RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 DNMT1P26358 1616 aaKnown RBP12.13□□□□□ -0.47
TCF4-260ENST00000627685 LHX8Q68G74 356 aa12.13□□□□□ -0.47
TCF4-260ENST00000627685 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
TCF4-260ENST00000627685 ARID4BQ4LE39 1312 aaPredicted RBP12.12□□□□□ -0.47
TCF4-260ENST00000627685 ABCC5O15440 1437 aa12.12□□□□□ -0.47
TCF4-260ENST00000627685 RNF17Q9BXT8 1623 aaKnown RBP12.12□□□□□ -0.47
TCF4-260ENST00000627685 GOLGA2Q08379 1002 aa12.11□□□□□ -0.47
TCF4-260ENST00000627685 SEC24BO95487 1268 aa12.1□□□□□ -0.47
TCF4-260ENST00000627685 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
TCF4-260ENST00000627685 RGL2O15211 777 aa12.09□□□□□ -0.47
TCF4-260ENST00000627685 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
TCF4-260ENST00000627685 MLECQ14165 292 aa12.09□□□□□ -0.47
TCF4-260ENST00000627685 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
TCF4-260ENST00000627685 PREX1Q8TCU6 1659 aa12.09□□□□□ -0.47
TCF4-260ENST00000627685 EIF2AK4Q9P2K8 1649 aaKnown RBP12.08□□□□□ -0.48
TCF4-260ENST00000627685 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
TCF4-260ENST00000627685 IER5LQ5T953 404 aa12.08□□□□□ -0.48
TCF4-260ENST00000627685 DAPK1P53355 1430 aa12.08□□□□□ -0.48
TCF4-260ENST00000627685 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
TCF4-260ENST00000627685 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
TCF4-260ENST00000627685 CNTLNQ9NXG0 1405 aa12.07□□□□□ -0.48
TCF4-260ENST00000627685 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
TCF4-260ENST00000627685 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
TCF4-260ENST00000627685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
TCF4-260ENST00000627685 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
TCF4-260ENST00000627685 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
TCF4-260ENST00000627685 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
TCF4-260ENST00000627685 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
TCF4-260ENST00000627685 DEPDC5O75140 1603 aa12.06□□□□□ -0.48
TCF4-260ENST00000627685 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
TCF4-260ENST00000627685 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
TCF4-260ENST00000627685 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
TCF4-260ENST00000627685 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
TCF4-260ENST00000627685 ZNF142P52746 1687 aaPredicted RBP12.05□□□□□ -0.48
TCF4-260ENST00000627685 ABCC3O15438 1527 aa12.05□□□□□ -0.48
TCF4-260ENST00000627685 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
TCF4-260ENST00000627685 NPATQ14207 1427 aa12.04□□□□□ -0.48
TCF4-260ENST00000627685 VWDEQ8N2E2 1590 aa12.04□□□□□ -0.48
TCF4-260ENST00000627685 STRCQ7RTU9 1775 aa12.02□□□□□ -0.48
TCF4-260ENST00000627685 DUOX2Q9NRD8 1548 aa12.02□□□□□ -0.48
TCF4-260ENST00000627685 PLCG2P16885 1265 aa12.02□□□□□ -0.49
TCF4-260ENST00000627685 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
TCF4-260ENST00000627685 ZMYM3Q14202 1370 aa12.02□□□□□ -0.49
TCF4-260ENST00000627685 PZPP20742 1482 aa12.02□□□□□ -0.49
TCF4-260ENST00000627685 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
TCF4-260ENST00000627685 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
TCF4-260ENST00000627685 HSPA2P54652 639 aa12□□□□□ -0.49
TCF4-260ENST00000627685 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
TCF4-260ENST00000627685 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
TCF4-260ENST00000627685 KIF15Q9NS87 1388 aa12□□□□□ -0.49
TCF4-260ENST00000627685 ERBINQ96RT1 1412 aa12□□□□□ -0.49
TCF4-260ENST00000627685 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
TCF4-260ENST00000627685 CEP170BQ9Y4F5 1589 aaPredicted RBP11.99□□□□□ -0.49
TCF4-260ENST00000627685 UHRF1BP1Q6BDS2 1440 aa11.98□□□□□ -0.49
TCF4-260ENST00000627685 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
TCF4-260ENST00000627685 CEP152O94986 1710 aa11.97□□□□□ -0.49
TCF4-260ENST00000627685 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
TCF4-260ENST00000627685 LMTK2Q8IWU2 1503 aa11.97□□□□□ -0.49
TCF4-260ENST00000627685 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
TCF4-260ENST00000627685 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
TCF4-260ENST00000627685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
TCF4-260ENST00000627685 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
TCF4-260ENST00000627685 RRBP1Q9P2E9 1410 aaKnown RBP11.96□□□□□ -0.49
TCF4-260ENST00000627685 STK25O00506 426 aa11.96□□□□□ -0.49
TCF4-260ENST00000627685 KIF3BO15066 747 aa11.95□□□□□ -0.5
TCF4-260ENST00000627685 UNC13BO14795 1591 aa11.95□□□□□ -0.5
TCF4-260ENST00000627685 NEURL4Q96JN8 1562 aa11.95□□□□□ -0.5
TCF4-260ENST00000627685 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
TCF4-260ENST00000627685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCF4-260ENST00000627685 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
TCF4-260ENST00000627685 GGT6Q6P531 493 aa11.94□□□□□ -0.5
TCF4-260ENST00000627685 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
TCF4-260ENST00000627685 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
TCF4-260ENST00000627685 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
TCF4-260ENST00000627685 A2ML1A8K2U0 1454 aa11.92□□□□□ -0.5
TCF4-260ENST00000627685 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
TCF4-260ENST00000627685 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
TCF4-260ENST00000627685 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
TCF4-260ENST00000627685 SYNMO15061 1565 aa11.92□□□□□ -0.5
TCF4-260ENST00000627685 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
TCF4-260ENST00000627685 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
TCF4-260ENST00000627685 LTBP4Q8N2S1 1624 aa11.9□□□□□ -0.5
TCF4-260ENST00000627685 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
TCF4-260ENST00000627685 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
TCF4-260ENST00000627685 ANKRD30AQ9BXX3 1397 aa11.9□□□□□ -0.5
TCF4-260ENST00000627685 PTPRTO14522 1441 aa11.89□□□□□ -0.51
TCF4-260ENST00000627685 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
TCF4-260ENST00000627685 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
TCF4-260ENST00000627685 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
TCF4-260ENST00000627685 TNRQ92752 1358 aa11.89□□□□□ -0.51
TCF4-260ENST00000627685 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
TCF4-260ENST00000627685 PPARGC1BQ86YN6 1023 aaKnown RBP11.88□□□□□ -0.51
TCF4-260ENST00000627685 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
TCF4-260ENST00000627685 NOS1P29475 1434 aa11.87□□□□□ -0.51
TCF4-260ENST00000627685 SOX12O15370 315 aa11.87□□□□□ -0.51
TCF4-260ENST00000627685 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
TCF4-260ENST00000627685 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
TCF4-260ENST00000627685 IQGAP3Q86VI3 1631 aa11.86□□□□□ -0.51
TCF4-260ENST00000627685 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
TCF4-260ENST00000627685 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms