RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
PKP4-218ENST00000629219 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
PKP4-218ENST00000629219 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
PKP4-218ENST00000629219 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
PKP4-218ENST00000629219 ITGAEP38570 1179 aa13.74□□□□□ -0.21
PKP4-218ENST00000629219 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
PKP4-218ENST00000629219 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
PKP4-218ENST00000629219 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
PKP4-218ENST00000629219 DIP2AQ14689 1571 aa13.72□□□□□ -0.21
PKP4-218ENST00000629219 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
PKP4-218ENST00000629219 TRPM2O94759 1503 aa13.72□□□□□ -0.21
PKP4-218ENST00000629219 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
PKP4-218ENST00000629219 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.21
PKP4-218ENST00000629219 NKTRP30414 1462 aaKnown RBP13.7□□□□□ -0.22
PKP4-218ENST00000629219 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.7□□□□□ -0.22
PKP4-218ENST00000629219 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
PKP4-218ENST00000629219 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
PKP4-218ENST00000629219 CHD2O14647 1828 aaKnown RBP13.68□□□□□ -0.22
PKP4-218ENST00000629219 XIRP1Q702N8 1843 aaKnown RBP13.68□□□□□ -0.22
PKP4-218ENST00000629219 PIK3R4Q99570 1358 aa13.67□□□□□ -0.22
PKP4-218ENST00000629219 KIF1BO60333 1816 aa13.67□□□□□ -0.22
PKP4-218ENST00000629219 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
PKP4-218ENST00000629219 KCNA6P17658 529 aa13.65□□□□□ -0.22
PKP4-218ENST00000629219 SETBP1Q9Y6X0 1596 aa13.65□□□□□ -0.22
PKP4-218ENST00000629219 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
PKP4-218ENST00000629219 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
PKP4-218ENST00000629219 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
PKP4-218ENST00000629219 NRXN3Q9Y4C0 1643 aa13.61□□□□□ -0.23
PKP4-218ENST00000629219 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
PKP4-218ENST00000629219 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
PKP4-218ENST00000629219 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
PKP4-218ENST00000629219 SLC26A8Q96RN1 970 aa13.59□□□□□ -0.23
PKP4-218ENST00000629219 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
PKP4-218ENST00000629219 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
PKP4-218ENST00000629219 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
PKP4-218ENST00000629219 CHGAP10645 457 aaKnown RBP13.58□□□□□ -0.24
PKP4-218ENST00000629219 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
PKP4-218ENST00000629219 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
PKP4-218ENST00000629219 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
PKP4-218ENST00000629219 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
PKP4-218ENST00000629219 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
PKP4-218ENST00000629219 PRAG1Q86YV5 1406 aa13.56□□□□□ -0.24
PKP4-218ENST00000629219 PPLO60437 1756 aa13.56□□□□□ -0.24
PKP4-218ENST00000629219 SETD1AO15047 1707 aaKnown RBP13.54□□□□□ -0.24
PKP4-218ENST00000629219 HRCP23327 699 aa13.54□□□□□ -0.24
PKP4-218ENST00000629219 BCANQ96GW7 911 aa13.54□□□□□ -0.24
PKP4-218ENST00000629219 MSH6P52701 1360 aa13.54□□□□□ -0.24
PKP4-218ENST00000629219 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
PKP4-218ENST00000629219 IFT172Q9UG01 1749 aa13.53□□□□□ -0.24
PKP4-218ENST00000629219 PROSER2Q86WR7 435 aaPredicted RBP13.53□□□□□ -0.24
PKP4-218ENST00000629219 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
PKP4-218ENST00000629219 DCCP43146 1447 aa13.53□□□□□ -0.24
PKP4-218ENST00000629219 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
PKP4-218ENST00000629219 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
PKP4-218ENST00000629219 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
PKP4-218ENST00000629219 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
PKP4-218ENST00000629219 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.5□□□□□ -0.25
PKP4-218ENST00000629219 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
PKP4-218ENST00000629219 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
PKP4-218ENST00000629219 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
PKP4-218ENST00000629219 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
PKP4-218ENST00000629219 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
PKP4-218ENST00000629219 C19orf44Q9H6X5 657 aa13.47□□□□□ -0.25
PKP4-218ENST00000629219 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
PKP4-218ENST00000629219 METP08581 1390 aa13.46□□□□□ -0.25
PKP4-218ENST00000629219 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
PKP4-218ENST00000629219 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
PKP4-218ENST00000629219 MYOM2P54296 1465 aa13.44□□□□□ -0.26
PKP4-218ENST00000629219 NRXN1Q9ULB1 1477 aa13.44□□□□□ -0.26
PKP4-218ENST00000629219 LAMC1P11047 1609 aa13.44□□□□□ -0.26
PKP4-218ENST00000629219 AHDC1Q5TGY3 1603 aaPredicted RBP13.44□□□□□ -0.26
PKP4-218ENST00000629219 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
PKP4-218ENST00000629219 ADGRL3Q9HAR2 1447 aa13.44□□□□□ -0.26
PKP4-218ENST00000629219 TECPR2O15040 1411 aa13.43□□□□□ -0.26
PKP4-218ENST00000629219 PIK3C2GO75747 1445 aa13.43□□□□□ -0.26
PKP4-218ENST00000629219 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
PKP4-218ENST00000629219 FOXD1Q16676 465 aa13.42□□□□□ -0.26
PKP4-218ENST00000629219 PHLPP1O60346 1717 aa13.42□□□□□ -0.26
PKP4-218ENST00000629219 ATF3P18847 181 aa13.41□□□□□ -0.26
PKP4-218ENST00000629219 COL16A1Q07092 1604 aaPredicted RBP13.41□□□□□ -0.26
PKP4-218ENST00000629219 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
PKP4-218ENST00000629219 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
PKP4-218ENST00000629219 MST1RQ04912 1400 aa13.39□□□□□ -0.27
PKP4-218ENST00000629219 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
PKP4-218ENST00000629219 JCADQ9P266 1359 aa13.38□□□□□ -0.27
PKP4-218ENST00000629219 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
PKP4-218ENST00000629219 LRP6O75581 1613 aa13.38□□□□□ -0.27
PKP4-218ENST00000629219 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
PKP4-218ENST00000629219 ADGRF5Q8IZF2 1346 aa13.38□□□□□ -0.27
PKP4-218ENST00000629219 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
PKP4-218ENST00000629219 LRPPRCP42704 1394 aaKnown RBP13.37□□□□□ -0.27
PKP4-218ENST00000629219 ABCC11Q96J66 1382 aa13.37□□□□□ -0.27
PKP4-218ENST00000629219 ROBO2Q9HCK4 1378 aa13.37□□□□□ -0.27
PKP4-218ENST00000629219 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
PKP4-218ENST00000629219 SRCAPQ6ZRS2 3230 aa13.35□□□□□ -0.27
PKP4-218ENST00000629219 SIRT1Q96EB6 747 aa13.35□□□□□ -0.27
PKP4-218ENST00000629219 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
PKP4-218ENST00000629219 C14orf93Q9H972 538 aaKnown RBP13.34□□□□□ -0.27
PKP4-218ENST00000629219 YTHDC2Q9H6S0 1430 aaKnown RBP13.33□□□□□ -0.28
PKP4-218ENST00000629219 BRINP3Q76B58 766 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms