RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
SHPRH-211ENST00000629427 CCAR2Q8N163 923 aaKnown RBP14.44□□□□□ -0.1
SHPRH-211ENST00000629427 VGFO15240 615 aaPredicted RBP14.43□□□□□ -0.1
SHPRH-211ENST00000629427 TPM1P09493 284 aa14.43□□□□□ -0.1
SHPRH-211ENST00000629427 PCMTD1Q96MG8 357 aaPredicted RBP14.43□□□□□ -0.1
SHPRH-211ENST00000629427 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
SHPRH-211ENST00000629427 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
SHPRH-211ENST00000629427 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
SHPRH-211ENST00000629427 CPLX2Q6PUV4 134 aaKnown RBP14.42□□□□□ -0.1
SHPRH-211ENST00000629427 ST20-MTHFSA0A0A6YYL1 179 aa14.41□□□□□ -0.1
SHPRH-211ENST00000629427 BECN2A8MW95 431 aa14.41□□□□□ -0.1
SHPRH-211ENST00000629427 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
SHPRH-211ENST00000629427 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
SHPRH-211ENST00000629427 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
SHPRH-211ENST00000629427 RUFY2Q8WXA3 655 aa14.4□□□□□ -0.1
SHPRH-211ENST00000629427 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.1
SHPRH-211ENST00000629427 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
SHPRH-211ENST00000629427 ATP6V1DQ9Y5K8 247 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 PLIN1O60240 522 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 TRDNQ13061 729 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 ANO2Q9NQ90 1003 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
SHPRH-211ENST00000629427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
SHPRH-211ENST00000629427 ERICH2A1L162 156 aa14.38□□□□□ -0.11
SHPRH-211ENST00000629427 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
SHPRH-211ENST00000629427 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
SHPRH-211ENST00000629427 ATF3P18847 181 aa14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CCDC47Q96A33 483 aaKnown RBP14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CPLX1O14810 134 aa14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
SHPRH-211ENST00000629427 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
SHPRH-211ENST00000629427 E9PSI1 815 aa14.36□□□□□ -0.11
SHPRH-211ENST00000629427 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
SHPRH-211ENST00000629427 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
SHPRH-211ENST00000629427 FYB1O15117 783 aa14.34□□□□□ -0.11
SHPRH-211ENST00000629427 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
SHPRH-211ENST00000629427 RIPK4P57078 832 aa14.34□□□□□ -0.11
SHPRH-211ENST00000629427 HOOK1Q9UJC3 728 aaKnown RBP14.34□□□□□ -0.11
SHPRH-211ENST00000629427 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
SHPRH-211ENST00000629427 FKBP5Q13451 457 aaPredicted RBP14.33□□□□□ -0.11
SHPRH-211ENST00000629427 ANKRD20A12PQ8NF67 263 aa14.33□□□□□ -0.11
SHPRH-211ENST00000629427 FOSBP53539 338 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 CCDC27Q2M243 656 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 IPO7O95373 1038 aaKnown RBP14.32□□□□□ -0.12
SHPRH-211ENST00000629427 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 REC8O95072 547 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 RNF20Q5VTR2 975 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 AIMP1Q12904 312 aaKnown RBP14.31□□□□□ -0.12
SHPRH-211ENST00000629427 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
SHPRH-211ENST00000629427 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 APAF1O14727 1248 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
SHPRH-211ENST00000629427 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 NUTM2GQ5VZR2 741 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 BICD2Q8TD16 824 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 HMOX1P09601 288 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
SHPRH-211ENST00000629427 DDX19BQ9UMR2 479 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 USP47Q96K76 1375 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 PTPRGP23470 1445 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
SHPRH-211ENST00000629427 FAM69CQ0P6D2 419 aa14.28□□□□□ -0.12
SHPRH-211ENST00000629427 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHPRH-211ENST00000629427 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.12
SHPRH-211ENST00000629427 ODF2Q5BJF6 829 aa14.27□□□□□ -0.12
SHPRH-211ENST00000629427 GPS2Q13227 327 aa14.27□□□□□ -0.12
SHPRH-211ENST00000629427 OSCARQ8IYS5 282 aa14.27□□□□□ -0.12
SHPRH-211ENST00000629427 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.12
SHPRH-211ENST00000629427 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.12
SHPRH-211ENST00000629427 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHPRH-211ENST00000629427 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
SHPRH-211ENST00000629427 CT47A1Q5JQC4 288 aaPredicted RBP14.26□□□□□ -0.13
SHPRH-211ENST00000629427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.26□□□□□ -0.133e-9■■■■■ 73.7
SHPRH-211ENST00000629427 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
SHPRH-211ENST00000629427 EPS15P42566 896 aa14.26□□□□□ -0.13
SHPRH-211ENST00000629427 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
SHPRH-211ENST00000629427 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
SHPRH-211ENST00000629427 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
SHPRH-211ENST00000629427 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
SHPRH-211ENST00000629427 API5Q9BZZ5 524 aaKnown RBP14.25□□□□□ -0.13
SHPRH-211ENST00000629427 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 DZIP1LQ8IYY4 767 aaKnown RBP14.25□□□□□ -0.13
SHPRH-211ENST00000629427 FAM177BA6PVY3 158 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 ERC2O15083 957 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 PDE4AP27815 886 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
SHPRH-211ENST00000629427 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms