RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
ABCB1-211ENST00000622132 YEATS2Q9ULM3 1422 aa11.3□□□□□ -0.6
ABCB1-211ENST00000622132 COG3Q96JB2 828 aa11.3□□□□□ -0.6
ABCB1-211ENST00000622132 AMPHP49418 695 aa11.29□□□□□ -0.6
ABCB1-211ENST00000622132 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
ABCB1-211ENST00000622132 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
ABCB1-211ENST00000622132 ADCY10Q96PN6 1610 aa11.29□□□□□ -0.6
ABCB1-211ENST00000622132 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
ABCB1-211ENST00000622132 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
ABCB1-211ENST00000622132 NOS1P29475 1434 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 RIMBP3CA6NJZ7 1639 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 RIMBP3BA6NNM3 1639 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 RIMBP3Q9UFD9 1639 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 SAMD9LQ8IVG5 1584 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
ABCB1-211ENST00000622132 WASHC2AQ641Q2 1341 aa11.27□□□□□ -0.6
ABCB1-211ENST00000622132 ARHGEF5Q12774 1597 aa11.27□□□□□ -0.6
ABCB1-211ENST00000622132 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
ABCB1-211ENST00000622132 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.61
ABCB1-211ENST00000622132 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
ABCB1-211ENST00000622132 CDK19Q9BWU1 502 aa11.26□□□□□ -0.61
ABCB1-211ENST00000622132 FKBP8Q14318 412 aa11.26□□□□□ -0.61
ABCB1-211ENST00000622132 LTV1Q96GA3 475 aaPredicted RBP11.26□□□□□ -0.61
ABCB1-211ENST00000622132 ABCC1P33527 1531 aa11.26□□□□□ -0.61
ABCB1-211ENST00000622132 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
ABCB1-211ENST00000622132 WAPLQ7Z5K2 1190 aa11.25□□□□□ -0.61
ABCB1-211ENST00000622132 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
ABCB1-211ENST00000622132 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
ABCB1-211ENST00000622132 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
ABCB1-211ENST00000622132 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
ABCB1-211ENST00000622132 AMOTL2Q9Y2J4 779 aa11.25□□□□□ -0.61
ABCB1-211ENST00000622132 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
ABCB1-211ENST00000622132 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
ABCB1-211ENST00000622132 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
ABCB1-211ENST00000622132 MLH3Q9UHC1 1453 aa11.24□□□□□ -0.61
ABCB1-211ENST00000622132 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
ABCB1-211ENST00000622132 PZPP20742 1482 aa11.24□□□□□ -0.61
ABCB1-211ENST00000622132 GGNBP2Q9H3C7 697 aa11.24□□□□□ -0.61
ABCB1-211ENST00000622132 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
ABCB1-211ENST00000622132 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
ABCB1-211ENST00000622132 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
ABCB1-211ENST00000622132 MAGI2Q86UL8 1455 aa11.23□□□□□ -0.61
ABCB1-211ENST00000622132 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
ABCB1-211ENST00000622132 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
ABCB1-211ENST00000622132 NLRP6P59044 892 aa11.21□□□□□ -0.61
ABCB1-211ENST00000622132 NUTM2GQ5VZR2 741 aa11.21□□□□□ -0.61
ABCB1-211ENST00000622132 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.62
ABCB1-211ENST00000622132 GPRASP1Q5JY77 1395 aa11.21□□□□□ -0.62
ABCB1-211ENST00000622132 HSPA2P54652 639 aa11.2□□□□□ -0.62
ABCB1-211ENST00000622132 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
ABCB1-211ENST00000622132 ARAP3Q8WWN8 1544 aa11.2□□□□□ -0.62
ABCB1-211ENST00000622132 RIMS2Q9UQ26 1411 aa11.2□□□□□ -0.62
ABCB1-211ENST00000622132 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
ABCB1-211ENST00000622132 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
ABCB1-211ENST00000622132 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
ABCB1-211ENST00000622132 ARXQ96QS3 562 aa11.19□□□□□ -0.62
ABCB1-211ENST00000622132 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
ABCB1-211ENST00000622132 ABTB2Q8N961 1025 aa11.19□□□□□ -0.62
ABCB1-211ENST00000622132 CCDC146Q8IYE0 955 aa11.19□□□□□ -0.62
ABCB1-211ENST00000622132 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
ABCB1-211ENST00000622132 NUDT16Q96DE0 195 aaKnown RBP11.19□□□□□ -0.62
ABCB1-211ENST00000622132 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
ABCB1-211ENST00000622132 CDC42BPAQ5VT25 1732 aa11.18□□□□□ -0.62
ABCB1-211ENST00000622132 MAST1Q9Y2H9 1570 aa11.17□□□□□ -0.62
ABCB1-211ENST00000622132 NPATQ14207 1427 aa11.17□□□□□ -0.62
ABCB1-211ENST00000622132 EVA1CP58658 441 aa11.16□□□□□ -0.62
ABCB1-211ENST00000622132 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
ABCB1-211ENST00000622132 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
ABCB1-211ENST00000622132 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
ABCB1-211ENST00000622132 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
ABCB1-211ENST00000622132 ADGBQ8N7X0 1667 aa11.16□□□□□ -0.62
ABCB1-211ENST00000622132 SUPT16HQ9Y5B9 1047 aaKnown RBP11.15□□□□□ -0.62
ABCB1-211ENST00000622132 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
ABCB1-211ENST00000622132 PKNOX2Q96KN3 472 aa11.15□□□□□ -0.62
ABCB1-211ENST00000622132 CALD1Q05682 793 aaKnown RBP11.15□□□□□ -0.63
ABCB1-211ENST00000622132 PRAG1Q86YV5 1406 aa11.14□□□□□ -0.63
ABCB1-211ENST00000622132 FRAT1Q92837 279 aaPredicted RBP11.14□□□□□ -0.63
ABCB1-211ENST00000622132 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
ABCB1-211ENST00000622132 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
ABCB1-211ENST00000622132 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
ABCB1-211ENST00000622132 MTHFSP49914 203 aa11.13□□□□□ -0.63
ABCB1-211ENST00000622132 XPCQ01831 940 aaPredicted RBP11.13□□□□□ -0.63
ABCB1-211ENST00000622132 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
ABCB1-211ENST00000622132 CFAP65Q6ZU64 1925 aaKnown RBP11.13□□□□□ -0.63
ABCB1-211ENST00000622132 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
ABCB1-211ENST00000622132 GCC2Q8IWJ2 1684 aa11.12□□□□□ -0.63
ABCB1-211ENST00000622132 PIP4K2BP78356 416 aa11.12□□□□□ -0.63
ABCB1-211ENST00000622132 KDM6BO15054 1643 aa11.12□□□□□ -0.63
ABCB1-211ENST00000622132 TBX22Q9Y458 520 aa11.11□□□□□ -0.63
ABCB1-211ENST00000622132 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
ABCB1-211ENST00000622132 FOXO3O43524 673 aa11.11□□□□□ -0.63
ABCB1-211ENST00000622132 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
ABCB1-211ENST00000622132 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
ABCB1-211ENST00000622132 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
ABCB1-211ENST00000622132 CDC42BPBQ9Y5S2 1711 aa11.1□□□□□ -0.63
ABCB1-211ENST00000622132 APAF1O14727 1248 aa11.09□□□□□ -0.63
ABCB1-211ENST00000622132 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
ABCB1-211ENST00000622132 RALGAPBQ86X10 1494 aa11.09□□□□□ -0.63
ABCB1-211ENST00000622132 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms