RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 PLEKHD1A6NEE1 506 aa10.6□□□□□ -0.71
CHD7-212ENST00000618450 ZNF777Q9ULD5 760 aaPredicted RBP10.6□□□□□ -0.71
CHD7-212ENST00000618450 ABCA9Q8IUA7 1624 aa10.59□□□□□ -0.71
CHD7-212ENST00000618450 SKAP1Q86WV1 359 aa10.59□□□□□ -0.71
CHD7-212ENST00000618450 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
CHD7-212ENST00000618450 MAP3K4Q9Y6R4 1608 aa10.59□□□□□ -0.71
CHD7-212ENST00000618450 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
CHD7-212ENST00000618450 UHRF1BP1LA0JNW5 1464 aa10.58□□□□□ -0.72
CHD7-212ENST00000618450 PLCH2O75038 1416 aa10.58□□□□□ -0.72
CHD7-212ENST00000618450 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
CHD7-212ENST00000618450 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
CHD7-212ENST00000618450 ZNF326Q5BKZ1 582 aaKnown RBP10.58□□□□□ -0.72
CHD7-212ENST00000618450 CHMP7Q8WUX9 453 aaPredicted RBP10.57□□□□□ -0.72
CHD7-212ENST00000618450 PANK3Q9H999 370 aa10.57□□□□□ -0.72
CHD7-212ENST00000618450 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
CHD7-212ENST00000618450 PLIN1O60240 522 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 ERVK-7P63135 1459 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 IQSEC2Q5JU85 1478 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 NBR1Q14596 966 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 ADAMTS8Q9UP79 889 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 USP19O94966 1318 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 MYOM2P54296 1465 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 SCAF11Q99590 1463 aaKnown RBP10.56□□□□□ -0.72
CHD7-212ENST00000618450 CRBNQ96SW2 442 aa10.56□□□□□ -0.72
CHD7-212ENST00000618450 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
CHD7-212ENST00000618450 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
CHD7-212ENST00000618450 TRAPPC8Q9Y2L5 1435 aa10.55□□□□□ -0.72
CHD7-212ENST00000618450 ANP32AP39687 249 aaKnown RBP10.55□□□□□ -0.72
CHD7-212ENST00000618450 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
CHD7-212ENST00000618450 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
CHD7-212ENST00000618450 SETBP1Q9Y6X0 1596 aa10.54□□□□□ -0.72
CHD7-212ENST00000618450 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
CHD7-212ENST00000618450 PPRC1Q5VV67 1664 aaKnown RBP10.53□□□□□ -0.72
CHD7-212ENST00000618450 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
CHD7-212ENST00000618450 PPLO60437 1756 aa10.53□□□□□ -0.72
CHD7-212ENST00000618450 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.73
CHD7-212ENST00000618450 ADGRB1O14514 1584 aa10.52□□□□□ -0.73
CHD7-212ENST00000618450 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
CHD7-212ENST00000618450 LMTK2Q8IWU2 1503 aa10.51□□□□□ -0.73
CHD7-212ENST00000618450 KIF1BO60333 1816 aa10.51□□□□□ -0.73
CHD7-212ENST00000618450 ADGRB2O60241 1585 aa10.51□□□□□ -0.73
CHD7-212ENST00000618450 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
CHD7-212ENST00000618450 EFCAB6Q5THR3 1501 aa10.5□□□□□ -0.73
CHD7-212ENST00000618450 ADGRB3O60242 1522 aa10.5□□□□□ -0.73
CHD7-212ENST00000618450 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
CHD7-212ENST00000618450 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
CHD7-212ENST00000618450 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
CHD7-212ENST00000618450 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
CHD7-212ENST00000618450 CC2D1BQ5T0F9 858 aaKnown RBP10.49□□□□□ -0.73
CHD7-212ENST00000618450 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
CHD7-212ENST00000618450 SBNO2Q9Y2G9 1366 aa10.49□□□□□ -0.73
CHD7-212ENST00000618450 CNGB1Q14028 1251 aaPredicted RBP10.48□□□□□ -0.73
CHD7-212ENST00000618450 POLR3GLQ9BT43 218 aa10.48□□□□□ -0.73
CHD7-212ENST00000618450 PIK3C2BO00750 1634 aa10.48□□□□□ -0.73
CHD7-212ENST00000618450 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
CHD7-212ENST00000618450 TMF1P82094 1093 aa10.47□□□□□ -0.73
CHD7-212ENST00000618450 CENPQQ7L2Z9 268 aaPredicted RBP10.47□□□□□ -0.73
CHD7-212ENST00000618450 CARD14Q9BXL6 1004 aa10.47□□□□□ -0.73
CHD7-212ENST00000618450 ATP7AQ04656 1500 aa10.47□□□□□ -0.73
CHD7-212ENST00000618450 SIGLEC1Q9BZZ2 1709 aa10.47□□□□□ -0.73
CHD7-212ENST00000618450 RGL3Q3MIN7 710 aa10.46□□□□□ -0.74
CHD7-212ENST00000618450 STAC3Q96MF2 364 aa10.46□□□□□ -0.74
CHD7-212ENST00000618450 FRMPD1Q5SYB0 1578 aa10.46□□□□□ -0.74
CHD7-212ENST00000618450 ARHGEF28Q8N1W1 1705 aaKnown RBP10.45□□□□□ -0.74
CHD7-212ENST00000618450 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
CHD7-212ENST00000618450 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
CHD7-212ENST00000618450 SALL2Q9Y467 1007 aaPredicted RBP10.44□□□□□ -0.74
CHD7-212ENST00000618450 KANK1Q14678 1352 aa10.44□□□□□ -0.74
CHD7-212ENST00000618450 IGHDP01880 384 aa10.44□□□□□ -0.74
CHD7-212ENST00000618450 FANCAO15360 1455 aa10.43□□□□□ -0.74
CHD7-212ENST00000618450 NFKBIBQ15653 356 aa10.43□□□□□ -0.74
CHD7-212ENST00000618450 ANKRD26Q9UPS8 1709 aa10.43□□□□□ -0.74
CHD7-212ENST00000618450 NEFMP07197 916 aa10.43□□□□□ -0.74
CHD7-212ENST00000618450 FAM161AQ3B820 660 aa10.42□□□□□ -0.74
CHD7-212ENST00000618450 PPM1GO15355 546 aaPredicted RBP10.41□□□□□ -0.74
CHD7-212ENST00000618450 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
CHD7-212ENST00000618450 ANTXR1Q9H6X2 564 aa10.41□□□□□ -0.74
CHD7-212ENST00000618450 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
CHD7-212ENST00000618450 COL3A1P02461 1466 aaPredicted RBP10.4□□□□□ -0.74
CHD7-212ENST00000618450 BCAR3O75815 825 aa10.4□□□□□ -0.74
CHD7-212ENST00000618450 SEC24BO95487 1268 aa10.4□□□□□ -0.74
CHD7-212ENST00000618450 CLTCQ00610 1675 aaKnown RBP10.39□□□□□ -0.75
CHD7-212ENST00000618450 ANO8Q9HCE9 1232 aaPredicted RBP10.39□□□□□ -0.75
CHD7-212ENST00000618450 TULP4Q9NRJ4 1543 aa10.39□□□□□ -0.75
CHD7-212ENST00000618450 FBLN2P98095 1184 aa10.39□□□□□ -0.75
CHD7-212ENST00000618450 HECW2Q9P2P5 1572 aa10.39□□□□□ -0.75
CHD7-212ENST00000618450 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
CHD7-212ENST00000618450 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CHD7-212ENST00000618450 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
CHD7-212ENST00000618450 DDRGK1Q96HY6 314 aa10.38□□□□□ -0.75
CHD7-212ENST00000618450 ADGRL1O94910 1474 aa10.38□□□□□ -0.75
CHD7-212ENST00000618450 NPM2Q86SE8 214 aaKnown RBP10.38□□□□□ -0.75
CHD7-212ENST00000618450 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
CHD7-212ENST00000618450 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
CHD7-212ENST00000618450 CAMSAP1Q5T5Y3 1602 aa10.37□□□□□ -0.75
CHD7-212ENST00000618450 PDE3AQ14432 1141 aa10.37□□□□□ -0.75
CHD7-212ENST00000618450 GLI2P10070 1586 aa10.37□□□□□ -0.75
CHD7-212ENST00000618450 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms