RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 FANCAO15360 1455 aa16.87■□□□□ 0.29
PPP4R3B-206ENST00000616407 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
PPP4R3B-206ENST00000616407 PAK3O75914 559 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3B-206ENST00000616407 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
PPP4R3B-206ENST00000616407 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
PPP4R3B-206ENST00000616407 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
PPP4R3B-206ENST00000616407 SLC52A1Q9NWF4 448 aa16.84■□□□□ 0.29
PPP4R3B-206ENST00000616407 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
PPP4R3B-206ENST00000616407 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.29
PPP4R3B-206ENST00000616407 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.29
PPP4R3B-206ENST00000616407 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
PPP4R3B-206ENST00000616407 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
PPP4R3B-206ENST00000616407 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
PPP4R3B-206ENST00000616407 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
PPP4R3B-206ENST00000616407 PDE4AP27815 886 aa16.82■□□□□ 0.28
PPP4R3B-206ENST00000616407 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
PPP4R3B-206ENST00000616407 ARXQ96QS3 562 aa16.82■□□□□ 0.28
PPP4R3B-206ENST00000616407 IPO9Q96P70 1041 aaKnown RBP16.81■□□□□ 0.28
PPP4R3B-206ENST00000616407 DIAPH1O60610 1272 aaKnown RBP16.81■□□□□ 0.28
PPP4R3B-206ENST00000616407 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
PPP4R3B-206ENST00000616407 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
PPP4R3B-206ENST00000616407 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 COG3Q96JB2 828 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 DISP3Q9P2K9 1392 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 ELL2O00472 640 aaPredicted RBP16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
PPP4R3B-206ENST00000616407 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
PPP4R3B-206ENST00000616407 ADGRL2O95490 1459 aa16.78■□□□□ 0.28
PPP4R3B-206ENST00000616407 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.28
PPP4R3B-206ENST00000616407 RIPK4P57078 832 aa16.77■□□□□ 0.28
PPP4R3B-206ENST00000616407 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
PPP4R3B-206ENST00000616407 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.27
PPP4R3B-206ENST00000616407 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
PPP4R3B-206ENST00000616407 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
PPP4R3B-206ENST00000616407 TEX14Q8IWB6 1497 aa16.75■□□□□ 0.27
PPP4R3B-206ENST00000616407 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
PPP4R3B-206ENST00000616407 KDM6BO15054 1643 aa16.75■□□□□ 0.27
PPP4R3B-206ENST00000616407 IDI1Q13907 227 aa16.75■□□□□ 0.27
PPP4R3B-206ENST00000616407 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
PPP4R3B-206ENST00000616407 AMPHP49418 695 aa16.74■□□□□ 0.27
PPP4R3B-206ENST00000616407 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
PPP4R3B-206ENST00000616407 APBB1O00213 710 aa16.73■□□□□ 0.27
PPP4R3B-206ENST00000616407 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
PPP4R3B-206ENST00000616407 HMOX1P09601 288 aa16.73■□□□□ 0.27
PPP4R3B-206ENST00000616407 TESK2Q96S53 571 aa16.73■□□□□ 0.27
PPP4R3B-206ENST00000616407 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
PPP4R3B-206ENST00000616407 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
PPP4R3B-206ENST00000616407 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
PPP4R3B-206ENST00000616407 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
PPP4R3B-206ENST00000616407 CDK19Q9BWU1 502 aa16.72■□□□□ 0.27
PPP4R3B-206ENST00000616407 SCAF11Q99590 1463 aaKnown RBP16.71■□□□□ 0.27
PPP4R3B-206ENST00000616407 WDR7Q9Y4E6 1490 aa16.71■□□□□ 0.27
PPP4R3B-206ENST00000616407 TXNDC2Q86VQ3 553 aa16.71■□□□□ 0.27
PPP4R3B-206ENST00000616407 FBXO31Q5XUX0 539 aaPredicted RBP16.71■□□□□ 0.27
PPP4R3B-206ENST00000616407 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
PPP4R3B-206ENST00000616407 NOS1P29475 1434 aa16.7■□□□□ 0.26
PPP4R3B-206ENST00000616407 BCAR3O75815 825 aa16.7■□□□□ 0.26
PPP4R3B-206ENST00000616407 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
PPP4R3B-206ENST00000616407 NSD3Q9BZ95 1437 aa16.69■□□□□ 0.26
PPP4R3B-206ENST00000616407 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
PPP4R3B-206ENST00000616407 ABCC10Q5T3U5 1492 aa16.69■□□□□ 0.26
PPP4R3B-206ENST00000616407 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
PPP4R3B-206ENST00000616407 A0A0G2JS52 829 aa16.68■□□□□ 0.26
PPP4R3B-206ENST00000616407 DZIP1LQ8IYY4 767 aaKnown RBP16.67■□□□□ 0.26
PPP4R3B-206ENST00000616407 C14orf93Q9H972 538 aaKnown RBP16.67■□□□□ 0.26
PPP4R3B-206ENST00000616407 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3B-206ENST00000616407 ABCA8O94911 1581 aa16.67■□□□□ 0.26
PPP4R3B-206ENST00000616407 ARHGEF12Q9NZN5 1544 aa16.66■□□□□ 0.26
PPP4R3B-206ENST00000616407 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
PPP4R3B-206ENST00000616407 UHRF1BP1Q6BDS2 1440 aa16.66■□□□□ 0.26
PPP4R3B-206ENST00000616407 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 DEKP35659 375 aaKnown RBP16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 ANP32BQ92688 251 aaKnown RBP16.64■□□□□ 0.25
PPP4R3B-206ENST00000616407 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 A2MP01023 1474 aa16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 HSP90AB1P08238 724 aaKnown RBP16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
PPP4R3B-206ENST00000616407 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 WWC1Q8IX03 1113 aa16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 OS9Q13438 667 aaPredicted RBP16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
PPP4R3B-206ENST00000616407 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
PPP4R3B-206ENST00000616407 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
PPP4R3B-206ENST00000616407 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
PPP4R3B-206ENST00000616407 SLC26A8Q96RN1 970 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms