RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
SNRPA1-216ENST00000626000 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
SNRPA1-216ENST00000626000 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
SNRPA1-216ENST00000626000 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
SNRPA1-216ENST00000626000 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
SNRPA1-216ENST00000626000 PPP1R15AO75807 674 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-216ENST00000626000 LTKP29376 864 aa20.66■□□□□ 0.9
SNRPA1-216ENST00000626000 CPS1P31327 1500 aa20.66■□□□□ 0.9
SNRPA1-216ENST00000626000 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
SNRPA1-216ENST00000626000 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.9
SNRPA1-216ENST00000626000 TRIM26Q12899 539 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-216ENST00000626000 CERKQ8TCT0 537 aa20.63■□□□□ 0.89
SNRPA1-216ENST00000626000 RPGRIP1LQ68CZ1 1315 aa20.61■□□□□ 0.89
SNRPA1-216ENST00000626000 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
SNRPA1-216ENST00000626000 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
SNRPA1-216ENST00000626000 ZNF335Q9H4Z2 1342 aaPredicted RBP20.6■□□□□ 0.89
SNRPA1-216ENST00000626000 BCANQ96GW7 911 aa20.58■□□□□ 0.89
SNRPA1-216ENST00000626000 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
SNRPA1-216ENST00000626000 FOXD1Q16676 465 aa20.56■□□□□ 0.88
SNRPA1-216ENST00000626000 NEXMIFQ5QGS0 1516 aa20.56■□□□□ 0.88
SNRPA1-216ENST00000626000 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
SNRPA1-216ENST00000626000 SETBP1Q9Y6X0 1596 aa20.55■□□□□ 0.88
SNRPA1-216ENST00000626000 TBX22Q9Y458 520 aa20.54■□□□□ 0.88
SNRPA1-216ENST00000626000 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
SNRPA1-216ENST00000626000 SPATA31E1Q6ZUB1 1445 aa20.53■□□□□ 0.88
SNRPA1-216ENST00000626000 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
SNRPA1-216ENST00000626000 PPLO60437 1756 aa20.51■□□□□ 0.87
SNRPA1-216ENST00000626000 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
SNRPA1-216ENST00000626000 KCNA6P17658 529 aa20.5■□□□□ 0.87
SNRPA1-216ENST00000626000 SLC26A8Q96RN1 970 aa20.5■□□□□ 0.87
SNRPA1-216ENST00000626000 ADAMTS13Q76LX8 1427 aa20.48■□□□□ 0.87
SNRPA1-216ENST00000626000 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
SNRPA1-216ENST00000626000 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
SNRPA1-216ENST00000626000 IFT172Q9UG01 1749 aa20.46■□□□□ 0.87
SNRPA1-216ENST00000626000 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
SNRPA1-216ENST00000626000 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
SNRPA1-216ENST00000626000 NUTM2DQ5VT03 806 aaPredicted RBP20.45■□□□□ 0.86
SNRPA1-216ENST00000626000 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
SNRPA1-216ENST00000626000 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
SNRPA1-216ENST00000626000 NCOA3Q9Y6Q9 1424 aa20.42■□□□□ 0.86
SNRPA1-216ENST00000626000 MYOM2P54296 1465 aa20.42■□□□□ 0.86
SNRPA1-216ENST00000626000 TOM1O60784 492 aa20.4■□□□□ 0.86
SNRPA1-216ENST00000626000 LAMC1P11047 1609 aa20.39■□□□□ 0.86
SNRPA1-216ENST00000626000 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
SNRPA1-216ENST00000626000 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
SNRPA1-216ENST00000626000 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
SNRPA1-216ENST00000626000 XRN1Q8IZH2 1706 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-216ENST00000626000 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
SNRPA1-216ENST00000626000 UBAP1LF5GYI3 381 aa20.36■□□□□ 0.85
SNRPA1-216ENST00000626000 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
SNRPA1-216ENST00000626000 AMOTL2Q9Y2J4 779 aa20.35■□□□□ 0.85
SNRPA1-216ENST00000626000 SETD1AO15047 1707 aaKnown RBP20.35■□□□□ 0.85
SNRPA1-216ENST00000626000 NRXN1Q9ULB1 1477 aa20.35■□□□□ 0.85
SNRPA1-216ENST00000626000 METP08581 1390 aa20.33■□□□□ 0.84
SNRPA1-216ENST00000626000 MSH6P52701 1360 aa20.33■□□□□ 0.84
SNRPA1-216ENST00000626000 XIRP1Q702N8 1843 aaKnown RBP20.32■□□□□ 0.84
SNRPA1-216ENST00000626000 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
SNRPA1-216ENST00000626000 PTCH1Q13635 1447 aa20.32■□□□□ 0.84
SNRPA1-216ENST00000626000 DHX57Q6P158 1386 aaKnown RBP20.32■□□□□ 0.84
SNRPA1-216ENST00000626000 PTPRUQ92729 1446 aa20.3■□□□□ 0.84
SNRPA1-216ENST00000626000 C14orf37Q86TY3 774 aa20.28■□□□□ 0.84
SNRPA1-216ENST00000626000 DCCP43146 1447 aa20.27■□□□□ 0.84
SNRPA1-216ENST00000626000 DCAF11Q8TEB1 546 aa20.27■□□□□ 0.84
SNRPA1-216ENST00000626000 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-216ENST00000626000 C19orf44Q9H6X5 657 aa20.26■□□□□ 0.83
SNRPA1-216ENST00000626000 TECPR2O15040 1411 aa20.26■□□□□ 0.83
SNRPA1-216ENST00000626000 KNDC1Q76NI1 1749 aa20.25■□□□□ 0.83
SNRPA1-216ENST00000626000 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
SNRPA1-216ENST00000626000 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
SNRPA1-216ENST00000626000 ABCC11Q96J66 1382 aa20.23■□□□□ 0.83
SNRPA1-216ENST00000626000 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
SNRPA1-216ENST00000626000 ATF3P18847 181 aa20.22■□□□□ 0.83
SNRPA1-216ENST00000626000 KIAA1210Q9ULL0 1709 aa20.22■□□□□ 0.83
SNRPA1-216ENST00000626000 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-216ENST00000626000 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-216ENST00000626000 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-216ENST00000626000 SIRT1Q96EB6 747 aa20.2■□□□□ 0.82
SNRPA1-216ENST00000626000 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
SNRPA1-216ENST00000626000 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
SNRPA1-216ENST00000626000 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
SNRPA1-216ENST00000626000 PIP4K2BP78356 416 aa20.19■□□□□ 0.82
SNRPA1-216ENST00000626000 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
SNRPA1-216ENST00000626000 CLSPNQ9HAW4 1339 aa20.19■□□□□ 0.82
SNRPA1-216ENST00000626000 CFAP70Q5T0N1 1121 aa20.18■□□□□ 0.82
SNRPA1-216ENST00000626000 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
SNRPA1-216ENST00000626000 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
SNRPA1-216ENST00000626000 RBM33Q96EV2 1170 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-216ENST00000626000 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
SNRPA1-216ENST00000626000 ADGRB1O14514 1584 aa20.16■□□□□ 0.82
SNRPA1-216ENST00000626000 NALCNQ8IZF0 1738 aa20.16■□□□□ 0.82
SNRPA1-216ENST00000626000 NEUROD1Q13562 356 aa20.14■□□□□ 0.81
SNRPA1-216ENST00000626000 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
SNRPA1-216ENST00000626000 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
SNRPA1-216ENST00000626000 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
SNRPA1-216ENST00000626000 STK26Q9P289 416 aa20.13■□□□□ 0.81
SNRPA1-216ENST00000626000 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
SNRPA1-216ENST00000626000 L3MBTL2Q969R5 705 aa20.12■□□□□ 0.81
SNRPA1-216ENST00000626000 ROBO1Q9Y6N7 1651 aa20.11■□□□□ 0.81
SNRPA1-216ENST00000626000 MST1RQ04912 1400 aa20.08■□□□□ 0.8
SNRPA1-216ENST00000626000 POGKQ9P215 609 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms