RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 ZFYVE9O95405 1425 aa14.45□□□□□ -0.1
CHD2-210ENST00000627200 SLC52A1Q9NWF4 448 aa14.45□□□□□ -0.1
CHD2-210ENST00000627200 NWD1Q149M9 1564 aa14.43□□□□□ -0.1
CHD2-210ENST00000627200 RIMS2Q9UQ26 1411 aa14.43□□□□□ -0.1
CHD2-210ENST00000627200 RBM33Q96EV2 1170 aaKnown RBP14.43□□□□□ -0.1
CHD2-210ENST00000627200 NUP155O75694 1391 aa14.42□□□□□ -0.1
CHD2-210ENST00000627200 TMEM94Q12767 1356 aa14.42□□□□□ -0.1
CHD2-210ENST00000627200 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
CHD2-210ENST00000627200 BCANQ96GW7 911 aa14.4□□□□□ -0.1
CHD2-210ENST00000627200 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
CHD2-210ENST00000627200 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
CHD2-210ENST00000627200 PLEKHG1Q9ULL1 1385 aa14.39□□□□□ -0.11
CHD2-210ENST00000627200 KCNA6P17658 529 aa14.39□□□□□ -0.11
CHD2-210ENST00000627200 NUTM2DQ5VT03 806 aaPredicted RBP14.39□□□□□ -0.11
CHD2-210ENST00000627200 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
CHD2-210ENST00000627200 SOCS7O14512 581 aa14.37□□□□□ -0.11
CHD2-210ENST00000627200 SPHKAPQ2M3C7 1700 aa14.37□□□□□ -0.11
CHD2-210ENST00000627200 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
CHD2-210ENST00000627200 CHD2O14647 1828 aaKnown RBP14.36□□□□□ -0.11
CHD2-210ENST00000627200 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
CHD2-210ENST00000627200 ROBO1Q9Y6N7 1651 aa14.35□□□□□ -0.11
CHD2-210ENST00000627200 NAIPQ13075 1403 aa14.34□□□□□ -0.11
CHD2-210ENST00000627200 CLTCL1P53675 1640 aa14.33□□□□□ -0.12
CHD2-210ENST00000627200 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
CHD2-210ENST00000627200 NRXN3Q9Y4C0 1643 aa14.32□□□□□ -0.12
CHD2-210ENST00000627200 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
CHD2-210ENST00000627200 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD2-210ENST00000627200 MSH6P52701 1360 aa14.3□□□□□ -0.12
CHD2-210ENST00000627200 TRPM2O94759 1503 aa14.3□□□□□ -0.12
CHD2-210ENST00000627200 HDGFP51858 240 aaKnown RBP14.29□□□□□ -0.12
CHD2-210ENST00000627200 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
CHD2-210ENST00000627200 PTPRUQ92729 1446 aa14.29□□□□□ -0.12
CHD2-210ENST00000627200 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
CHD2-210ENST00000627200 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
CHD2-210ENST00000627200 SETBP1Q9Y6X0 1596 aa14.27□□□□□ -0.12
CHD2-210ENST00000627200 NEXMIFQ5QGS0 1516 aa14.27□□□□□ -0.12
CHD2-210ENST00000627200 XRN1Q8IZH2 1706 aaKnown RBP14.27□□□□□ -0.13
CHD2-210ENST00000627200 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
CHD2-210ENST00000627200 PHLPP1O60346 1717 aa14.25□□□□□ -0.13
CHD2-210ENST00000627200 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
CHD2-210ENST00000627200 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
CHD2-210ENST00000627200 C14orf37Q86TY3 774 aa14.24□□□□□ -0.13
CHD2-210ENST00000627200 SLAIN2Q9P270 581 aa14.24□□□□□ -0.13
CHD2-210ENST00000627200 METP08581 1390 aa14.23□□□□□ -0.13
CHD2-210ENST00000627200 KIF1BO60333 1816 aa14.23□□□□□ -0.13
CHD2-210ENST00000627200 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
CHD2-210ENST00000627200 AMOTL2Q9Y2J4 779 aa14.23□□□□□ -0.13
CHD2-210ENST00000627200 COL16A1Q07092 1604 aaPredicted RBP14.23□□□□□ -0.13
CHD2-210ENST00000627200 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
CHD2-210ENST00000627200 NCOA3Q9Y6Q9 1424 aa14.22□□□□□ -0.13
CHD2-210ENST00000627200 SETD1AO15047 1707 aaKnown RBP14.19□□□□□ -0.14
CHD2-210ENST00000627200 FOXD1Q16676 465 aa14.19□□□□□ -0.14
CHD2-210ENST00000627200 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
CHD2-210ENST00000627200 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
CHD2-210ENST00000627200 NALCNQ8IZF0 1738 aa14.18□□□□□ -0.14
CHD2-210ENST00000627200 AHDC1Q5TGY3 1603 aaPredicted RBP14.17□□□□□ -0.14
CHD2-210ENST00000627200 ATF3P18847 181 aa14.17□□□□□ -0.14
CHD2-210ENST00000627200 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
CHD2-210ENST00000627200 PPLO60437 1756 aa14.17□□□□□ -0.14
CHD2-210ENST00000627200 LRP6O75581 1613 aa14.15□□□□□ -0.14
CHD2-210ENST00000627200 JCADQ9P266 1359 aa14.15□□□□□ -0.14
CHD2-210ENST00000627200 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
CHD2-210ENST00000627200 DCCP43146 1447 aa14.15□□□□□ -0.14
CHD2-210ENST00000627200 MST1RQ04912 1400 aa14.15□□□□□ -0.14
CHD2-210ENST00000627200 BRINP3Q76B58 766 aa14.14□□□□□ -0.15
CHD2-210ENST00000627200 ADGRL3Q9HAR2 1447 aa14.14□□□□□ -0.15
CHD2-210ENST00000627200 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
CHD2-210ENST00000627200 SHPRHQ149N8 1683 aa14.12□□□□□ -0.15
CHD2-210ENST00000627200 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
CHD2-210ENST00000627200 ROBO2Q9HCK4 1378 aa14.11□□□□□ -0.15
CHD2-210ENST00000627200 PTCH1Q13635 1447 aa14.11□□□□□ -0.15
CHD2-210ENST00000627200 CCDC144AA2RUR9 1427 aa14.1□□□□□ -0.15
CHD2-210ENST00000627200 IFT172Q9UG01 1749 aa14.1□□□□□ -0.15
CHD2-210ENST00000627200 SPATA31E1Q6ZUB1 1445 aa14.09□□□□□ -0.15
CHD2-210ENST00000627200 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
CHD2-210ENST00000627200 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
CHD2-210ENST00000627200 MPHOSPH9Q99550 1183 aa14.09□□□□□ -0.15
CHD2-210ENST00000627200 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.16
CHD2-210ENST00000627200 ADGRF5Q8IZF2 1346 aa14.08□□□□□ -0.16
CHD2-210ENST00000627200 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
CHD2-210ENST00000627200 SPATA31A6Q5VVP1 1343 aa14.07□□□□□ -0.16
CHD2-210ENST00000627200 C1orf167Q5SNV9 1468 aa14.06□□□□□ -0.16
CHD2-210ENST00000627200 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
CHD2-210ENST00000627200 SETD5Q9C0A6 1442 aa14.05□□□□□ -0.16
CHD2-210ENST00000627200 NUTM2BA6NNL0 878 aaPredicted RBP14.04□□□□□ -0.16
CHD2-210ENST00000627200 NUTM2EB1AL46 878 aaPredicted RBP14.04□□□□□ -0.16
CHD2-210ENST00000627200 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
CHD2-210ENST00000627200 NUTM2AQ8IVF1 878 aaPredicted RBP14.04□□□□□ -0.16
CHD2-210ENST00000627200 LAMC1P11047 1609 aa14.02□□□□□ -0.16
CHD2-210ENST00000627200 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
CHD2-210ENST00000627200 PIK3C2GO75747 1445 aa14.02□□□□□ -0.16
CHD2-210ENST00000627200 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.17
CHD2-210ENST00000627200 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
CHD2-210ENST00000627200 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
CHD2-210ENST00000627200 STK26Q9P289 416 aa14.01□□□□□ -0.17
CHD2-210ENST00000627200 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
CHD2-210ENST00000627200 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
CHD2-210ENST00000627200 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
CHD2-210ENST00000627200 TMEM132EQ6IEE7 984 aa14□□□□□ -0.17
CHD2-210ENST00000627200 TECPR2O15040 1411 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms