RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 GCC2Q8IWJ2 1684 aa26.13■■□□□ 1.77
TARDBP-225ENST00000621715 FAM50AQ14320 339 aaKnown RBP26.13■■□□□ 1.77
TARDBP-225ENST00000621715 PROSER2Q86WR7 435 aaPredicted RBP26.11■■□□□ 1.77
TARDBP-225ENST00000621715 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
TARDBP-225ENST00000621715 NKTRP30414 1462 aaKnown RBP26.1■■□□□ 1.77
TARDBP-225ENST00000621715 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
TARDBP-225ENST00000621715 SLC52A1Q9NWF4 448 aa26.09■■□□□ 1.77
TARDBP-225ENST00000621715 CHD2O14647 1828 aaKnown RBP26.08■■□□□ 1.77
TARDBP-225ENST00000621715 UNC13BO14795 1591 aa26.07■■□□□ 1.76
TARDBP-225ENST00000621715 E9PCH4 1651 aa26.05■■□□□ 1.76
TARDBP-225ENST00000621715 RIMS2Q9UQ26 1411 aa26.05■■□□□ 1.76
TARDBP-225ENST00000621715 PLEKHG1Q9ULL1 1385 aa26.04■■□□□ 1.76
TARDBP-225ENST00000621715 POTEAQ6S8J7 498 aa26.03■■□□□ 1.76
TARDBP-225ENST00000621715 BCANQ96GW7 911 aa26.02■■□□□ 1.76
TARDBP-225ENST00000621715 NUTM2DQ5VT03 806 aaPredicted RBP25.99■■□□□ 1.75
TARDBP-225ENST00000621715 PHLPP1O60346 1717 aa25.99■■□□□ 1.75
TARDBP-225ENST00000621715 ADAMTS13Q76LX8 1427 aa25.98■■□□□ 1.75
TARDBP-225ENST00000621715 MSH6P52701 1360 aa25.98■■□□□ 1.75
TARDBP-225ENST00000621715 SLAIN2Q9P270 581 aa25.97■■□□□ 1.75
TARDBP-225ENST00000621715 IQGAP3Q86VI3 1631 aa25.96■■□□□ 1.75
TARDBP-225ENST00000621715 PPP1R15AO75807 674 aaPredicted RBP25.94■■□□□ 1.74
TARDBP-225ENST00000621715 COL16A1Q07092 1604 aaPredicted RBP25.94■■□□□ 1.74
TARDBP-225ENST00000621715 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
TARDBP-225ENST00000621715 TBX22Q9Y458 520 aa25.92■■□□□ 1.74
TARDBP-225ENST00000621715 SETD1AO15047 1707 aaKnown RBP25.9■■□□□ 1.74
TARDBP-225ENST00000621715 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.9■■□□□ 1.74
TARDBP-225ENST00000621715 ROCK1Q13464 1354 aa25.9■■□□□ 1.74
TARDBP-225ENST00000621715 PTPRUQ92729 1446 aa25.88■■□□□ 1.73
TARDBP-225ENST00000621715 LRP6O75581 1613 aa25.87■■□□□ 1.73
TARDBP-225ENST00000621715 DIP2AQ14689 1571 aa25.86■■□□□ 1.73
TARDBP-225ENST00000621715 JCADQ9P266 1359 aa25.86■■□□□ 1.73
TARDBP-225ENST00000621715 NRXN3Q9Y4C0 1643 aa25.85■■□□□ 1.73
TARDBP-225ENST00000621715 HDGFP51858 240 aaKnown RBP25.84■■□□□ 1.73
TARDBP-225ENST00000621715 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.84■■□□□ 1.73
TARDBP-225ENST00000621715 NUP155O75694 1391 aa25.83■■□□□ 1.73
TARDBP-225ENST00000621715 NCOA3Q9Y6Q9 1424 aa25.83■■□□□ 1.73
TARDBP-225ENST00000621715 ITGAEP38570 1179 aa25.82■■□□□ 1.72
TARDBP-225ENST00000621715 PPARGC1BQ86YN6 1023 aaKnown RBP25.81■■□□□ 1.72
TARDBP-225ENST00000621715 AHDC1Q5TGY3 1603 aaPredicted RBP25.81■■□□□ 1.72
TARDBP-225ENST00000621715 PIK3R4Q99570 1358 aa25.8■■□□□ 1.72
TARDBP-225ENST00000621715 TRPM2O94759 1503 aa25.79■■□□□ 1.72
TARDBP-225ENST00000621715 C14orf37Q86TY3 774 aa25.79■■□□□ 1.72
TARDBP-225ENST00000621715 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
TARDBP-225ENST00000621715 XRN1Q8IZH2 1706 aaKnown RBP25.78■■□□□ 1.72
TARDBP-225ENST00000621715 AMOTL2Q9Y2J4 779 aa25.78■■□□□ 1.72
TARDBP-225ENST00000621715 C19orf44Q9H6X5 657 aa25.77■■□□□ 1.72
TARDBP-225ENST00000621715 SHPRHQ149N8 1683 aa25.76■■□□□ 1.71
TARDBP-225ENST00000621715 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
TARDBP-225ENST00000621715 CADPS2Q86UW7 1296 aa25.74■■□□□ 1.71
TARDBP-225ENST00000621715 BRINP3Q76B58 766 aa25.73■■□□□ 1.71
TARDBP-225ENST00000621715 METP08581 1390 aa25.72■■□□□ 1.71
TARDBP-225ENST00000621715 ATF3P18847 181 aa25.72■■□□□ 1.71
TARDBP-225ENST00000621715 CLTCL1P53675 1640 aa25.7■■□□□ 1.71
TARDBP-225ENST00000621715 SPATA31A6Q5VVP1 1343 aa25.7■■□□□ 1.71
TARDBP-225ENST00000621715 ASXL1Q8IXJ9 1541 aa25.68■■□□□ 1.7
TARDBP-225ENST00000621715 MST1RQ04912 1400 aa25.67■■□□□ 1.7
TARDBP-225ENST00000621715 NEXMIFQ5QGS0 1516 aa25.67■■□□□ 1.7
TARDBP-225ENST00000621715 DCCP43146 1447 aa25.65■■□□□ 1.7
TARDBP-225ENST00000621715 NHSL1Q5SYE7 1610 aa25.65■■□□□ 1.7
TARDBP-225ENST00000621715 NALCNQ8IZF0 1738 aa25.64■■□□□ 1.7
TARDBP-225ENST00000621715 MEX3CQ5U5Q3 659 aaKnown RBP25.63■■□□□ 1.69
TARDBP-225ENST00000621715 ZNF326Q5BKZ1 582 aaKnown RBP25.62■■□□□ 1.69
TARDBP-225ENST00000621715 DDX17Q92841 729 aaKnown RBP25.62■■□□□ 1.69
TARDBP-225ENST00000621715 NUTM2BA6NNL0 878 aaPredicted RBP25.6■■□□□ 1.69
TARDBP-225ENST00000621715 NUTM2EB1AL46 878 aaPredicted RBP25.6■■□□□ 1.69
TARDBP-225ENST00000621715 NUTM2AQ8IVF1 878 aaPredicted RBP25.6■■□□□ 1.69
TARDBP-225ENST00000621715 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
TARDBP-225ENST00000621715 SETD5Q9C0A6 1442 aa25.59■■□□□ 1.69
TARDBP-225ENST00000621715 ADGRL3Q9HAR2 1447 aa25.58■■□□□ 1.69
TARDBP-225ENST00000621715 NAIPQ13075 1403 aa25.57■■□□□ 1.68
TARDBP-225ENST00000621715 ZNF772Q68DY9 489 aaPredicted RBP25.57■■□□□ 1.68
TARDBP-225ENST00000621715 KIF1BO60333 1816 aa25.56■■□□□ 1.68
TARDBP-225ENST00000621715 UPF1Q92900 1129 aaKnown RBP eCLIP25.55■■□□□ 1.682e-11■■■□□ 15.1
TARDBP-225ENST00000621715 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
TARDBP-225ENST00000621715 AFF2P51816 1311 aa25.52■■□□□ 1.68
TARDBP-225ENST00000621715 PNPLA6Q8IY17 1366 aa25.51■■□□□ 1.67
TARDBP-225ENST00000621715 ROBO2Q9HCK4 1378 aa25.5■■□□□ 1.67
TARDBP-225ENST00000621715 RXRBP28702 533 aa25.49■■□□□ 1.67
TARDBP-225ENST00000621715 C1orf167Q5SNV9 1468 aa25.48■■□□□ 1.67
TARDBP-225ENST00000621715 LAMC1P11047 1609 aa25.47■■□□□ 1.67
TARDBP-225ENST00000621715 LRRC59Q96AG4 307 aaKnown RBP25.46■■□□□ 1.67
TARDBP-225ENST00000621715 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
TARDBP-225ENST00000621715 CDK12Q9NYV4 1490 aaPredicted RBP25.45■■□□□ 1.66
TARDBP-225ENST00000621715 PPLO60437 1756 aa25.44■■□□□ 1.66
TARDBP-225ENST00000621715 C8orf37Q96NL8 207 aa25.44■■□□□ 1.66
TARDBP-225ENST00000621715 ORAI2Q96SN7 254 aa25.43■■□□□ 1.66
TARDBP-225ENST00000621715 RGS12O14924 1447 aa25.43■■□□□ 1.66
TARDBP-225ENST00000621715 PRAG1Q86YV5 1406 aa25.41■■□□□ 1.66
TARDBP-225ENST00000621715 HFM1A2PYH4 1435 aa25.4■■□□□ 1.66
TARDBP-225ENST00000621715 SRCAPQ6ZRS2 3230 aa25.39■■□□□ 1.65
TARDBP-225ENST00000621715 ADAMTS2O95450 1211 aa25.38■■□□□ 1.65
TARDBP-225ENST00000621715 SOS2Q07890 1332 aaPredicted RBP25.37■■□□□ 1.65
TARDBP-225ENST00000621715 VGFO15240 615 aaPredicted RBP25.37■■□□□ 1.65
TARDBP-225ENST00000621715 FOXD1Q16676 465 aa25.37■■□□□ 1.65
TARDBP-225ENST00000621715 QTRT2Q9H974 415 aaKnown RBP25.37■■□□□ 1.65
TARDBP-225ENST00000621715 SLC4A1APQ9BWU0 796 aaKnown RBP25.34■■□□□ 1.65
TARDBP-225ENST00000621715 EP400Q96L91 3159 aa25.33■■□□□ 1.65
TARDBP-225ENST00000621715 RBM6P78332 1123 aaKnown RBP25.32■■□□□ 1.64
TARDBP-225ENST00000621715 RPGRIP1LQ68CZ1 1315 aa25.32■■□□□ 1.64
TARDBP-225ENST00000621715 COL22A1Q8NFW1 1626 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms