RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SCAPERQ9BY12 1400 aa14.86□□□□□ -0.03
VARS2-213ENST00000625423 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
VARS2-213ENST00000625423 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
VARS2-213ENST00000625423 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
VARS2-213ENST00000625423 PDE4AP27815 886 aa14.86□□□□□ -0.03
VARS2-213ENST00000625423 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
VARS2-213ENST00000625423 KIF3BO15066 747 aa14.85□□□□□ -0.03
VARS2-213ENST00000625423 SPHKAPQ2M3C7 1700 aa14.85□□□□□ -0.03
VARS2-213ENST00000625423 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
VARS2-213ENST00000625423 KANK1Q14678 1352 aa14.84□□□□□ -0.03
VARS2-213ENST00000625423 CEP152O94986 1710 aa14.84□□□□□ -0.03
VARS2-213ENST00000625423 SYNMO15061 1565 aa14.83□□□□□ -0.04
VARS2-213ENST00000625423 MS4A1P11836 297 aa14.83□□□□□ -0.04
VARS2-213ENST00000625423 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
VARS2-213ENST00000625423 SKAP1Q86WV1 359 aa14.83□□□□□ -0.04
VARS2-213ENST00000625423 BACH2Q9BYV9 841 aa14.83□□□□□ -0.04
VARS2-213ENST00000625423 ARAP3Q8WWN8 1544 aa14.83□□□□□ -0.04
VARS2-213ENST00000625423 ASXL1Q8IXJ9 1541 aa14.82□□□□□ -0.04
VARS2-213ENST00000625423 EIF3AQ14152 1382 aaKnown RBP14.82□□□□□ -0.04
VARS2-213ENST00000625423 DEPDC5O75140 1603 aa14.82□□□□□ -0.04
VARS2-213ENST00000625423 DEKP35659 375 aaKnown RBP14.82□□□□□ -0.04
VARS2-213ENST00000625423 CFAP70Q5T0N1 1121 aa14.82□□□□□ -0.04
VARS2-213ENST00000625423 FANCAO15360 1455 aa14.81□□□□□ -0.04
VARS2-213ENST00000625423 ATP7AQ04656 1500 aa14.81□□□□□ -0.04
VARS2-213ENST00000625423 TET3O43151 1660 aa14.81□□□□□ -0.04
VARS2-213ENST00000625423 ZNF521Q96K83 1311 aa14.81□□□□□ -0.04
VARS2-213ENST00000625423 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
VARS2-213ENST00000625423 CCDC146Q8IYE0 955 aa14.8□□□□□ -0.04
VARS2-213ENST00000625423 PIK3C2GO75747 1445 aa14.79□□□□□ -0.04
VARS2-213ENST00000625423 ADGRF5Q8IZF2 1346 aa14.79□□□□□ -0.04
VARS2-213ENST00000625423 VWDEQ8N2E2 1590 aa14.78□□□□□ -0.04
VARS2-213ENST00000625423 UGGT1Q9NYU2 1555 aa14.78□□□□□ -0.04
VARS2-213ENST00000625423 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
VARS2-213ENST00000625423 INO80Q9ULG1 1556 aaPredicted RBP14.78□□□□□ -0.04
VARS2-213ENST00000625423 MYOM1P52179 1685 aa14.77□□□□□ -0.04
VARS2-213ENST00000625423 ADGRL1O94910 1474 aa14.77□□□□□ -0.05
VARS2-213ENST00000625423 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
VARS2-213ENST00000625423 SLFN5Q08AF3 891 aa14.76□□□□□ -0.05
VARS2-213ENST00000625423 APAF1O14727 1248 aa14.76□□□□□ -0.05
VARS2-213ENST00000625423 ABCA9Q8IUA7 1624 aa14.76□□□□□ -0.05
VARS2-213ENST00000625423 ERVK-7P63135 1459 aa14.75□□□□□ -0.05
VARS2-213ENST00000625423 CARD14Q9BXL6 1004 aa14.75□□□□□ -0.05
VARS2-213ENST00000625423 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
VARS2-213ENST00000625423 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
VARS2-213ENST00000625423 KDM5AP29375 1690 aaKnown RBP14.74□□□□□ -0.05
VARS2-213ENST00000625423 KIAA1210Q9ULL0 1709 aa14.74□□□□□ -0.05
VARS2-213ENST00000625423 MAP3K4Q9Y6R4 1608 aa14.74□□□□□ -0.05
VARS2-213ENST00000625423 MROH1Q8NDA8 1641 aa14.73□□□□□ -0.05
VARS2-213ENST00000625423 MYOM2P54296 1465 aa14.73□□□□□ -0.05
VARS2-213ENST00000625423 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
VARS2-213ENST00000625423 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
VARS2-213ENST00000625423 ABCA6Q8N139 1617 aa14.73□□□□□ -0.05
VARS2-213ENST00000625423 RTL5Q5HYW3 569 aaPredicted RBP14.73□□□□□ -0.05
VARS2-213ENST00000625423 TRMT2AQ8IZ69 625 aaKnown RBP14.73□□□□□ -0.05
VARS2-213ENST00000625423 NEURL4Q96JN8 1562 aa14.72□□□□□ -0.05
VARS2-213ENST00000625423 CENPQQ7L2Z9 268 aaPredicted RBP14.72□□□□□ -0.05
VARS2-213ENST00000625423 CHGAP10645 457 aaKnown RBP14.71□□□□□ -0.05
VARS2-213ENST00000625423 EFCAB6Q5THR3 1501 aa14.7□□□□□ -0.06
VARS2-213ENST00000625423 LAS1LQ9Y4W2 734 aaKnown RBP14.7□□□□□ -0.06
VARS2-213ENST00000625423 ASXL2Q76L83 1435 aa14.69□□□□□ -0.06
VARS2-213ENST00000625423 BCAR3O75815 825 aa14.69□□□□□ -0.06
VARS2-213ENST00000625423 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
VARS2-213ENST00000625423 NOS1P29475 1434 aa14.68□□□□□ -0.06
VARS2-213ENST00000625423 NKTRP30414 1462 aaKnown RBP14.68□□□□□ -0.06
VARS2-213ENST00000625423 CENPJQ9HC77 1338 aaPredicted RBP14.68□□□□□ -0.06
VARS2-213ENST00000625423 E9PSI1 815 aa14.68□□□□□ -0.06
VARS2-213ENST00000625423 TRAK1Q9UPV9 953 aa14.68□□□□□ -0.06
VARS2-213ENST00000625423 KIF1BO60333 1816 aa14.67□□□□□ -0.06
VARS2-213ENST00000625423 PPRC1Q5VV67 1664 aaKnown RBP14.67□□□□□ -0.06
VARS2-213ENST00000625423 NRXN1Q9ULB1 1477 aa14.67□□□□□ -0.06
VARS2-213ENST00000625423 MROH2AA6NES4 1674 aa14.67□□□□□ -0.06
VARS2-213ENST00000625423 KIDINS220Q9ULH0 1771 aa14.66□□□□□ -0.06
VARS2-213ENST00000625423 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
VARS2-213ENST00000625423 SBNO2Q9Y2G9 1366 aa14.65□□□□□ -0.06
VARS2-213ENST00000625423 GGT6Q6P531 493 aa14.65□□□□□ -0.06
VARS2-213ENST00000625423 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
VARS2-213ENST00000625423 DDRGK1Q96HY6 314 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 SLC12A5Q9H2X9 1139 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 POLR3AO14802 1390 aaPredicted RBP14.64□□□□□ -0.07
VARS2-213ENST00000625423 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 LMTK2Q8IWU2 1503 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 ZNF518AQ6AHZ1 1483 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 NSD3Q9BZ95 1437 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 NEFMP07197 916 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 RGS3P49796 1198 aa14.64□□□□□ -0.07
VARS2-213ENST00000625423 FAM161AQ3B820 660 aa14.63□□□□□ -0.07
VARS2-213ENST00000625423 WWC1Q8IX03 1113 aa14.63□□□□□ -0.07
VARS2-213ENST00000625423 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
VARS2-213ENST00000625423 ADGRB3O60242 1522 aa14.63□□□□□ -0.07
VARS2-213ENST00000625423 MYO3AQ8NEV4 1616 aa14.62□□□□□ -0.07
VARS2-213ENST00000625423 C8orf34Q49A92 452 aa14.62□□□□□ -0.07
VARS2-213ENST00000625423 C14orf93Q9H972 538 aaKnown RBP14.62□□□□□ -0.07
VARS2-213ENST00000625423 NPATQ14207 1427 aa14.62□□□□□ -0.07
VARS2-213ENST00000625423 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
VARS2-213ENST00000625423 RRP7AQ9Y3A4 280 aaKnown RBP14.6□□□□□ -0.07
VARS2-213ENST00000625423 SETBP1Q9Y6X0 1596 aa14.6□□□□□ -0.07
VARS2-213ENST00000625423 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
VARS2-213ENST00000625423 SLC4A3P48751 1232 aa14.6□□□□□ -0.07
VARS2-213ENST00000625423 IGHDP01880 384 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms