RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 NWD1Q149M9 1564 aa25.55■■□□□ 1.68
PDCD6-214ENST00000628729 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
PDCD6-214ENST00000628729 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
PDCD6-214ENST00000628729 ITGAEP38570 1179 aa25.48■■□□□ 1.67
PDCD6-214ENST00000628729 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
PDCD6-214ENST00000628729 NKTRP30414 1462 aaKnown RBP25.45■■□□□ 1.66
PDCD6-214ENST00000628729 TMEM94Q12767 1356 aa25.44■■□□□ 1.66
PDCD6-214ENST00000628729 RRBP1Q9P2E9 1410 aaKnown RBP25.44■■□□□ 1.66
PDCD6-214ENST00000628729 PLEKHG1Q9ULL1 1385 aa25.44■■□□□ 1.66
PDCD6-214ENST00000628729 CHD2O14647 1828 aaKnown RBP25.43■■□□□ 1.66
PDCD6-214ENST00000628729 NUP155O75694 1391 aa25.43■■□□□ 1.66
PDCD6-214ENST00000628729 KCNA6P17658 529 aa25.42■■□□□ 1.66
PDCD6-214ENST00000628729 SPHKAPQ2M3C7 1700 aa25.42■■□□□ 1.66
PDCD6-214ENST00000628729 SOCS7O14512 581 aa25.41■■□□□ 1.66
PDCD6-214ENST00000628729 RBM33Q96EV2 1170 aaKnown RBP25.39■■□□□ 1.66
PDCD6-214ENST00000628729 ROBO1Q9Y6N7 1651 aa25.37■■□□□ 1.65
PDCD6-214ENST00000628729 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
PDCD6-214ENST00000628729 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
PDCD6-214ENST00000628729 NRXN3Q9Y4C0 1643 aa25.34■■□□□ 1.65
PDCD6-214ENST00000628729 CHGAP10645 457 aaKnown RBP25.33■■□□□ 1.65
PDCD6-214ENST00000628729 NAIPQ13075 1403 aa25.33■■□□□ 1.65
PDCD6-214ENST00000628729 FAM135BQ49AJ0 1406 aa25.32■■□□□ 1.64
PDCD6-214ENST00000628729 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
PDCD6-214ENST00000628729 NUTM2DQ5VT03 806 aaPredicted RBP25.32■■□□□ 1.64
PDCD6-214ENST00000628729 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
PDCD6-214ENST00000628729 CLTCL1P53675 1640 aa25.32■■□□□ 1.64
PDCD6-214ENST00000628729 BCANQ96GW7 911 aa25.31■■□□□ 1.64
PDCD6-214ENST00000628729 TRPM2O94759 1503 aa25.27■■□□□ 1.64
PDCD6-214ENST00000628729 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.26■■□□□ 1.63
PDCD6-214ENST00000628729 TBX22Q9Y458 520 aa25.26■■□□□ 1.63
PDCD6-214ENST00000628729 SETBP1Q9Y6X0 1596 aa25.25■■□□□ 1.63
PDCD6-214ENST00000628729 XRN1Q8IZH2 1706 aaKnown RBP25.24■■□□□ 1.63
PDCD6-214ENST00000628729 PTPRUQ92729 1446 aa25.24■■□□□ 1.63
PDCD6-214ENST00000628729 MSH6P52701 1360 aa25.24■■□□□ 1.63
PDCD6-214ENST00000628729 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
PDCD6-214ENST00000628729 HDGFP51858 240 aaKnown RBP25.23■■□□□ 1.63
PDCD6-214ENST00000628729 HFM1A2PYH4 1435 aa25.22■■□□□ 1.63
PDCD6-214ENST00000628729 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.22■■□□□ 1.63
PDCD6-214ENST00000628729 PIK3R4Q99570 1358 aa25.2■■□□□ 1.63
PDCD6-214ENST00000628729 PHLPP1O60346 1717 aa25.19■■□□□ 1.62
PDCD6-214ENST00000628729 NCOA3Q9Y6Q9 1424 aa25.18■■□□□ 1.62
PDCD6-214ENST00000628729 KIF1BO60333 1816 aa25.16■■□□□ 1.62
PDCD6-214ENST00000628729 COL16A1Q07092 1604 aaPredicted RBP25.16■■□□□ 1.62
PDCD6-214ENST00000628729 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
PDCD6-214ENST00000628729 SETD1AO15047 1707 aaKnown RBP25.13■■□□□ 1.61
PDCD6-214ENST00000628729 RGS17Q9UGC6 210 aaPredicted RBP25.13■■□□□ 1.61
PDCD6-214ENST00000628729 METP08581 1390 aa25.11■■□□□ 1.61
PDCD6-214ENST00000628729 AMOTL2Q9Y2J4 779 aa25.1■■□□□ 1.61
PDCD6-214ENST00000628729 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
PDCD6-214ENST00000628729 AHDC1Q5TGY3 1603 aaPredicted RBP25.08■■□□□ 1.61
PDCD6-214ENST00000628729 NALCNQ8IZF0 1738 aa25.08■■□□□ 1.61
PDCD6-214ENST00000628729 C14orf37Q86TY3 774 aa25.05■■□□□ 1.6
PDCD6-214ENST00000628729 PPLO60437 1756 aa25.05■■□□□ 1.6
PDCD6-214ENST00000628729 DCCP43146 1447 aa25.04■■□□□ 1.6
PDCD6-214ENST00000628729 C19orf44Q9H6X5 657 aa25.04■■□□□ 1.6
PDCD6-214ENST00000628729 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
PDCD6-214ENST00000628729 LRP6O75581 1613 aa25.01■■□□□ 1.59
PDCD6-214ENST00000628729 CADPS2Q86UW7 1296 aa25.01■■□□□ 1.59
PDCD6-214ENST00000628729 JCADQ9P266 1359 aa25.01■■□□□ 1.59
PDCD6-214ENST00000628729 SHPRHQ149N8 1683 aa25.01■■□□□ 1.59
PDCD6-214ENST00000628729 SLC4A1APQ9BWU0 796 aaKnown RBP25■■□□□ 1.59
PDCD6-214ENST00000628729 MST1RQ04912 1400 aa25■■□□□ 1.59
PDCD6-214ENST00000628729 ASXL1Q8IXJ9 1541 aa25■■□□□ 1.59
PDCD6-214ENST00000628729 ADGRL3Q9HAR2 1447 aa24.99■■□□□ 1.59
PDCD6-214ENST00000628729 NHSL1Q5SYE7 1610 aa24.98■■□□□ 1.59
PDCD6-214ENST00000628729 ATF3P18847 181 aa24.98■■□□□ 1.59
PDCD6-214ENST00000628729 FOXD1Q16676 465 aa24.97■■□□□ 1.59
PDCD6-214ENST00000628729 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
PDCD6-214ENST00000628729 POTEAQ6S8J7 498 aa24.96■■□□□ 1.59
PDCD6-214ENST00000628729 BRINP3Q76B58 766 aa24.96■■□□□ 1.59
PDCD6-214ENST00000628729 PTCH1Q13635 1447 aa24.95■■□□□ 1.58
PDCD6-214ENST00000628729 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
PDCD6-214ENST00000628729 ROBO2Q9HCK4 1378 aa24.92■■□□□ 1.58
PDCD6-214ENST00000628729 SPATA31E1Q6ZUB1 1445 aa24.9■■□□□ 1.58
PDCD6-214ENST00000628729 VGFO15240 615 aaPredicted RBP24.88■■□□□ 1.57
PDCD6-214ENST00000628729 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
PDCD6-214ENST00000628729 CCDC144AA2RUR9 1427 aa24.87■■□□□ 1.57
PDCD6-214ENST00000628729 LAMC1P11047 1609 aa24.86■■□□□ 1.57
PDCD6-214ENST00000628729 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
PDCD6-214ENST00000628729 SETD5Q9C0A6 1442 aa24.85■■□□□ 1.57
PDCD6-214ENST00000628729 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.57
PDCD6-214ENST00000628729 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
PDCD6-214ENST00000628729 ADGRF5Q8IZF2 1346 aa24.83■■□□□ 1.56
PDCD6-214ENST00000628729 DDX17Q92841 729 aaKnown RBP24.82■■□□□ 1.56
PDCD6-214ENST00000628729 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
PDCD6-214ENST00000628729 CDC42BPGQ6DT37 1551 aa24.79■■□□□ 1.56
PDCD6-214ENST00000628729 PIK3C2GO75747 1445 aa24.78■■□□□ 1.56
PDCD6-214ENST00000628729 RGL3Q3MIN7 710 aa24.76■■□□□ 1.55
PDCD6-214ENST00000628729 PNPLA6Q8IY17 1366 aa24.76■■□□□ 1.55
PDCD6-214ENST00000628729 TECPR2O15040 1411 aa24.76■■□□□ 1.55
PDCD6-214ENST00000628729 ANKRD30BQ9BXX2 1392 aa24.74■■□□□ 1.55
PDCD6-214ENST00000628729 MEX3CQ5U5Q3 659 aaKnown RBP24.72■■□□□ 1.55
PDCD6-214ENST00000628729 ORAI2Q96SN7 254 aa24.72■■□□□ 1.55
PDCD6-214ENST00000628729 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
PDCD6-214ENST00000628729 NUTM2BA6NNL0 878 aaPredicted RBP24.71■■□□□ 1.55
PDCD6-214ENST00000628729 NUTM2EB1AL46 878 aaPredicted RBP24.71■■□□□ 1.55
PDCD6-214ENST00000628729 NUTM2AQ8IVF1 878 aaPredicted RBP24.71■■□□□ 1.55
PDCD6-214ENST00000628729 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.55
PDCD6-214ENST00000628729 LRPPRCP42704 1394 aaKnown RBP24.7■■□□□ 1.55
PDCD6-214ENST00000628729 PLEKHH1Q9ULM0 1364 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms