RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 ADGRB3O60242 1522 aa19.77■□□□□ 0.76
MUC1-229ENST00000620770 UBAP1LF5GYI3 381 aa19.76■□□□□ 0.75
MUC1-229ENST00000620770 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
MUC1-229ENST00000620770 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
MUC1-229ENST00000620770 TMEM131LA2VDJ0 1609 aa19.72■□□□□ 0.75
MUC1-229ENST00000620770 MYO5BQ9ULV0 1848 aa19.7■□□□□ 0.74
MUC1-229ENST00000620770 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
MUC1-229ENST00000620770 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
MUC1-229ENST00000620770 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
MUC1-229ENST00000620770 KIF1BO60333 1816 aa19.69■□□□□ 0.74
MUC1-229ENST00000620770 TXNDC2Q86VQ3 553 aa19.68■□□□□ 0.74
MUC1-229ENST00000620770 LTKP29376 864 aa19.66■□□□□ 0.74
MUC1-229ENST00000620770 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
MUC1-229ENST00000620770 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
MUC1-229ENST00000620770 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
MUC1-229ENST00000620770 LRRC7Q96NW7 1537 aa19.66■□□□□ 0.74
MUC1-229ENST00000620770 TOM1O60784 492 aa19.65■□□□□ 0.74
MUC1-229ENST00000620770 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
MUC1-229ENST00000620770 NUTM2DQ5VT03 806 aaPredicted RBP19.65■□□□□ 0.74
MUC1-229ENST00000620770 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
MUC1-229ENST00000620770 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
MUC1-229ENST00000620770 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
MUC1-229ENST00000620770 DISP3Q9P2K9 1392 aa19.64■□□□□ 0.73
MUC1-229ENST00000620770 SPATA31E1Q6ZUB1 1445 aa19.64■□□□□ 0.73
MUC1-229ENST00000620770 PPP1R15AO75807 674 aaPredicted RBP19.62■□□□□ 0.73
MUC1-229ENST00000620770 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
MUC1-229ENST00000620770 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
MUC1-229ENST00000620770 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
MUC1-229ENST00000620770 ALKQ9UM73 1620 aa19.6■□□□□ 0.73
MUC1-229ENST00000620770 NEXMIFQ5QGS0 1516 aa19.59■□□□□ 0.73
MUC1-229ENST00000620770 BCANQ96GW7 911 aa19.57■□□□□ 0.72
MUC1-229ENST00000620770 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
MUC1-229ENST00000620770 HDGFP51858 240 aaKnown RBP19.56■□□□□ 0.72
MUC1-229ENST00000620770 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.56■□□□□ 0.72
MUC1-229ENST00000620770 PPLO60437 1756 aa19.55■□□□□ 0.72
MUC1-229ENST00000620770 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
MUC1-229ENST00000620770 NKTRP30414 1462 aaKnown RBP19.54■□□□□ 0.72
MUC1-229ENST00000620770 IFT172Q9UG01 1749 aa19.52■□□□□ 0.72
MUC1-229ENST00000620770 HSPA1LP34931 641 aa19.52■□□□□ 0.72
MUC1-229ENST00000620770 KDM2AQ9Y2K7 1162 aa19.52■□□□□ 0.72
MUC1-229ENST00000620770 PLEKHG1Q9ULL1 1385 aa19.52■□□□□ 0.72
MUC1-229ENST00000620770 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
MUC1-229ENST00000620770 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
MUC1-229ENST00000620770 TONSLQ96HA7 1378 aa19.51■□□□□ 0.71
MUC1-229ENST00000620770 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
MUC1-229ENST00000620770 VGFO15240 615 aaPredicted RBP19.5■□□□□ 0.71
MUC1-229ENST00000620770 SLC26A8Q96RN1 970 aa19.5■□□□□ 0.71
MUC1-229ENST00000620770 ADGRF5Q8IZF2 1346 aa19.5■□□□□ 0.71
MUC1-229ENST00000620770 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
MUC1-229ENST00000620770 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
MUC1-229ENST00000620770 KCNA6P17658 529 aa19.48■□□□□ 0.71
MUC1-229ENST00000620770 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
MUC1-229ENST00000620770 MYOM2P54296 1465 aa19.48■□□□□ 0.71
MUC1-229ENST00000620770 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
MUC1-229ENST00000620770 SETBP1Q9Y6X0 1596 aa19.44■□□□□ 0.7
MUC1-229ENST00000620770 NRXN3Q9Y4C0 1643 aa19.44■□□□□ 0.7
MUC1-229ENST00000620770 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
MUC1-229ENST00000620770 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
MUC1-229ENST00000620770 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
MUC1-229ENST00000620770 PROSER2Q86WR7 435 aaPredicted RBP19.42■□□□□ 0.7
MUC1-229ENST00000620770 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
MUC1-229ENST00000620770 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
MUC1-229ENST00000620770 MSH6P52701 1360 aa19.4■□□□□ 0.7
MUC1-229ENST00000620770 PRAG1Q86YV5 1406 aa19.38■□□□□ 0.69
MUC1-229ENST00000620770 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
MUC1-229ENST00000620770 TBX22Q9Y458 520 aa19.38■□□□□ 0.69
MUC1-229ENST00000620770 FAM135BQ49AJ0 1406 aa19.37■□□□□ 0.69
MUC1-229ENST00000620770 METP08581 1390 aa19.37■□□□□ 0.69
MUC1-229ENST00000620770 CFAP70Q5T0N1 1121 aa19.37■□□□□ 0.69
MUC1-229ENST00000620770 STAC3Q96MF2 364 aa19.37■□□□□ 0.69
MUC1-229ENST00000620770 SETD1AO15047 1707 aaKnown RBP19.35■□□□□ 0.69
MUC1-229ENST00000620770 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
MUC1-229ENST00000620770 LAMC1P11047 1609 aa19.35■□□□□ 0.69
MUC1-229ENST00000620770 TMEM132EQ6IEE7 984 aa19.34■□□□□ 0.69
MUC1-229ENST00000620770 C14orf93Q9H972 538 aaKnown RBP19.34■□□□□ 0.69
MUC1-229ENST00000620770 XRN1Q8IZH2 1706 aaKnown RBP19.34■□□□□ 0.69
MUC1-229ENST00000620770 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
MUC1-229ENST00000620770 SOCS7O14512 581 aa19.33■□□□□ 0.68
MUC1-229ENST00000620770 ASXL1Q8IXJ9 1541 aa19.33■□□□□ 0.68
MUC1-229ENST00000620770 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.32■□□□□ 0.68
MUC1-229ENST00000620770 NBPF8Q3BBV2 869 aa19.32■□□□□ 0.68
MUC1-229ENST00000620770 PTPRUQ92729 1446 aa19.32■□□□□ 0.68
MUC1-229ENST00000620770 PHLPP1O60346 1717 aa19.31■□□□□ 0.68
MUC1-229ENST00000620770 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
MUC1-229ENST00000620770 STK26Q9P289 416 aa19.31■□□□□ 0.68
MUC1-229ENST00000620770 C14orf37Q86TY3 774 aa19.3■□□□□ 0.68
MUC1-229ENST00000620770 TIMELESSQ9UNS1 1208 aa19.3■□□□□ 0.68
MUC1-229ENST00000620770 AMOTL2Q9Y2J4 779 aa19.29■□□□□ 0.68
MUC1-229ENST00000620770 TRPM1Q7Z4N2 1603 aa19.27■□□□□ 0.68
MUC1-229ENST00000620770 NBPF1Q3BBV0 1214 aa19.27■□□□□ 0.68
MUC1-229ENST00000620770 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
MUC1-229ENST00000620770 ADGRB1O14514 1584 aa19.27■□□□□ 0.67
MUC1-229ENST00000620770 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
MUC1-229ENST00000620770 ROCK2O75116 1388 aaKnown RBP19.26■□□□□ 0.67
MUC1-229ENST00000620770 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
MUC1-229ENST00000620770 SLAIN2Q9P270 581 aa19.25■□□□□ 0.67
MUC1-229ENST00000620770 RALGAPBQ86X10 1494 aa19.24■□□□□ 0.67
MUC1-229ENST00000620770 DCCP43146 1447 aa19.23■□□□□ 0.67
MUC1-229ENST00000620770 COL16A1Q07092 1604 aaPredicted RBP19.22■□□□□ 0.67
MUC1-229ENST00000620770 CADPS2Q86UW7 1296 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms