RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-210ENST00000625282 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
SPTAN1-210ENST00000625282 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
SPTAN1-210ENST00000625282 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.582e-6■■■■■ 28
SPTAN1-210ENST00000625282 ZSCAN30Q86W11 494 aa11.41□□□□□ -0.58
SPTAN1-210ENST00000625282 NAIPQ13075 1403 aa11.4□□□□□ -0.58
SPTAN1-210ENST00000625282 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
SPTAN1-210ENST00000625282 MFAP1P55081 439 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-210ENST00000625282 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.59
SPTAN1-210ENST00000625282 ATP10BO94823 1461 aa11.4□□□□□ -0.59
SPTAN1-210ENST00000625282 NASPP49321 788 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-210ENST00000625282 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
SPTAN1-210ENST00000625282 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 SMAP1Q8IYB5 467 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 PTPRKQ15262 1439 aa11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 GBP4Q96PP9 640 aa11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 NAP1L2Q9ULW6 460 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 MAPK8IP3Q9UPT6 1336 aa11.38□□□□□ -0.59
SPTAN1-210ENST00000625282 OFD1O75665 1012 aa11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 RAPGEF6Q8TEU7 1601 aa11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 XPCQ01831 940 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 CCDC173Q0VFZ6 552 aa11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 GOLGA6L22H0YM25 854 aa11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 RIPK4P57078 832 aa11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 MTERF4Q7Z6M4 381 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 ANTXR1Q9H6X2 564 aa11.37□□□□□ -0.59
SPTAN1-210ENST00000625282 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
SPTAN1-210ENST00000625282 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-210ENST00000625282 C9orf84Q5VXU9 1444 aa11.36□□□□□ -0.59
SPTAN1-210ENST00000625282 ROCK2O75116 1388 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-210ENST00000625282 DAPK1P53355 1430 aa11.36□□□□□ -0.59
SPTAN1-210ENST00000625282 PTMAP06454 111 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-210ENST00000625282 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
SPTAN1-210ENST00000625282 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
SPTAN1-210ENST00000625282 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-210ENST00000625282 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
SPTAN1-210ENST00000625282 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 USP19O94966 1318 aa11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 IGHDP01880 384 aa11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 CBX1P83916 185 aa11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 GAS2L3Q86XJ1 694 aa11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
SPTAN1-210ENST00000625282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPTAN1-210ENST00000625282 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
SPTAN1-210ENST00000625282 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
SPTAN1-210ENST00000625282 C22orf23Q9BZE7 217 aa11.33□□□□□ -0.6
SPTAN1-210ENST00000625282 KDM5BQ9UGL1 1544 aa11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 VGLL3A8MV65 326 aa11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 BCAR3O75815 825 aa11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 KIF14Q15058 1648 aa11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 TBC1D32Q96NH3 1257 aa11.32□□□□□ -0.6
SPTAN1-210ENST00000625282 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
SPTAN1-210ENST00000625282 ABCC5O15440 1437 aa11.31□□□□□ -0.6
SPTAN1-210ENST00000625282 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
SPTAN1-210ENST00000625282 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
SPTAN1-210ENST00000625282 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
SPTAN1-210ENST00000625282 PANK1Q8TE04 598 aa11.3□□□□□ -0.6
SPTAN1-210ENST00000625282 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
SPTAN1-210ENST00000625282 CCDC144AA2RUR9 1427 aa11.3□□□□□ -0.6
SPTAN1-210ENST00000625282 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPTAN1-210ENST00000625282 CCDC146Q8IYE0 955 aa11.29□□□□□ -0.6
SPTAN1-210ENST00000625282 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
SPTAN1-210ENST00000625282 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
SPTAN1-210ENST00000625282 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
SPTAN1-210ENST00000625282 ASXL2Q76L83 1435 aa11.29□□□□□ -0.6
SPTAN1-210ENST00000625282 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-210ENST00000625282 IGSF3O75054 1194 aa11.28□□□□□ -0.6
SPTAN1-210ENST00000625282 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-210ENST00000625282 DMTNQ08495 405 aa11.28□□□□□ -0.6
SPTAN1-210ENST00000625282 STK26Q9P289 416 aa11.28□□□□□ -0.6
SPTAN1-210ENST00000625282 DUSP27Q5VZP5 1158 aa11.27□□□□□ -0.6
SPTAN1-210ENST00000625282 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.6
SPTAN1-210ENST00000625282 SPATA31E1Q6ZUB1 1445 aa11.27□□□□□ -0.6
SPTAN1-210ENST00000625282 PLEKHH2Q8IVE3 1493 aa11.27□□□□□ -0.6
SPTAN1-210ENST00000625282 CGNL1Q0VF96 1302 aa11.27□□□□□ -0.61
SPTAN1-210ENST00000625282 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-210ENST00000625282 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
SPTAN1-210ENST00000625282 CHD1O14646 1710 aa11.27□□□□□ -0.61
SPTAN1-210ENST00000625282 PTMSP20962 102 aa11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 PMFBP1Q8TBY8 1022 aa11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 CCDC141Q6ZP82 1450 aa11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 TERF1P54274 439 aa11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
SPTAN1-210ENST00000625282 SASS6Q6UVJ0 657 aa11.25□□□□□ -0.61
SPTAN1-210ENST00000625282 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
SPTAN1-210ENST00000625282 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-210ENST00000625282 MPNDQ8N594 471 aa11.24□□□□□ -0.61
SPTAN1-210ENST00000625282 ANKRD30BQ9BXX2 1392 aa11.24□□□□□ -0.61
SPTAN1-210ENST00000625282 FANCAO15360 1455 aa11.24□□□□□ -0.61
SPTAN1-210ENST00000625282 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
SPTAN1-210ENST00000625282 ABCC2Q92887 1545 aa11.24□□□□□ -0.61
SPTAN1-210ENST00000625282 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms