RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
UBE3A-220ENST00000630424 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
UBE3A-220ENST00000630424 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
UBE3A-220ENST00000630424 E9PSI1 815 aa17.44■□□□□ 0.38
UBE3A-220ENST00000630424 CPLX2Q6PUV4 134 aaKnown RBP17.44■□□□□ 0.38
UBE3A-220ENST00000630424 RBM19Q9Y4C8 960 aaKnown RBP17.44■□□□□ 0.38
UBE3A-220ENST00000630424 RBM33Q96EV2 1170 aaKnown RBP17.43■□□□□ 0.38
UBE3A-220ENST00000630424 IFIT2P09913 472 aaKnown RBP17.42■□□□□ 0.38
UBE3A-220ENST00000630424 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
UBE3A-220ENST00000630424 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
UBE3A-220ENST00000630424 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
UBE3A-220ENST00000630424 USP47Q96K76 1375 aa17.42■□□□□ 0.38
UBE3A-220ENST00000630424 PLIN1O60240 522 aa17.41■□□□□ 0.38
UBE3A-220ENST00000630424 HMOX1P09601 288 aa17.41■□□□□ 0.38
UBE3A-220ENST00000630424 ZNF644Q9H582 1327 aaPredicted RBP17.41■□□□□ 0.38
UBE3A-220ENST00000630424 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
UBE3A-220ENST00000630424 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
UBE3A-220ENST00000630424 AFAP1Q8N556 730 aa17.4■□□□□ 0.38
UBE3A-220ENST00000630424 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
UBE3A-220ENST00000630424 WIZO95785 1651 aa17.4■□□□□ 0.38
UBE3A-220ENST00000630424 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
UBE3A-220ENST00000630424 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
UBE3A-220ENST00000630424 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBE3A-220ENST00000630424 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
UBE3A-220ENST00000630424 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
UBE3A-220ENST00000630424 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
UBE3A-220ENST00000630424 MCTP1Q6DN14 999 aa17.39■□□□□ 0.37
UBE3A-220ENST00000630424 CHMP4CQ96CF2 233 aa17.39■□□□□ 0.37
UBE3A-220ENST00000630424 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
UBE3A-220ENST00000630424 FOXD4L6Q3SYB3 417 aaPredicted RBP17.39■□□□□ 0.37
UBE3A-220ENST00000630424 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.37
UBE3A-220ENST00000630424 TPD52L1Q16890 204 aaPredicted RBP17.38■□□□□ 0.37
UBE3A-220ENST00000630424 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
UBE3A-220ENST00000630424 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
UBE3A-220ENST00000630424 RUFY2Q8WXA3 655 aa17.38■□□□□ 0.37
UBE3A-220ENST00000630424 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
UBE3A-220ENST00000630424 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
UBE3A-220ENST00000630424 CPLX1O14810 134 aa17.37■□□□□ 0.37
UBE3A-220ENST00000630424 TRDNQ13061 729 aa17.37■□□□□ 0.37
UBE3A-220ENST00000630424 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
UBE3A-220ENST00000630424 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
UBE3A-220ENST00000630424 TPM3P06753 285 aa17.36■□□□□ 0.37
UBE3A-220ENST00000630424 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
UBE3A-220ENST00000630424 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
UBE3A-220ENST00000630424 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
UBE3A-220ENST00000630424 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
UBE3A-220ENST00000630424 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
UBE3A-220ENST00000630424 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
UBE3A-220ENST00000630424 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
UBE3A-220ENST00000630424 TRIM29Q14134 588 aa17.34■□□□□ 0.37
UBE3A-220ENST00000630424 MYOM3Q5VTT5 1437 aa17.33■□□□□ 0.37
UBE3A-220ENST00000630424 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
UBE3A-220ENST00000630424 GNAI1P63096 354 aa17.32■□□□□ 0.36
UBE3A-220ENST00000630424 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.362e-7■■■■□ 21.4
UBE3A-220ENST00000630424 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
UBE3A-220ENST00000630424 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
UBE3A-220ENST00000630424 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
UBE3A-220ENST00000630424 NUTM2AQ8IVF1 878 aaPredicted RBP17.32■□□□□ 0.36
UBE3A-220ENST00000630424 DZIP1LQ8IYY4 767 aaKnown RBP17.31■□□□□ 0.36
UBE3A-220ENST00000630424 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
UBE3A-220ENST00000630424 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
UBE3A-220ENST00000630424 SF3B2Q13435 895 aaKnown RBP17.3■□□□□ 0.36
UBE3A-220ENST00000630424 TSR1Q2NL82 804 aaKnown RBP17.3■□□□□ 0.36
UBE3A-220ENST00000630424 NFXL1Q6ZNB6 911 aa17.3■□□□□ 0.36
UBE3A-220ENST00000630424 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
UBE3A-220ENST00000630424 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
UBE3A-220ENST00000630424 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
UBE3A-220ENST00000630424 IGF1RP08069 1367 aa17.3■□□□□ 0.36
UBE3A-220ENST00000630424 REC8O95072 547 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 CCDC43Q96MW1 224 aaKnown RBP17.29■□□□□ 0.36
UBE3A-220ENST00000630424 GOLGA6L3A6NEY3 463 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 FYB1O15117 783 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 PHF14O94880 888 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 DEKP35659 375 aaKnown RBP17.29■□□□□ 0.36
UBE3A-220ENST00000630424 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 ANO2Q9NQ90 1003 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
UBE3A-220ENST00000630424 ERICH2A1L162 156 aa17.28■□□□□ 0.36
UBE3A-220ENST00000630424 BECN2A8MW95 431 aa17.28■□□□□ 0.36
UBE3A-220ENST00000630424 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
UBE3A-220ENST00000630424 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
UBE3A-220ENST00000630424 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
UBE3A-220ENST00000630424 ARID3AQ99856 593 aa17.28■□□□□ 0.36
UBE3A-220ENST00000630424 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
UBE3A-220ENST00000630424 MIA2Q96PC5 1412 aa17.27■□□□□ 0.36
UBE3A-220ENST00000630424 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
UBE3A-220ENST00000630424 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
UBE3A-220ENST00000630424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
UBE3A-220ENST00000630424 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
UBE3A-220ENST00000630424 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
UBE3A-220ENST00000630424 GOLGA6L19H0YKK7 550 aa17.25■□□□□ 0.35
UBE3A-220ENST00000630424 TPM2P07951 284 aa17.25■□□□□ 0.35
UBE3A-220ENST00000630424 MTMR7Q9Y216 660 aa17.25■□□□□ 0.35
UBE3A-220ENST00000630424 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
UBE3A-220ENST00000630424 RALYLQ86SE5 291 aaKnown RBP17.24■□□□□ 0.35
UBE3A-220ENST00000630424 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
UBE3A-220ENST00000630424 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
UBE3A-220ENST00000630424 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms