RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
AC002540.1-201ENST00000625023 POTEHQ6S545 545 aa12.9□□□□□ -0.34
AC002540.1-201ENST00000625023 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
AC002540.1-201ENST00000625023 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
AC002540.1-201ENST00000625023 NPHP4O75161 1426 aaPredicted RBP12.9□□□□□ -0.34
AC002540.1-201ENST00000625023 LTKP29376 864 aa12.89□□□□□ -0.35
AC002540.1-201ENST00000625023 TMEM2Q9UHN6 1383 aa12.89□□□□□ -0.35
AC002540.1-201ENST00000625023 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
AC002540.1-201ENST00000625023 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
AC002540.1-201ENST00000625023 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
AC002540.1-201ENST00000625023 NUP155O75694 1391 aa12.88□□□□□ -0.35
AC002540.1-201ENST00000625023 SCAF11Q99590 1463 aaKnown RBP12.88□□□□□ -0.35
AC002540.1-201ENST00000625023 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
AC002540.1-201ENST00000625023 MYO5BQ9ULV0 1848 aa12.86□□□□□ -0.35
AC002540.1-201ENST00000625023 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
AC002540.1-201ENST00000625023 ZFYVE9O95405 1425 aa12.85□□□□□ -0.35
AC002540.1-201ENST00000625023 CPS1P31327 1500 aa12.83□□□□□ -0.36
AC002540.1-201ENST00000625023 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.36
AC002540.1-201ENST00000625023 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
AC002540.1-201ENST00000625023 TRPM2O94759 1503 aa12.79□□□□□ -0.36
AC002540.1-201ENST00000625023 ALKQ9UM73 1620 aa12.79□□□□□ -0.36
AC002540.1-201ENST00000625023 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
AC002540.1-201ENST00000625023 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
AC002540.1-201ENST00000625023 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
AC002540.1-201ENST00000625023 RIMS2Q9UQ26 1411 aa12.78□□□□□ -0.36
AC002540.1-201ENST00000625023 CLTCL1P53675 1640 aa12.77□□□□□ -0.36
AC002540.1-201ENST00000625023 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.37
AC002540.1-201ENST00000625023 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.37
AC002540.1-201ENST00000625023 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
AC002540.1-201ENST00000625023 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
AC002540.1-201ENST00000625023 CHD2O14647 1828 aaKnown RBP12.73□□□□□ -0.37
AC002540.1-201ENST00000625023 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
AC002540.1-201ENST00000625023 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
AC002540.1-201ENST00000625023 KCNA6P17658 529 aa12.72□□□□□ -0.37
AC002540.1-201ENST00000625023 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.72□□□□□ -0.37
AC002540.1-201ENST00000625023 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
AC002540.1-201ENST00000625023 TBX22Q9Y458 520 aa12.72□□□□□ -0.37
AC002540.1-201ENST00000625023 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
AC002540.1-201ENST00000625023 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
AC002540.1-201ENST00000625023 HDGFP51858 240 aaKnown RBP12.71□□□□□ -0.37
AC002540.1-201ENST00000625023 KIF1BO60333 1816 aa12.71□□□□□ -0.38
AC002540.1-201ENST00000625023 DIP2AQ14689 1571 aa12.71□□□□□ -0.38
AC002540.1-201ENST00000625023 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
AC002540.1-201ENST00000625023 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
AC002540.1-201ENST00000625023 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
AC002540.1-201ENST00000625023 MPHOSPH9Q99550 1183 aa12.69□□□□□ -0.38
AC002540.1-201ENST00000625023 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
AC002540.1-201ENST00000625023 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
AC002540.1-201ENST00000625023 UBAP1LF5GYI3 381 aa12.68□□□□□ -0.38
AC002540.1-201ENST00000625023 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
AC002540.1-201ENST00000625023 SPATA31E1Q6ZUB1 1445 aa12.67□□□□□ -0.38
AC002540.1-201ENST00000625023 HRCP23327 699 aa12.67□□□□□ -0.38
AC002540.1-201ENST00000625023 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
AC002540.1-201ENST00000625023 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
AC002540.1-201ENST00000625023 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
AC002540.1-201ENST00000625023 SETD1AO15047 1707 aaKnown RBP12.66□□□□□ -0.38
AC002540.1-201ENST00000625023 PPLO60437 1756 aa12.66□□□□□ -0.38
AC002540.1-201ENST00000625023 TOM1O60784 492 aa12.65□□□□□ -0.38
AC002540.1-201ENST00000625023 NCOA3Q9Y6Q9 1424 aa12.65□□□□□ -0.38
AC002540.1-201ENST00000625023 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.39
AC002540.1-201ENST00000625023 PPP1R15AO75807 674 aaPredicted RBP12.64□□□□□ -0.39
AC002540.1-201ENST00000625023 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
AC002540.1-201ENST00000625023 METP08581 1390 aa12.63□□□□□ -0.39
AC002540.1-201ENST00000625023 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
AC002540.1-201ENST00000625023 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
AC002540.1-201ENST00000625023 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
AC002540.1-201ENST00000625023 CAPN15O75808 1086 aa12.61□□□□□ -0.39
AC002540.1-201ENST00000625023 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
AC002540.1-201ENST00000625023 PROSER2Q86WR7 435 aaPredicted RBP12.61□□□□□ -0.39
AC002540.1-201ENST00000625023 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
AC002540.1-201ENST00000625023 DSG3P32926 999 aa12.6□□□□□ -0.39
AC002540.1-201ENST00000625023 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
AC002540.1-201ENST00000625023 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
AC002540.1-201ENST00000625023 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
AC002540.1-201ENST00000625023 BCANQ96GW7 911 aa12.59□□□□□ -0.39
AC002540.1-201ENST00000625023 AMOTL2Q9Y2J4 779 aa12.59□□□□□ -0.39
AC002540.1-201ENST00000625023 HSPA1LP34931 641 aa12.58□□□□□ -0.4
AC002540.1-201ENST00000625023 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
AC002540.1-201ENST00000625023 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
AC002540.1-201ENST00000625023 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
AC002540.1-201ENST00000625023 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
AC002540.1-201ENST00000625023 MSH6P52701 1360 aa12.55□□□□□ -0.4
AC002540.1-201ENST00000625023 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
AC002540.1-201ENST00000625023 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
AC002540.1-201ENST00000625023 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
AC002540.1-201ENST00000625023 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
AC002540.1-201ENST00000625023 ROBO1Q9Y6N7 1651 aa12.55□□□□□ -0.4
AC002540.1-201ENST00000625023 DCCP43146 1447 aa12.54□□□□□ -0.4
AC002540.1-201ENST00000625023 ASXL1Q8IXJ9 1541 aa12.54□□□□□ -0.4
AC002540.1-201ENST00000625023 MYOM2P54296 1465 aa12.54□□□□□ -0.4
AC002540.1-201ENST00000625023 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
AC002540.1-201ENST00000625023 TECPR2O15040 1411 aa12.53□□□□□ -0.4
AC002540.1-201ENST00000625023 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
AC002540.1-201ENST00000625023 SLAIN2Q9P270 581 aa12.52□□□□□ -0.41
AC002540.1-201ENST00000625023 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.41
AC002540.1-201ENST00000625023 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
AC002540.1-201ENST00000625023 ADGRL3Q9HAR2 1447 aa12.51□□□□□ -0.41
AC002540.1-201ENST00000625023 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
AC002540.1-201ENST00000625023 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
AC002540.1-201ENST00000625023 FKBP8Q14318 412 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms