□□ 0.8
PHACTR4-209ENST00000633371 TESK2Q96S53 571 aa20.04■□□□□ 0.8
PHACTR4-209ENST00000633371 XRN1Q8IZH2 1706 aaKnown RBP20.03■□□□□ 0.8
PHACTR4-209ENST00000633371 STK26Q9P289 416 aa20.03■□□□□ 0.8
PHACTR4-209ENST00000633371 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
PHACTR4-209ENST00000633371 QRICH2Q9H0J4 1663 aa20.03■□□□□ 0.8
PHACTR4-209ENST00000633371 DLC1Q96QB1 1528 aa20.02■□□□□ 0.8
PHACTR4-209ENST00000633371 TECPR2O15040 1411 aa20.02■□□□□ 0.79
PHACTR4-209ENST00000633371 CPS1P31327 1500 aa20■□□□□ 0.79
PHACTR4-209ENST00000633371 STRCP1A6NGW2 1772 aa19.98■□□□□ 0.79
PHACTR4-209ENST00000633371 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
PHACTR4-209ENST00000633371 PLEKHH1Q9ULM0 1364 aa19.97■□□□□ 0.79
PHACTR4-209ENST00000633371 EIF3AQ14152 1382 aaKnown RBP19.96■□□□□ 0.79
PHACTR4-209ENST00000633371 ROBO2Q9HCK4 1378 aa19.96■□□□□ 0.79
PHACTR4-209ENST00000633371 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
PHACTR4-209ENST00000633371 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
PHACTR4-209ENST00000633371 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.79
PHACTR4-209ENST00000633371 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
PHACTR4-209ENST00000633371 SIRT1Q96EB6 747 aa19.95■□□□□ 0.78
PHACTR4-209ENST00000633371 AMOTL2Q9Y2J4 779 aa19.95■□□□□ 0.78
PHACTR4-209ENST00000633371 SBNO2Q9Y2G9 1366 aa19.95■□□□□ 0.78
PHACTR4-209ENST00000633371 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.94■□□□□ 0.78
PHACTR4-209ENST00000633371 PRAM1Q96QH2 718 aa19.94■□□□□ 0.78
PHACTR4-209ENST00000633371 NWD1Q149M9 1564 aa19.94■□□□□ 0.78
PHACTR4-209ENST00000633371 CCDC7Q96M83 1385 aa19.94■□□□□ 0.78
PHACTR4-209ENST00000633371 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
PHACTR4-209ENST00000633371 KIF7Q2M1P5 1343 aa19.93■□□□□ 0.78
PHACTR4-209ENST00000633371 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
PHACTR4-209ENST00000633371 KCNA6P17658 529 aa19.91■□□□□ 0.78
PHACTR4-209ENST00000633371 PTCH1Q13635 1447 aa19.91■□□□□ 0.78
PHACTR4-209ENST00000633371 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms