RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
SSBP4-215ENST00000625926 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
SSBP4-215ENST00000625926 IQGAP3Q86VI3 1631 aa16.32■□□□□ 0.2
SSBP4-215ENST00000625926 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
SSBP4-215ENST00000625926 ZFYVE9O95405 1425 aa16.31■□□□□ 0.2
SSBP4-215ENST00000625926 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
SSBP4-215ENST00000625926 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-215ENST00000625926 HFM1A2PYH4 1435 aa16.3■□□□□ 0.2
SSBP4-215ENST00000625926 HSPA1LP34931 641 aa16.3■□□□□ 0.2
SSBP4-215ENST00000625926 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-215ENST00000625926 PROSER2Q86WR7 435 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-215ENST00000625926 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
SSBP4-215ENST00000625926 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.2
SSBP4-215ENST00000625926 E9PCH4 1651 aa16.27■□□□□ 0.19
SSBP4-215ENST00000625926 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
SSBP4-215ENST00000625926 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
SSBP4-215ENST00000625926 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
SSBP4-215ENST00000625926 TMEM131LA2VDJ0 1609 aa16.25■□□□□ 0.19
SSBP4-215ENST00000625926 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
SSBP4-215ENST00000625926 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
SSBP4-215ENST00000625926 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
SSBP4-215ENST00000625926 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
SSBP4-215ENST00000625926 NKTRP30414 1462 aaKnown RBP16.2■□□□□ 0.18
SSBP4-215ENST00000625926 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
SSBP4-215ENST00000625926 MSH6P52701 1360 aa16.17■□□□□ 0.18
SSBP4-215ENST00000625926 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
SSBP4-215ENST00000625926 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
SSBP4-215ENST00000625926 ACIN1Q9UKV3 1341 aaKnown RBP16.17■□□□□ 0.18
SSBP4-215ENST00000625926 C14orf37Q86TY3 774 aa16.16■□□□□ 0.18
SSBP4-215ENST00000625926 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
SSBP4-215ENST00000625926 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-215ENST00000625926 TRPM2O94759 1503 aa16.15■□□□□ 0.18
SSBP4-215ENST00000625926 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-215ENST00000625926 NWD1Q149M9 1564 aa16.15■□□□□ 0.18
SSBP4-215ENST00000625926 FOXD1Q16676 465 aa16.15■□□□□ 0.18
SSBP4-215ENST00000625926 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
SSBP4-215ENST00000625926 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
SSBP4-215ENST00000625926 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
SSBP4-215ENST00000625926 C19orf44Q9H6X5 657 aa16.13■□□□□ 0.17
SSBP4-215ENST00000625926 DIP2AQ14689 1571 aa16.12■□□□□ 0.17
SSBP4-215ENST00000625926 METP08581 1390 aa16.11■□□□□ 0.17
SSBP4-215ENST00000625926 SPHKAPQ2M3C7 1700 aa16.11■□□□□ 0.17
SSBP4-215ENST00000625926 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
SSBP4-215ENST00000625926 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
SSBP4-215ENST00000625926 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
SSBP4-215ENST00000625926 ATF3P18847 181 aa16.1■□□□□ 0.17
SSBP4-215ENST00000625926 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
SSBP4-215ENST00000625926 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
SSBP4-215ENST00000625926 SETBP1Q9Y6X0 1596 aa16.08■□□□□ 0.16
SSBP4-215ENST00000625926 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.16
SSBP4-215ENST00000625926 NEXMIFQ5QGS0 1516 aa16.07■□□□□ 0.16
SSBP4-215ENST00000625926 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
SSBP4-215ENST00000625926 RGL3Q3MIN7 710 aa16.06■□□□□ 0.16
SSBP4-215ENST00000625926 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
SSBP4-215ENST00000625926 RAB3GAP2Q9H2M9 1393 aa16.04■□□□□ 0.16
SSBP4-215ENST00000625926 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
SSBP4-215ENST00000625926 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
SSBP4-215ENST00000625926 SPATA31E1Q6ZUB1 1445 aa16.01■□□□□ 0.15
SSBP4-215ENST00000625926 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
SSBP4-215ENST00000625926 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
SSBP4-215ENST00000625926 HRCP23327 699 aa16■□□□□ 0.15
SSBP4-215ENST00000625926 DCCP43146 1447 aa16■□□□□ 0.15
SSBP4-215ENST00000625926 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
SSBP4-215ENST00000625926 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-215ENST00000625926 ROBO1Q9Y6N7 1651 aa15.98■□□□□ 0.15
SSBP4-215ENST00000625926 ROBO2Q9HCK4 1378 aa15.97■□□□□ 0.15
SSBP4-215ENST00000625926 JCADQ9P266 1359 aa15.97■□□□□ 0.15
SSBP4-215ENST00000625926 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
SSBP4-215ENST00000625926 XRN1Q8IZH2 1706 aaKnown RBP15.96■□□□□ 0.15
SSBP4-215ENST00000625926 KIF1BO60333 1816 aa15.96■□□□□ 0.14
SSBP4-215ENST00000625926 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
SSBP4-215ENST00000625926 MST1RQ04912 1400 aa15.94■□□□□ 0.14
SSBP4-215ENST00000625926 STK26Q9P289 416 aa15.93■□□□□ 0.14
SSBP4-215ENST00000625926 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
SSBP4-215ENST00000625926 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
SSBP4-215ENST00000625926 TMEM132EQ6IEE7 984 aa15.92■□□□□ 0.14
SSBP4-215ENST00000625926 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
SSBP4-215ENST00000625926 C14orf93Q9H972 538 aaKnown RBP15.91■□□□□ 0.14
SSBP4-215ENST00000625926 LRPPRCP42704 1394 aaKnown RBP15.9■□□□□ 0.14
SSBP4-215ENST00000625926 ABCC11Q96J66 1382 aa15.9■□□□□ 0.14
SSBP4-215ENST00000625926 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
SSBP4-215ENST00000625926 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
SSBP4-215ENST00000625926 SETD1AO15047 1707 aaKnown RBP15.9■□□□□ 0.14
SSBP4-215ENST00000625926 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
SSBP4-215ENST00000625926 CFAP70Q5T0N1 1121 aa15.88■□□□□ 0.13
SSBP4-215ENST00000625926 SIRT1Q96EB6 747 aa15.88■□□□□ 0.13
SSBP4-215ENST00000625926 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
SSBP4-215ENST00000625926 C1orf167Q5SNV9 1468 aa15.88■□□□□ 0.13
SSBP4-215ENST00000625926 ASXL1Q8IXJ9 1541 aa15.88■□□□□ 0.13
SSBP4-215ENST00000625926 AHDC1Q5TGY3 1603 aaPredicted RBP15.87■□□□□ 0.13
SSBP4-215ENST00000625926 DDX17Q92841 729 aaKnown RBP15.87■□□□□ 0.13
SSBP4-215ENST00000625926 TECPR2O15040 1411 aa15.86■□□□□ 0.13
SSBP4-215ENST00000625926 PPLO60437 1756 aa15.86■□□□□ 0.13
SSBP4-215ENST00000625926 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
SSBP4-215ENST00000625926 STAC3Q96MF2 364 aa15.86■□□□□ 0.13
SSBP4-215ENST00000625926 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
SSBP4-215ENST00000625926 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
SSBP4-215ENST00000625926 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
SSBP4-215ENST00000625926 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
SSBP4-215ENST00000625926 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms