RNA–Protein interactions for RNA: ENST00000625925.2

TCF4-251, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-251ENST00000625925 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
TCF4-251ENST00000625925 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
TCF4-251ENST00000625925 ITGAEP38570 1179 aa12.39□□□□□ -0.43
TCF4-251ENST00000625925 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
TCF4-251ENST00000625925 PPARGC1BQ86YN6 1023 aaKnown RBP12.39□□□□□ -0.43
TCF4-251ENST00000625925 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
TCF4-251ENST00000625925 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
TCF4-251ENST00000625925 LRRC7Q96NW7 1537 aa12.38□□□□□ -0.43
TCF4-251ENST00000625925 TXNDC2Q86VQ3 553 aa12.38□□□□□ -0.43
TCF4-251ENST00000625925 PPLO60437 1756 aa12.38□□□□□ -0.43
TCF4-251ENST00000625925 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
TCF4-251ENST00000625925 LTKP29376 864 aa12.37□□□□□ -0.43
TCF4-251ENST00000625925 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
TCF4-251ENST00000625925 NRXN3Q9Y4C0 1643 aa12.37□□□□□ -0.43
TCF4-251ENST00000625925 PIK3R4Q99570 1358 aa12.36□□□□□ -0.43
TCF4-251ENST00000625925 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCF4-251ENST00000625925 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
TCF4-251ENST00000625925 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
TCF4-251ENST00000625925 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
TCF4-251ENST00000625925 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
TCF4-251ENST00000625925 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
TCF4-251ENST00000625925 ADRA2BP18089 450 aa12.31□□□□□ -0.44
TCF4-251ENST00000625925 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
TCF4-251ENST00000625925 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
TCF4-251ENST00000625925 TOM1O60784 492 aa12.3□□□□□ -0.44
TCF4-251ENST00000625925 KCNA6P17658 529 aa12.3□□□□□ -0.44
TCF4-251ENST00000625925 PRAG1Q86YV5 1406 aa12.29□□□□□ -0.44
TCF4-251ENST00000625925 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
TCF4-251ENST00000625925 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
TCF4-251ENST00000625925 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
TCF4-251ENST00000625925 LAMC1P11047 1609 aa12.28□□□□□ -0.44
TCF4-251ENST00000625925 UBAP1LF5GYI3 381 aa12.27□□□□□ -0.45
TCF4-251ENST00000625925 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
TCF4-251ENST00000625925 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.45
TCF4-251ENST00000625925 CCDC144AA2RUR9 1427 aa12.27□□□□□ -0.45
TCF4-251ENST00000625925 MSH5O43196 834 aa12.26□□□□□ -0.45
TCF4-251ENST00000625925 HRCP23327 699 aa12.26□□□□□ -0.45
TCF4-251ENST00000625925 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.25□□□□□ -0.45
TCF4-251ENST00000625925 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
TCF4-251ENST00000625925 DCCP43146 1447 aa12.25□□□□□ -0.45
TCF4-251ENST00000625925 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
TCF4-251ENST00000625925 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
TCF4-251ENST00000625925 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
TCF4-251ENST00000625925 ROBO1Q9Y6N7 1651 aa12.24□□□□□ -0.45
TCF4-251ENST00000625925 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
TCF4-251ENST00000625925 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
TCF4-251ENST00000625925 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
TCF4-251ENST00000625925 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
TCF4-251ENST00000625925 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
TCF4-251ENST00000625925 PTCH1Q13635 1447 aa12.21□□□□□ -0.45
TCF4-251ENST00000625925 MSH6P52701 1360 aa12.21□□□□□ -0.45
TCF4-251ENST00000625925 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
TCF4-251ENST00000625925 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
TCF4-251ENST00000625925 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.45
TCF4-251ENST00000625925 MYOM2P54296 1465 aa12.21□□□□□ -0.46
TCF4-251ENST00000625925 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
TCF4-251ENST00000625925 NRXN1Q9ULB1 1477 aa12.19□□□□□ -0.46
TCF4-251ENST00000625925 PHLPP1O60346 1717 aa12.18□□□□□ -0.46
TCF4-251ENST00000625925 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
TCF4-251ENST00000625925 BCANQ96GW7 911 aa12.18□□□□□ -0.46
TCF4-251ENST00000625925 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
TCF4-251ENST00000625925 AHDC1Q5TGY3 1603 aaPredicted RBP12.18□□□□□ -0.46
TCF4-251ENST00000625925 NHSL1Q5SYE7 1610 aa12.17□□□□□ -0.46
TCF4-251ENST00000625925 TECPR2O15040 1411 aa12.17□□□□□ -0.46
TCF4-251ENST00000625925 PIK3C2GO75747 1445 aa12.17□□□□□ -0.46
TCF4-251ENST00000625925 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
TCF4-251ENST00000625925 ADGRL3Q9HAR2 1447 aa12.16□□□□□ -0.46
TCF4-251ENST00000625925 CDC42BPGQ6DT37 1551 aa12.15□□□□□ -0.46
TCF4-251ENST00000625925 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
TCF4-251ENST00000625925 METP08581 1390 aa12.15□□□□□ -0.46
TCF4-251ENST00000625925 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.47
TCF4-251ENST00000625925 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
TCF4-251ENST00000625925 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
TCF4-251ENST00000625925 C19orf44Q9H6X5 657 aa12.14□□□□□ -0.47
TCF4-251ENST00000625925 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
TCF4-251ENST00000625925 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
TCF4-251ENST00000625925 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
TCF4-251ENST00000625925 ASXL1Q8IXJ9 1541 aa12.12□□□□□ -0.47
TCF4-251ENST00000625925 HSPA1LP34931 641 aa12.12□□□□□ -0.47
TCF4-251ENST00000625925 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
TCF4-251ENST00000625925 NUTM2DQ5VT03 806 aaPredicted RBP12.11□□□□□ -0.47
TCF4-251ENST00000625925 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
TCF4-251ENST00000625925 DLC1Q96QB1 1528 aa12.1□□□□□ -0.47
TCF4-251ENST00000625925 MST1RQ04912 1400 aa12.1□□□□□ -0.47
TCF4-251ENST00000625925 FMN2Q9NZ56 1722 aa12.09□□□□□ -0.47
TCF4-251ENST00000625925 ABCC11Q96J66 1382 aa12.08□□□□□ -0.48
TCF4-251ENST00000625925 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
TCF4-251ENST00000625925 ATF3P18847 181 aa12.08□□□□□ -0.48
TCF4-251ENST00000625925 ADGRB2O60241 1585 aa12.08□□□□□ -0.48
TCF4-251ENST00000625925 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
TCF4-251ENST00000625925 DISP3Q9P2K9 1392 aa12.07□□□□□ -0.48
TCF4-251ENST00000625925 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
TCF4-251ENST00000625925 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
TCF4-251ENST00000625925 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
TCF4-251ENST00000625925 ADGRF5Q8IZF2 1346 aa12.06□□□□□ -0.48
TCF4-251ENST00000625925 ARHGEF28Q8N1W1 1705 aaKnown RBP12.06□□□□□ -0.48
TCF4-251ENST00000625925 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
TCF4-251ENST00000625925 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
TCF4-251ENST00000625925 JCADQ9P266 1359 aa12.05□□□□□ -0.48
TCF4-251ENST00000625925 ITSN1Q15811 1721 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms