RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TESK2Q96S53 571 aa13.54□□□□□ -0.24
VTA1-205ENST00000620996 KIF1BO60333 1816 aa13.54□□□□□ -0.24
VTA1-205ENST00000620996 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
VTA1-205ENST00000620996 FBXO31Q5XUX0 539 aaPredicted RBP13.54□□□□□ -0.24
VTA1-205ENST00000620996 CC2D1BQ5T0F9 858 aaKnown RBP13.53□□□□□ -0.24
VTA1-205ENST00000620996 IDI1Q13907 227 aa13.52□□□□□ -0.24
VTA1-205ENST00000620996 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.24
VTA1-205ENST00000620996 TRAK1Q9UPV9 953 aa13.52□□□□□ -0.24
VTA1-205ENST00000620996 CAMSAP1Q5T5Y3 1602 aa13.52□□□□□ -0.24
VTA1-205ENST00000620996 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.24
VTA1-205ENST00000620996 PANK3Q9H999 370 aa13.52□□□□□ -0.24
VTA1-205ENST00000620996 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
VTA1-205ENST00000620996 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
VTA1-205ENST00000620996 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
VTA1-205ENST00000620996 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
VTA1-205ENST00000620996 COL17A1Q9UMD9 1497 aaPredicted RBP13.5□□□□□ -0.25
VTA1-205ENST00000620996 ZMYM4Q5VZL5 1548 aa13.48□□□□□ -0.25
VTA1-205ENST00000620996 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
VTA1-205ENST00000620996 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
VTA1-205ENST00000620996 LAMC1P11047 1609 aa13.48□□□□□ -0.25
VTA1-205ENST00000620996 KTN1Q86UP2 1357 aaKnown RBP13.48□□□□□ -0.25
VTA1-205ENST00000620996 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
VTA1-205ENST00000620996 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
VTA1-205ENST00000620996 STK26Q9P289 416 aa13.47□□□□□ -0.25
VTA1-205ENST00000620996 MYOM2P54296 1465 aa13.47□□□□□ -0.25
VTA1-205ENST00000620996 SLC52A1Q9NWF4 448 aa13.47□□□□□ -0.25
VTA1-205ENST00000620996 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
VTA1-205ENST00000620996 SIGLEC1Q9BZZ2 1709 aa13.46□□□□□ -0.26
VTA1-205ENST00000620996 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.26
VTA1-205ENST00000620996 SYNMO15061 1565 aa13.45□□□□□ -0.26
VTA1-205ENST00000620996 BCANQ96GW7 911 aa13.45□□□□□ -0.26
VTA1-205ENST00000620996 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
VTA1-205ENST00000620996 NEFLP07196 543 aa13.45□□□□□ -0.26
VTA1-205ENST00000620996 RALBP1Q15311 655 aa13.45□□□□□ -0.26
VTA1-205ENST00000620996 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
VTA1-205ENST00000620996 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
VTA1-205ENST00000620996 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
VTA1-205ENST00000620996 C14orf93Q9H972 538 aaKnown RBP13.44□□□□□ -0.26
VTA1-205ENST00000620996 ZC3H13Q5T200 1668 aaKnown RBP13.43□□□□□ -0.26
VTA1-205ENST00000620996 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
VTA1-205ENST00000620996 FKBP8Q14318 412 aa13.42□□□□□ -0.26
VTA1-205ENST00000620996 PIK3C2GO75747 1445 aa13.41□□□□□ -0.26
VTA1-205ENST00000620996 NEURL4Q96JN8 1562 aa13.41□□□□□ -0.26
VTA1-205ENST00000620996 SALL2Q9Y467 1007 aaPredicted RBP13.41□□□□□ -0.26
VTA1-205ENST00000620996 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
VTA1-205ENST00000620996 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
VTA1-205ENST00000620996 SUPT16HQ9Y5B9 1047 aaKnown RBP13.4□□□□□ -0.26
VTA1-205ENST00000620996 ERVK-7P63135 1459 aa13.39□□□□□ -0.27
VTA1-205ENST00000620996 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
VTA1-205ENST00000620996 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
VTA1-205ENST00000620996 PREX1Q8TCU6 1659 aa13.39□□□□□ -0.27
VTA1-205ENST00000620996 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
VTA1-205ENST00000620996 PPLO60437 1756 aa13.39□□□□□ -0.27
VTA1-205ENST00000620996 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
VTA1-205ENST00000620996 NRXN1Q9ULB1 1477 aa13.38□□□□□ -0.27
VTA1-205ENST00000620996 KIAA1210Q9ULL0 1709 aa13.38□□□□□ -0.27
VTA1-205ENST00000620996 POGKQ9P215 609 aa13.37□□□□□ -0.27
VTA1-205ENST00000620996 PIK3C2BO00750 1634 aa13.37□□□□□ -0.27
VTA1-205ENST00000620996 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
VTA1-205ENST00000620996 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
VTA1-205ENST00000620996 AGLP35573 1532 aa13.37□□□□□ -0.27
VTA1-205ENST00000620996 IRX6P78412 446 aaPredicted RBP13.37□□□□□ -0.27
VTA1-205ENST00000620996 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
VTA1-205ENST00000620996 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
VTA1-205ENST00000620996 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
VTA1-205ENST00000620996 PARD3Q8TEW0 1356 aa13.35□□□□□ -0.27
VTA1-205ENST00000620996 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
VTA1-205ENST00000620996 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
VTA1-205ENST00000620996 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
VTA1-205ENST00000620996 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
VTA1-205ENST00000620996 REREQ9P2R6 1566 aa13.34□□□□□ -0.27
VTA1-205ENST00000620996 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
VTA1-205ENST00000620996 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.27
VTA1-205ENST00000620996 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.27
VTA1-205ENST00000620996 CABP2Q9NPB3 220 aa13.33□□□□□ -0.27
VTA1-205ENST00000620996 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
VTA1-205ENST00000620996 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
VTA1-205ENST00000620996 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
VTA1-205ENST00000620996 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
VTA1-205ENST00000620996 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
VTA1-205ENST00000620996 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
VTA1-205ENST00000620996 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
VTA1-205ENST00000620996 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
VTA1-205ENST00000620996 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
VTA1-205ENST00000620996 TNRQ92752 1358 aa13.3□□□□□ -0.28
VTA1-205ENST00000620996 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
VTA1-205ENST00000620996 WDR43Q15061 677 aaKnown RBP eCLIP13.3□□□□□ -0.28
VTA1-205ENST00000620996 CARD14Q9BXL6 1004 aa13.29□□□□□ -0.28
VTA1-205ENST00000620996 QRICH2Q9H0J4 1663 aa13.29□□□□□ -0.28
VTA1-205ENST00000620996 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
VTA1-205ENST00000620996 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
VTA1-205ENST00000620996 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.28
VTA1-205ENST00000620996 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
VTA1-205ENST00000620996 SPATA31D1Q6ZQQ2 1576 aa13.27□□□□□ -0.29
VTA1-205ENST00000620996 ZFYVE9O95405 1425 aa13.27□□□□□ -0.29
VTA1-205ENST00000620996 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
VTA1-205ENST00000620996 WAPLQ7Z5K2 1190 aa13.27□□□□□ -0.29
VTA1-205ENST00000620996 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
VTA1-205ENST00000620996 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
VTA1-205ENST00000620996 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms