RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ABCC5O15440 1437 aa27.68■■■□□ 2.02
TRAPPC3-209ENST00000616395 LMTK2Q8IWU2 1503 aa27.68■■■□□ 2.02
TRAPPC3-209ENST00000616395 FGD6Q6ZV73 1430 aa27.67■■■□□ 2.02
TRAPPC3-209ENST00000616395 NOS1P29475 1434 aa27.66■■■□□ 2.02
TRAPPC3-209ENST00000616395 CROCC2H7BZ55 1655 aa27.64■■■□□ 2.02
TRAPPC3-209ENST00000616395 RXRBP28702 533 aa27.63■■■□□ 2.01
TRAPPC3-209ENST00000616395 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
TRAPPC3-209ENST00000616395 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
TRAPPC3-209ENST00000616395 SLC52A1Q9NWF4 448 aa27.61■■■□□ 2.01
TRAPPC3-209ENST00000616395 PLEKHG1Q9ULL1 1385 aa27.61■■■□□ 2.01
TRAPPC3-209ENST00000616395 CHD2O14647 1828 aaKnown RBP27.6■■■□□ 2.01
TRAPPC3-209ENST00000616395 C14orf37Q86TY3 774 aa27.59■■■□□ 2.01
TRAPPC3-209ENST00000616395 ZFYVE9O95405 1425 aa27.59■■■□□ 2.01
TRAPPC3-209ENST00000616395 AHDC1Q5TGY3 1603 aaPredicted RBP27.58■■■□□ 2.01
TRAPPC3-209ENST00000616395 SHPRHQ149N8 1683 aa27.58■■■□□ 2.01
TRAPPC3-209ENST00000616395 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2.01
TRAPPC3-209ENST00000616395 DAPK1P53355 1430 aa27.57■■■□□ 2
TRAPPC3-209ENST00000616395 PPP1R15AO75807 674 aaPredicted RBP27.56■■■□□ 2
TRAPPC3-209ENST00000616395 CDK12Q9NYV4 1490 aaPredicted RBP27.55■■■□□ 2
TRAPPC3-209ENST00000616395 RIMS2Q9UQ26 1411 aa27.54■■■□□ 2
TRAPPC3-209ENST00000616395 NUTM2BA6NNL0 878 aaPredicted RBP27.54■■■□□ 2
TRAPPC3-209ENST00000616395 NUTM2EB1AL46 878 aaPredicted RBP27.54■■■□□ 2
TRAPPC3-209ENST00000616395 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
TRAPPC3-209ENST00000616395 NUTM2AQ8IVF1 878 aaPredicted RBP27.54■■■□□ 2
TRAPPC3-209ENST00000616395 TBX22Q9Y458 520 aa27.53■■■□□ 2
TRAPPC3-209ENST00000616395 PTPN23Q9H3S7 1636 aa27.53■■■□□ 2
TRAPPC3-209ENST00000616395 ATF3P18847 181 aa27.52■■■□□ 2
TRAPPC3-209ENST00000616395 C19orf44Q9H6X5 657 aa27.52■■■□□ 2
TRAPPC3-209ENST00000616395 CHIC2Q9UKJ5 165 aa27.52■■■□□ 2
TRAPPC3-209ENST00000616395 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
TRAPPC3-209ENST00000616395 ANKRD30AQ9BXX3 1397 aa27.51■■□□□ 1.99
TRAPPC3-209ENST00000616395 HDGFP51858 240 aaKnown RBP27.5■■□□□ 1.99
TRAPPC3-209ENST00000616395 DIP2AQ14689 1571 aa27.49■■□□□ 1.99
TRAPPC3-209ENST00000616395 AFF2P51816 1311 aa27.48■■□□□ 1.99
TRAPPC3-209ENST00000616395 MYO5BQ9ULV0 1848 aa27.48■■□□□ 1.99
TRAPPC3-209ENST00000616395 BRINP3Q76B58 766 aa27.47■■□□□ 1.99
TRAPPC3-209ENST00000616395 GCC2Q8IWJ2 1684 aa27.46■■□□□ 1.99
TRAPPC3-209ENST00000616395 RPRD2Q5VT52 1461 aaKnown RBP27.46■■□□□ 1.99
TRAPPC3-209ENST00000616395 TMEM131LA2VDJ0 1609 aa27.45■■□□□ 1.99
TRAPPC3-209ENST00000616395 SRCAPQ6ZRS2 3230 aa27.45■■□□□ 1.98
TRAPPC3-209ENST00000616395 ADAMTS13Q76LX8 1427 aa27.45■■□□□ 1.98
TRAPPC3-209ENST00000616395 NUTM2DQ5VT03 806 aaPredicted RBP27.42■■□□□ 1.98
TRAPPC3-209ENST00000616395 RGS12O14924 1447 aa27.42■■□□□ 1.98
TRAPPC3-209ENST00000616395 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.41■■□□□ 1.98
TRAPPC3-209ENST00000616395 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
TRAPPC3-209ENST00000616395 CHGAP10645 457 aaKnown RBP27.4■■□□□ 1.98
TRAPPC3-209ENST00000616395 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
TRAPPC3-209ENST00000616395 ASXL1Q8IXJ9 1541 aa27.37■■□□□ 1.97
TRAPPC3-209ENST00000616395 C8orf37Q96NL8 207 aa27.37■■□□□ 1.97
TRAPPC3-209ENST00000616395 QTRT2Q9H974 415 aaKnown RBP27.37■■□□□ 1.97
TRAPPC3-209ENST00000616395 AMOTL2Q9Y2J4 779 aa27.37■■□□□ 1.97
TRAPPC3-209ENST00000616395 RBM6P78332 1123 aaKnown RBP27.36■■□□□ 1.97
TRAPPC3-209ENST00000616395 PTPRUQ92729 1446 aa27.34■■□□□ 1.97
TRAPPC3-209ENST00000616395 DCCP43146 1447 aa27.33■■□□□ 1.97
TRAPPC3-209ENST00000616395 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
TRAPPC3-209ENST00000616395 TRPM2O94759 1503 aa27.31■■□□□ 1.96
TRAPPC3-209ENST00000616395 LRRC59Q96AG4 307 aaKnown RBP27.31■■□□□ 1.96
TRAPPC3-209ENST00000616395 ANKRD50Q9ULJ7 1429 aa27.3■■□□□ 1.96
TRAPPC3-209ENST00000616395 NHSL1Q5SYE7 1610 aa27.29■■□□□ 1.96
TRAPPC3-209ENST00000616395 MST1RQ04912 1400 aa27.29■■□□□ 1.96
TRAPPC3-209ENST00000616395 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
TRAPPC3-209ENST00000616395 DDX17Q92841 729 aaKnown RBP27.27■■□□□ 1.96
TRAPPC3-209ENST00000616395 ATAD2Q6PL18 1390 aa27.24■■□□□ 1.95
TRAPPC3-209ENST00000616395 UNC13BO14795 1591 aa27.24■■□□□ 1.95
TRAPPC3-209ENST00000616395 APLP2Q06481 763 aa27.23■■□□□ 1.95
TRAPPC3-209ENST00000616395 NGLY1Q96IV0 654 aa27.23■■□□□ 1.95
TRAPPC3-209ENST00000616395 ADAMTS2O95450 1211 aa27.22■■□□□ 1.95
TRAPPC3-209ENST00000616395 XRN1Q8IZH2 1706 aaKnown RBP27.21■■□□□ 1.95
TRAPPC3-209ENST00000616395 E9PCH4 1651 aa27.2■■□□□ 1.94
TRAPPC3-209ENST00000616395 ZRANB1Q9UGI0 708 aa27.19■■□□□ 1.94
TRAPPC3-209ENST00000616395 NRXN3Q9Y4C0 1643 aa27.16■■□□□ 1.94
TRAPPC3-209ENST00000616395 FAM50AQ14320 339 aaKnown RBP27.16■■□□□ 1.94
TRAPPC3-209ENST00000616395 USP21Q9UK80 565 aa27.15■■□□□ 1.94
TRAPPC3-209ENST00000616395 SETBP1Q9Y6X0 1596 aa27.14■■□□□ 1.94
TRAPPC3-209ENST00000616395 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.93
TRAPPC3-209ENST00000616395 FOXD1Q16676 465 aa27.14■■□□□ 1.93
TRAPPC3-209ENST00000616395 METP08581 1390 aa27.13■■□□□ 1.93
TRAPPC3-209ENST00000616395 TRPC5Q9UL62 973 aaPredicted RBP27.12■■□□□ 1.93
TRAPPC3-209ENST00000616395 NALCNQ8IZF0 1738 aa27.08■■□□□ 1.93
TRAPPC3-209ENST00000616395 C1orf167Q5SNV9 1468 aa27.07■■□□□ 1.92
TRAPPC3-209ENST00000616395 FNBP4Q8N3X1 1017 aaPredicted RBP27.07■■□□□ 1.92
TRAPPC3-209ENST00000616395 IQGAP3Q86VI3 1631 aa27.07■■□□□ 1.92
TRAPPC3-209ENST00000616395 EP400Q96L91 3159 aa27.05■■□□□ 1.92
TRAPPC3-209ENST00000616395 ATRNO75882 1429 aa27.05■■□□□ 1.92
TRAPPC3-209ENST00000616395 SOS2Q07890 1332 aaPredicted RBP27.04■■□□□ 1.92
TRAPPC3-209ENST00000616395 LAMC1P11047 1609 aa27.04■■□□□ 1.92
TRAPPC3-209ENST00000616395 PTCH1Q13635 1447 aa27.03■■□□□ 1.92
TRAPPC3-209ENST00000616395 CCDC125Q86Z20 511 aa27.03■■□□□ 1.92
TRAPPC3-209ENST00000616395 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
TRAPPC3-209ENST00000616395 ORAI2Q96SN7 254 aa27.02■■□□□ 1.92
TRAPPC3-209ENST00000616395 NUP155O75694 1391 aa27■■□□□ 1.91
TRAPPC3-209ENST00000616395 BCL9LQ86UU0 1499 aa26.95■■□□□ 1.9
TRAPPC3-209ENST00000616395 COL22A1Q8NFW1 1626 aaPredicted RBP26.94■■□□□ 1.9
TRAPPC3-209ENST00000616395 ROCK1Q13464 1354 aa26.93■■□□□ 1.9
TRAPPC3-209ENST00000616395 MYOM2P54296 1465 aa26.93■■□□□ 1.9
TRAPPC3-209ENST00000616395 GJD4Q96KN9 370 aaPredicted RBP26.9■■□□□ 1.9
TRAPPC3-209ENST00000616395 NEXMIFQ5QGS0 1516 aa26.9■■□□□ 1.9
TRAPPC3-209ENST00000616395 ROBO2Q9HCK4 1378 aa26.9■■□□□ 1.9
TRAPPC3-209ENST00000616395 SPHKAPQ2M3C7 1700 aa26.9■■□□□ 1.9
TRAPPC3-209ENST00000616395 BLMP54132 1417 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms