RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
LINC00963-220ENST00000625171 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
LINC00963-220ENST00000625171 FBXO31Q5XUX0 539 aaPredicted RBP16.68■□□□□ 0.26
LINC00963-220ENST00000625171 NRXN1Q9ULB1 1477 aa16.67■□□□□ 0.26
LINC00963-220ENST00000625171 ZNF142P52746 1687 aaPredicted RBP16.67■□□□□ 0.26
LINC00963-220ENST00000625171 UGGT1Q9NYU2 1555 aa16.67■□□□□ 0.26
LINC00963-220ENST00000625171 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.261e-7■■■■□ 25.4
LINC00963-220ENST00000625171 UBAP1LF5GYI3 381 aa16.65■□□□□ 0.26
LINC00963-220ENST00000625171 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
LINC00963-220ENST00000625171 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
LINC00963-220ENST00000625171 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
LINC00963-220ENST00000625171 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
LINC00963-220ENST00000625171 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
LINC00963-220ENST00000625171 VGFO15240 615 aaPredicted RBP16.63■□□□□ 0.25
LINC00963-220ENST00000625171 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
LINC00963-220ENST00000625171 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
LINC00963-220ENST00000625171 LAMC1P11047 1609 aa16.62■□□□□ 0.25
LINC00963-220ENST00000625171 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
LINC00963-220ENST00000625171 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
LINC00963-220ENST00000625171 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
LINC00963-220ENST00000625171 TRPM1Q7Z4N2 1603 aa16.61■□□□□ 0.25
LINC00963-220ENST00000625171 KIAA1210Q9ULL0 1709 aa16.61■□□□□ 0.25
LINC00963-220ENST00000625171 TNRQ92752 1358 aa16.61■□□□□ 0.25
LINC00963-220ENST00000625171 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
LINC00963-220ENST00000625171 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
LINC00963-220ENST00000625171 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
LINC00963-220ENST00000625171 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.24
LINC00963-220ENST00000625171 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
LINC00963-220ENST00000625171 NEXMIFQ5QGS0 1516 aa16.58■□□□□ 0.24
LINC00963-220ENST00000625171 PPLO60437 1756 aa16.58■□□□□ 0.24
LINC00963-220ENST00000625171 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
LINC00963-220ENST00000625171 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
LINC00963-220ENST00000625171 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
LINC00963-220ENST00000625171 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
LINC00963-220ENST00000625171 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
LINC00963-220ENST00000625171 USP47Q96K76 1375 aa16.55■□□□□ 0.24
LINC00963-220ENST00000625171 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
LINC00963-220ENST00000625171 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC00963-220ENST00000625171 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
LINC00963-220ENST00000625171 SETBP1Q9Y6X0 1596 aa16.54■□□□□ 0.24
LINC00963-220ENST00000625171 CPS1P31327 1500 aa16.54■□□□□ 0.24
LINC00963-220ENST00000625171 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
LINC00963-220ENST00000625171 TOM1O60784 492 aa16.51■□□□□ 0.23
LINC00963-220ENST00000625171 DIEXFQ68CQ4 756 aaKnown RBP16.51■□□□□ 0.23
LINC00963-220ENST00000625171 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
LINC00963-220ENST00000625171 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
LINC00963-220ENST00000625171 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
LINC00963-220ENST00000625171 TMEM2Q9UHN6 1383 aa16.49■□□□□ 0.23
LINC00963-220ENST00000625171 RIMS2Q9UQ26 1411 aa16.48■□□□□ 0.23
LINC00963-220ENST00000625171 HSPA1LP34931 641 aa16.48■□□□□ 0.23
LINC00963-220ENST00000625171 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
LINC00963-220ENST00000625171 POLR1AO95602 1720 aaPredicted RBP16.48■□□□□ 0.23
LINC00963-220ENST00000625171 UBR1Q8IWV7 1749 aa16.47■□□□□ 0.23
LINC00963-220ENST00000625171 ARHGAP23Q9P227 1491 aa16.47■□□□□ 0.23
LINC00963-220ENST00000625171 ADGRB1O14514 1584 aa16.47■□□□□ 0.23
LINC00963-220ENST00000625171 SLIT1O75093 1534 aa16.46■□□□□ 0.23
LINC00963-220ENST00000625171 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
LINC00963-220ENST00000625171 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
LINC00963-220ENST00000625171 TESK2Q96S53 571 aa16.45■□□□□ 0.22
LINC00963-220ENST00000625171 EIF3AQ14152 1382 aaKnown RBP16.45■□□□□ 0.22
LINC00963-220ENST00000625171 SBNO2Q9Y2G9 1366 aa16.45■□□□□ 0.22
LINC00963-220ENST00000625171 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
LINC00963-220ENST00000625171 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
LINC00963-220ENST00000625171 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
LINC00963-220ENST00000625171 MED14O60244 1454 aa16.43■□□□□ 0.22
LINC00963-220ENST00000625171 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
LINC00963-220ENST00000625171 PIP4K2BP78356 416 aa16.43■□□□□ 0.22
LINC00963-220ENST00000625171 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
LINC00963-220ENST00000625171 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
LINC00963-220ENST00000625171 C11orf95C9JLR9 678 aaPredicted RBP16.42■□□□□ 0.22
LINC00963-220ENST00000625171 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
LINC00963-220ENST00000625171 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
LINC00963-220ENST00000625171 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
LINC00963-220ENST00000625171 ALKQ9UM73 1620 aa16.4■□□□□ 0.22
LINC00963-220ENST00000625171 KIF7Q2M1P5 1343 aa16.4■□□□□ 0.22
LINC00963-220ENST00000625171 NPHP4O75161 1426 aaPredicted RBP16.39■□□□□ 0.21
LINC00963-220ENST00000625171 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
LINC00963-220ENST00000625171 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
LINC00963-220ENST00000625171 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
LINC00963-220ENST00000625171 TMF1P82094 1093 aa16.37■□□□□ 0.21
LINC00963-220ENST00000625171 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
LINC00963-220ENST00000625171 LTKP29376 864 aa16.36■□□□□ 0.21
LINC00963-220ENST00000625171 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
LINC00963-220ENST00000625171 NUTM2DQ5VT03 806 aaPredicted RBP16.36■□□□□ 0.21
LINC00963-220ENST00000625171 TXNDC2Q86VQ3 553 aa16.36■□□□□ 0.21
LINC00963-220ENST00000625171 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
LINC00963-220ENST00000625171 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
LINC00963-220ENST00000625171 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
LINC00963-220ENST00000625171 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
LINC00963-220ENST00000625171 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
LINC00963-220ENST00000625171 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
LINC00963-220ENST00000625171 CENPJQ9HC77 1338 aaPredicted RBP16.34■□□□□ 0.21
LINC00963-220ENST00000625171 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
LINC00963-220ENST00000625171 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
LINC00963-220ENST00000625171 TECPR2O15040 1411 aa16.33■□□□□ 0.2
LINC00963-220ENST00000625171 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
LINC00963-220ENST00000625171 LRRC7Q96NW7 1537 aa16.31■□□□□ 0.2
LINC00963-220ENST00000625171 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
LINC00963-220ENST00000625171 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
LINC00963-220ENST00000625171 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms