RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SPAG9O60271 1321 aaKnown RBP10.85□□□□□ -0.67
VCL-206ENST00000623461 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
VCL-206ENST00000623461 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
VCL-206ENST00000623461 HSP90B2PQ58FF3 399 aa10.84□□□□□ -0.67
VCL-206ENST00000623461 FAM184AQ8NB25 1140 aa10.84□□□□□ -0.67
VCL-206ENST00000623461 ROCK1Q13464 1354 aa10.84□□□□□ -0.67
VCL-206ENST00000623461 ZSCAN30Q86W11 494 aa10.83□□□□□ -0.67
VCL-206ENST00000623461 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.67
VCL-206ENST00000623461 NINLQ9Y2I6 1382 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 AK7Q96M32 723 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 CAVIN1Q6NZI2 390 aaKnown RBP10.83□□□□□ -0.68
VCL-206ENST00000623461 WASHC2AQ641Q2 1341 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 MIA2Q96PC5 1412 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 MCM4P33991 863 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 TPD52L1Q16890 204 aaPredicted RBP10.83□□□□□ -0.68
VCL-206ENST00000623461 CCP110O43303 1012 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
VCL-206ENST00000623461 ERCC4Q92889 916 aaPredicted RBP10.83□□□□□ -0.68
VCL-206ENST00000623461 TSPYL1Q9H0U9 437 aa10.83□□□□□ -0.68
VCL-206ENST00000623461 CWC22Q9HCG8 908 aaKnown RBP10.83□□□□□ -0.68
VCL-206ENST00000623461 APAF1O14727 1248 aa10.82□□□□□ -0.68
VCL-206ENST00000623461 CDC45O75419 566 aa10.82□□□□□ -0.68
VCL-206ENST00000623461 MCM2P49736 904 aa10.82□□□□□ -0.68
VCL-206ENST00000623461 TERF2IPQ9NYB0 399 aa10.82□□□□□ -0.68
VCL-206ENST00000623461 RILPL2Q969X0 211 aa10.82□□□□□ -0.68
VCL-206ENST00000623461 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
VCL-206ENST00000623461 TMX4Q9H1E5 349 aaPredicted RBP10.81□□□□□ -0.68
VCL-206ENST00000623461 PDE3AQ14432 1141 aa10.81□□□□□ -0.68
VCL-206ENST00000623461 FOXD4L6Q3SYB3 417 aaPredicted RBP10.81□□□□□ -0.68
VCL-206ENST00000623461 FOXD4L3Q6VB84 417 aaPredicted RBP10.81□□□□□ -0.68
VCL-206ENST00000623461 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
VCL-206ENST00000623461 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
VCL-206ENST00000623461 SMC3Q9UQE7 1217 aa10.8□□□□□ -0.68
VCL-206ENST00000623461 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
VCL-206ENST00000623461 API5Q9BZZ5 524 aaKnown RBP10.8□□□□□ -0.68
VCL-206ENST00000623461 RABEP1Q15276 862 aa10.8□□□□□ -0.68
VCL-206ENST00000623461 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
VCL-206ENST00000623461 BICD2Q8TD16 824 aa10.8□□□□□ -0.68
VCL-206ENST00000623461 RDXP35241 583 aaKnown RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 ZMYND15Q9H091 742 aa10.79□□□□□ -0.68
VCL-206ENST00000623461 HOOK1Q9UJC3 728 aaKnown RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 ZKSCAN1P17029 563 aaPredicted RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 KIF21BO75037 1637 aa10.79□□□□□ -0.68
VCL-206ENST00000623461 SENP3Q9H4L4 574 aaPredicted RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 RRP7AQ9Y3A4 280 aaKnown RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 CDR1P51861 262 aa10.79□□□□□ -0.68
VCL-206ENST00000623461 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
VCL-206ENST00000623461 SLC4A10Q6U841 1118 aa10.79□□□□□ -0.68
VCL-206ENST00000623461 RUNDC1Q96C34 613 aa10.79□□□□□ -0.68
VCL-206ENST00000623461 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
VCL-206ENST00000623461 RNF214Q8ND24 703 aa10.78□□□□□ -0.68
VCL-206ENST00000623461 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.78□□□□□ -0.68
VCL-206ENST00000623461 RUFY1Q96T51 708 aa10.78□□□□□ -0.68
VCL-206ENST00000623461 WASHC2CQ9Y4E1 1318 aa10.77□□□□□ -0.68
VCL-206ENST00000623461 FHOD3Q2V2M9 1422 aa10.77□□□□□ -0.68
VCL-206ENST00000623461 IPO7O95373 1038 aaKnown RBP10.77□□□□□ -0.68
VCL-206ENST00000623461 PRPF40AO75400 957 aaKnown RBP10.77□□□□□ -0.69
VCL-206ENST00000623461 RNF20Q5VTR2 975 aa10.77□□□□□ -0.69
VCL-206ENST00000623461 CUX1P39880 1505 aa10.77□□□□□ -0.69
VCL-206ENST00000623461 CCDC112Q8NEF3 446 aa10.77□□□□□ -0.69
VCL-206ENST00000623461 ANKRD20A12PQ8NF67 263 aa10.77□□□□□ -0.69
VCL-206ENST00000623461 PDZRN3Q9UPQ7 1066 aa10.76□□□□□ -0.69
VCL-206ENST00000623461 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
VCL-206ENST00000623461 RUSC2Q8N2Y8 1516 aa10.76□□□□□ -0.69
VCL-206ENST00000623461 K7ELQ4 463 aaPredicted RBP10.76□□□□□ -0.69
VCL-206ENST00000623461 LNPKQ9C0E8 428 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 TRIM5Q9C035 493 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 USP8P40818 1118 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 H0YHG0 523 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 MCM5P33992 734 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 CREBRFQ8IUR6 639 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 ANO2Q9NQ90 1003 aa10.75□□□□□ -0.69
VCL-206ENST00000623461 C11orf95C9JLR9 678 aaPredicted RBP10.74□□□□□ -0.69
VCL-206ENST00000623461 VPS37CA5D8V6 355 aaPredicted RBP10.74□□□□□ -0.69
VCL-206ENST00000623461 RASSF8Q8NHQ8 419 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 CLCN1P35523 988 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 CALCOCO1Q9P1Z2 691 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 CARMIL2Q6F5E8 1435 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 GCC1Q96CN9 775 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 CHMP3Q9Y3E7 222 aa10.73□□□□□ -0.69
VCL-206ENST00000623461 SAFB2Q14151 953 aaKnown RBP eCLIP10.72□□□□□ -0.69
VCL-206ENST00000623461 CPLX2Q6PUV4 134 aaKnown RBP10.72□□□□□ -0.69
VCL-206ENST00000623461 CCDC192P0DO97 292 aa10.72□□□□□ -0.69
VCL-206ENST00000623461 GORABQ5T7V8 394 aa10.72□□□□□ -0.69
VCL-206ENST00000623461 PNISRQ8TF01 805 aaKnown RBP10.72□□□□□ -0.69
VCL-206ENST00000623461 DEF6Q9H4E7 631 aa10.72□□□□□ -0.69
VCL-206ENST00000623461 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
VCL-206ENST00000623461 CEP89Q96ST8 783 aa10.72□□□□□ -0.69
VCL-206ENST00000623461 LRRC9Q6ZRR7 1453 aa10.72□□□□□ -0.69
VCL-206ENST00000623461 ERICH3Q5RHP9 1530 aa10.71□□□□□ -0.69
VCL-206ENST00000623461 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
VCL-206ENST00000623461 CCDC191Q8NCU4 936 aa10.71□□□□□ -0.69
VCL-206ENST00000623461 EIF3JO75822 258 aaKnown RBP10.71□□□□□ -0.69
VCL-206ENST00000623461 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms