RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 PPP1R15AO75807 674 aaPredicted RBP25.06■■□□□ 1.6
CD99-211ENST00000623253 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
CD99-211ENST00000623253 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
CD99-211ENST00000623253 RPRD2Q5VT52 1461 aaKnown RBP25.02■■□□□ 1.6
CD99-211ENST00000623253 MSH6P52701 1360 aa25.02■■□□□ 1.6
CD99-211ENST00000623253 NKTRP30414 1462 aaKnown RBP25.01■■□□□ 1.59
CD99-211ENST00000623253 ROBO1Q9Y6N7 1651 aa25.01■■□□□ 1.59
CD99-211ENST00000623253 SLAIN2Q9P270 581 aa24.99■■□□□ 1.59
CD99-211ENST00000623253 RIMS2Q9UQ26 1411 aa24.99■■□□□ 1.59
CD99-211ENST00000623253 PLEKHG1Q9ULL1 1385 aa24.98■■□□□ 1.59
CD99-211ENST00000623253 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
CD99-211ENST00000623253 ZFYVE9O95405 1425 aa24.96■■□□□ 1.59
CD99-211ENST00000623253 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
CD99-211ENST00000623253 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
CD99-211ENST00000623253 POTEAQ6S8J7 498 aa24.95■■□□□ 1.58
CD99-211ENST00000623253 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
CD99-211ENST00000623253 GCC2Q8IWJ2 1684 aa24.93■■□□□ 1.58
CD99-211ENST00000623253 MYO5BQ9ULV0 1848 aa24.92■■□□□ 1.58
CD99-211ENST00000623253 TBX22Q9Y458 520 aa24.92■■□□□ 1.58
CD99-211ENST00000623253 TMEM131LA2VDJ0 1609 aa24.91■■□□□ 1.58
CD99-211ENST00000623253 ITGAEP38570 1179 aa24.9■■□□□ 1.58
CD99-211ENST00000623253 UNC13BO14795 1591 aa24.88■■□□□ 1.57
CD99-211ENST00000623253 CHD2O14647 1828 aaKnown RBP24.87■■□□□ 1.57
CD99-211ENST00000623253 JCADQ9P266 1359 aa24.87■■□□□ 1.57
CD99-211ENST00000623253 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
CD99-211ENST00000623253 NUP155O75694 1391 aa24.84■■□□□ 1.57
CD99-211ENST00000623253 E9PCH4 1651 aa24.84■■□□□ 1.57
CD99-211ENST00000623253 ROCK1Q13464 1354 aa24.83■■□□□ 1.57
CD99-211ENST00000623253 ATF3P18847 181 aa24.83■■□□□ 1.57
CD99-211ENST00000623253 ADAMTS13Q76LX8 1427 aa24.83■■□□□ 1.57
CD99-211ENST00000623253 NCOA3Q9Y6Q9 1424 aa24.81■■□□□ 1.56
CD99-211ENST00000623253 CADPS2Q86UW7 1296 aa24.81■■□□□ 1.56
CD99-211ENST00000623253 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
CD99-211ENST00000623253 AMOTL2Q9Y2J4 779 aa24.8■■□□□ 1.56
CD99-211ENST00000623253 PPARGC1BQ86YN6 1023 aaKnown RBP24.79■■□□□ 1.56
CD99-211ENST00000623253 IQGAP3Q86VI3 1631 aa24.79■■□□□ 1.56
CD99-211ENST00000623253 MEX3CQ5U5Q3 659 aaKnown RBP24.78■■□□□ 1.56
CD99-211ENST00000623253 PIK3R4Q99570 1358 aa24.78■■□□□ 1.56
CD99-211ENST00000623253 DIP2AQ14689 1571 aa24.76■■□□□ 1.55
CD99-211ENST00000623253 COL16A1Q07092 1604 aaPredicted RBP24.75■■□□□ 1.55
CD99-211ENST00000623253 ZNF326Q5BKZ1 582 aaKnown RBP24.74■■□□□ 1.55
CD99-211ENST00000623253 SPATA31A6Q5VVP1 1343 aa24.74■■□□□ 1.55
CD99-211ENST00000623253 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.74■■□□□ 1.55
CD99-211ENST00000623253 TRPM2O94759 1503 aa24.73■■□□□ 1.55
CD99-211ENST00000623253 PTPRUQ92729 1446 aa24.71■■□□□ 1.55
CD99-211ENST00000623253 LRP6O75581 1613 aa24.7■■□□□ 1.54
CD99-211ENST00000623253 BRINP3Q76B58 766 aa24.69■■□□□ 1.54
CD99-211ENST00000623253 NUTM2BA6NNL0 878 aaPredicted RBP24.68■■□□□ 1.54
CD99-211ENST00000623253 NUTM2EB1AL46 878 aaPredicted RBP24.68■■□□□ 1.54
CD99-211ENST00000623253 ZNF772Q68DY9 489 aaPredicted RBP24.68■■□□□ 1.54
CD99-211ENST00000623253 NUTM2AQ8IVF1 878 aaPredicted RBP24.68■■□□□ 1.54
CD99-211ENST00000623253 SETD1AO15047 1707 aaKnown RBP24.67■■□□□ 1.54
CD99-211ENST00000623253 AHDC1Q5TGY3 1603 aaPredicted RBP24.67■■□□□ 1.54
CD99-211ENST00000623253 TRIM52Q96A61 297 aa24.66■■□□□ 1.54
CD99-211ENST00000623253 METP08581 1390 aa24.62■■□□□ 1.53
CD99-211ENST00000623253 SPHKAPQ2M3C7 1700 aa24.61■■□□□ 1.53
CD99-211ENST00000623253 DCCP43146 1447 aa24.61■■□□□ 1.53
CD99-211ENST00000623253 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
CD99-211ENST00000623253 SETBP1Q9Y6X0 1596 aa24.6■■□□□ 1.53
CD99-211ENST00000623253 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
CD99-211ENST00000623253 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
CD99-211ENST00000623253 RXRBP28702 533 aa24.58■■□□□ 1.53
CD99-211ENST00000623253 MST1RQ04912 1400 aa24.58■■□□□ 1.53
CD99-211ENST00000623253 XRN1Q8IZH2 1706 aaKnown RBP24.58■■□□□ 1.52
CD99-211ENST00000623253 LRRC59Q96AG4 307 aaKnown RBP24.56■■□□□ 1.52
CD99-211ENST00000623253 DDX17Q92841 729 aaKnown RBP24.55■■□□□ 1.52
CD99-211ENST00000623253 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
CD99-211ENST00000623253 AFF2P51816 1311 aa24.54■■□□□ 1.52
CD99-211ENST00000623253 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
CD99-211ENST00000623253 CLTCL1P53675 1640 aa24.52■■□□□ 1.52
CD99-211ENST00000623253 ADGRL3Q9HAR2 1447 aa24.52■■□□□ 1.52
CD99-211ENST00000623253 C8orf37Q96NL8 207 aa24.51■■□□□ 1.51
CD99-211ENST00000623253 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
CD99-211ENST00000623253 NHSL1Q5SYE7 1610 aa24.47■■□□□ 1.51
CD99-211ENST00000623253 VGFO15240 615 aaPredicted RBP24.47■■□□□ 1.51
CD99-211ENST00000623253 NAIPQ13075 1403 aa24.46■■□□□ 1.51
CD99-211ENST00000623253 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.5
CD99-211ENST00000623253 NALCNQ8IZF0 1738 aa24.44■■□□□ 1.5
CD99-211ENST00000623253 ADAMTS2O95450 1211 aa24.44■■□□□ 1.5
CD99-211ENST00000623253 QTRT2Q9H974 415 aaKnown RBP24.44■■□□□ 1.5
CD99-211ENST00000623253 KIF1BO60333 1816 aa24.44■■□□□ 1.5
CD99-211ENST00000623253 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
CD99-211ENST00000623253 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
CD99-211ENST00000623253 C1orf167Q5SNV9 1468 aa24.42■■□□□ 1.5
CD99-211ENST00000623253 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
CD99-211ENST00000623253 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
CD99-211ENST00000623253 CDK12Q9NYV4 1490 aaPredicted RBP24.41■■□□□ 1.5
CD99-211ENST00000623253 SLC4A1APQ9BWU0 796 aaKnown RBP24.41■■□□□ 1.5
CD99-211ENST00000623253 RBM6P78332 1123 aaKnown RBP24.39■■□□□ 1.49
CD99-211ENST00000623253 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
CD99-211ENST00000623253 PTCH1Q13635 1447 aa24.38■■□□□ 1.49
CD99-211ENST00000623253 RGS12O14924 1447 aa24.35■■□□□ 1.49
CD99-211ENST00000623253 SOS2Q07890 1332 aaPredicted RBP24.35■■□□□ 1.49
CD99-211ENST00000623253 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
CD99-211ENST00000623253 FOXD1Q16676 465 aa24.32■■□□□ 1.48
CD99-211ENST00000623253 USP21Q9UK80 565 aa24.32■■□□□ 1.48
CD99-211ENST00000623253 ESCO1Q5FWF5 840 aa24.31■■□□□ 1.48
CD99-211ENST00000623253 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
CD99-211ENST00000623253 STK26Q9P289 416 aa24.28■■□□□ 1.48
CD99-211ENST00000623253 TRPC5Q9UL62 973 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms