RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ZFYVE9O95405 1425 aa31.97■■■□□ 2.71
TRAPPC3-208ENST00000616074 IQGAP3Q86VI3 1631 aa31.97■■■□□ 2.71
TRAPPC3-208ENST00000616074 NWD1Q149M9 1564 aa31.96■■■□□ 2.71
TRAPPC3-208ENST00000616074 TMEM94Q12767 1356 aa31.95■■■□□ 2.71
TRAPPC3-208ENST00000616074 RIMS2Q9UQ26 1411 aa31.92■■■□□ 2.7
TRAPPC3-208ENST00000616074 NKTRP30414 1462 aaKnown RBP31.91■■■□□ 2.7
TRAPPC3-208ENST00000616074 PPARGC1BQ86YN6 1023 aaKnown RBP31.9■■■□□ 2.7
TRAPPC3-208ENST00000616074 BCANQ96GW7 911 aa31.9■■■□□ 2.7
TRAPPC3-208ENST00000616074 ITGAEP38570 1179 aa31.89■■■□□ 2.7
TRAPPC3-208ENST00000616074 PLEKHG1Q9ULL1 1385 aa31.89■■■□□ 2.7
TRAPPC3-208ENST00000616074 PROSER2Q86WR7 435 aaPredicted RBP31.88■■■□□ 2.69
TRAPPC3-208ENST00000616074 RBM33Q96EV2 1170 aaKnown RBP31.88■■■□□ 2.69
TRAPPC3-208ENST00000616074 CHD2O14647 1828 aaKnown RBP31.86■■■□□ 2.69
TRAPPC3-208ENST00000616074 PPP1R15AO75807 674 aaPredicted RBP31.85■■■□□ 2.69
TRAPPC3-208ENST00000616074 FAM135BQ49AJ0 1406 aa31.84■■■□□ 2.69
TRAPPC3-208ENST00000616074 CHGAP10645 457 aaKnown RBP31.84■■■□□ 2.69
TRAPPC3-208ENST00000616074 NUP155O75694 1391 aa31.83■■■□□ 2.69
TRAPPC3-208ENST00000616074 PHF23Q9BUL5 403 aaPredicted RBP31.83■■■□□ 2.69
TRAPPC3-208ENST00000616074 HDGFP51858 240 aaKnown RBP31.82■■■□□ 2.68
TRAPPC3-208ENST00000616074 ROBO1Q9Y6N7 1651 aa31.82■■■□□ 2.68
TRAPPC3-208ENST00000616074 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.77■■■□□ 2.68
TRAPPC3-208ENST00000616074 NUTM2DQ5VT03 806 aaPredicted RBP31.76■■■□□ 2.67
TRAPPC3-208ENST00000616074 MSH6P52701 1360 aa31.75■■■□□ 2.67
TRAPPC3-208ENST00000616074 ADAMTS13Q76LX8 1427 aa31.75■■■□□ 2.67
TRAPPC3-208ENST00000616074 TBX22Q9Y458 520 aa31.74■■■□□ 2.67
TRAPPC3-208ENST00000616074 DIP2AQ14689 1571 aa31.73■■■□□ 2.67
TRAPPC3-208ENST00000616074 SPHKAPQ2M3C7 1700 aa31.73■■■□□ 2.67
TRAPPC3-208ENST00000616074 RRBP1Q9P2E9 1410 aaKnown RBP31.67■■■□□ 2.66
TRAPPC3-208ENST00000616074 SLAIN2Q9P270 581 aa31.64■■■□□ 2.66
TRAPPC3-208ENST00000616074 PIK3R4Q99570 1358 aa31.64■■■□□ 2.66
TRAPPC3-208ENST00000616074 TRPM2O94759 1503 aa31.64■■■□□ 2.66
TRAPPC3-208ENST00000616074 PHLPP1O60346 1717 aa31.63■■■□□ 2.65
TRAPPC3-208ENST00000616074 NCOA3Q9Y6Q9 1424 aa31.63■■■□□ 2.65
TRAPPC3-208ENST00000616074 NRXN3Q9Y4C0 1643 aa31.61■■■□□ 2.65
TRAPPC3-208ENST00000616074 RGS17Q9UGC6 210 aaPredicted RBP31.61■■■□□ 2.65
TRAPPC3-208ENST00000616074 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.6■■■□□ 2.65
TRAPPC3-208ENST00000616074 NAIPQ13075 1403 aa31.58■■■□□ 2.65
TRAPPC3-208ENST00000616074 PTPRUQ92729 1446 aa31.58■■■□□ 2.65
TRAPPC3-208ENST00000616074 CLTCL1P53675 1640 aa31.58■■■□□ 2.65
TRAPPC3-208ENST00000616074 C14orf37Q86TY3 774 aa31.57■■■□□ 2.64
TRAPPC3-208ENST00000616074 SETBP1Q9Y6X0 1596 aa31.56■■■□□ 2.64
TRAPPC3-208ENST00000616074 AMOTL2Q9Y2J4 779 aa31.54■■■□□ 2.64
TRAPPC3-208ENST00000616074 XRN1Q8IZH2 1706 aaKnown RBP31.53■■■□□ 2.64
TRAPPC3-208ENST00000616074 ZNF326Q5BKZ1 582 aaKnown RBP31.53■■■□□ 2.64
TRAPPC3-208ENST00000616074 COL16A1Q07092 1604 aaPredicted RBP31.53■■■□□ 2.64
TRAPPC3-208ENST00000616074 NEXMIFQ5QGS0 1516 aa31.5■■■□□ 2.63
TRAPPC3-208ENST00000616074 C19orf44Q9H6X5 657 aa31.5■■■□□ 2.63
TRAPPC3-208ENST00000616074 KIF1BO60333 1816 aa31.49■■■□□ 2.63
TRAPPC3-208ENST00000616074 CADPS2Q86UW7 1296 aa31.49■■■□□ 2.63
TRAPPC3-208ENST00000616074 JCADQ9P266 1359 aa31.48■■■□□ 2.63
TRAPPC3-208ENST00000616074 ATF3P18847 181 aa31.46■■■□□ 2.63
TRAPPC3-208ENST00000616074 AHDC1Q5TGY3 1603 aaPredicted RBP31.45■■■□□ 2.62
TRAPPC3-208ENST00000616074 METP08581 1390 aa31.44■■■□□ 2.62
TRAPPC3-208ENST00000616074 HFM1A2PYH4 1435 aa31.44■■■□□ 2.62
TRAPPC3-208ENST00000616074 POTEAQ6S8J7 498 aa31.42■■■□□ 2.62
TRAPPC3-208ENST00000616074 DCCP43146 1447 aa31.41■■■□□ 2.62
TRAPPC3-208ENST00000616074 TRIM52Q96A61 297 aa31.39■■■□□ 2.62
TRAPPC3-208ENST00000616074 SHPRHQ149N8 1683 aa31.36■■■□□ 2.61
TRAPPC3-208ENST00000616074 LRP6O75581 1613 aa31.35■■■□□ 2.61
TRAPPC3-208ENST00000616074 BRINP3Q76B58 766 aa31.35■■■□□ 2.61
TRAPPC3-208ENST00000616074 SETD1AO15047 1707 aaKnown RBP31.33■■■□□ 2.61
TRAPPC3-208ENST00000616074 NALCNQ8IZF0 1738 aa31.33■■■□□ 2.61
TRAPPC3-208ENST00000616074 MST1RQ04912 1400 aa31.32■■■□□ 2.61
TRAPPC3-208ENST00000616074 ASXL1Q8IXJ9 1541 aa31.32■■■□□ 2.6
TRAPPC3-208ENST00000616074 SPATA31A6Q5VVP1 1343 aa31.31■■■□□ 2.6
TRAPPC3-208ENST00000616074 SLC4A1APQ9BWU0 796 aaKnown RBP31.31■■■□□ 2.6
TRAPPC3-208ENST00000616074 ADGRL3Q9HAR2 1447 aa31.3■■■□□ 2.6
TRAPPC3-208ENST00000616074 NHSL1Q5SYE7 1610 aa31.29■■■□□ 2.6
TRAPPC3-208ENST00000616074 PPLO60437 1756 aa31.28■■■□□ 2.6
TRAPPC3-208ENST00000616074 VGFO15240 615 aaPredicted RBP31.25■■■□□ 2.59
TRAPPC3-208ENST00000616074 PTCH1Q13635 1447 aa31.23■■■□□ 2.59
TRAPPC3-208ENST00000616074 MEX3CQ5U5Q3 659 aaKnown RBP31.22■■■□□ 2.59
TRAPPC3-208ENST00000616074 RPGRIP1LQ68CZ1 1315 aa31.22■■■□□ 2.59
TRAPPC3-208ENST00000616074 FOXD1Q16676 465 aa31.2■■■□□ 2.59
TRAPPC3-208ENST00000616074 SETD5Q9C0A6 1442 aa31.2■■■□□ 2.59
TRAPPC3-208ENST00000616074 ROBO2Q9HCK4 1378 aa31.18■■■□□ 2.58
TRAPPC3-208ENST00000616074 PRAG1Q86YV5 1406 aa31.16■■■□□ 2.58
TRAPPC3-208ENST00000616074 C1orf167Q5SNV9 1468 aa31.14■■■□□ 2.58
TRAPPC3-208ENST00000616074 DDX17Q92841 729 aaKnown RBP31.14■■■□□ 2.58
TRAPPC3-208ENST00000616074 NUTM2BA6NNL0 878 aaPredicted RBP31.13■■■□□ 2.57
TRAPPC3-208ENST00000616074 NUTM2EB1AL46 878 aaPredicted RBP31.13■■■□□ 2.57
TRAPPC3-208ENST00000616074 ZNF772Q68DY9 489 aaPredicted RBP31.13■■■□□ 2.57
TRAPPC3-208ENST00000616074 NUTM2AQ8IVF1 878 aaPredicted RBP31.13■■■□□ 2.57
TRAPPC3-208ENST00000616074 CCDC144AA2RUR9 1427 aa31.12■■■□□ 2.57
TRAPPC3-208ENST00000616074 LRRC59Q96AG4 307 aaKnown RBP31.11■■■□□ 2.57
TRAPPC3-208ENST00000616074 IFT172Q9UG01 1749 aa31.1■■■□□ 2.57
TRAPPC3-208ENST00000616074 LAMC1P11047 1609 aa31.09■■■□□ 2.57
TRAPPC3-208ENST00000616074 SPATA31E1Q6ZUB1 1445 aa31.07■■■□□ 2.57
TRAPPC3-208ENST00000616074 PNPLA6Q8IY17 1366 aa31.07■■■□□ 2.56
TRAPPC3-208ENST00000616074 MPHOSPH9Q99550 1183 aa31.07■■■□□ 2.56
TRAPPC3-208ENST00000616074 ADGRF5Q8IZF2 1346 aa31.06■■■□□ 2.56
TRAPPC3-208ENST00000616074 RGL3Q3MIN7 710 aa31.03■■■□□ 2.56
TRAPPC3-208ENST00000616074 ORAI2Q96SN7 254 aa31.03■■■□□ 2.56
TRAPPC3-208ENST00000616074 AFF2P51816 1311 aa31.01■■■□□ 2.56
TRAPPC3-208ENST00000616074 CDC42BPGQ6DT37 1551 aa31■■■□□ 2.55
TRAPPC3-208ENST00000616074 ANKRD30BQ9BXX2 1392 aa30.99■■■□□ 2.55
TRAPPC3-208ENST00000616074 SOS2Q07890 1332 aaPredicted RBP30.98■■■□□ 2.55
TRAPPC3-208ENST00000616074 KNDC1Q76NI1 1749 aa30.96■■■□□ 2.55
TRAPPC3-208ENST00000616074 RXRBP28702 533 aa30.96■■■□□ 2.55
TRAPPC3-208ENST00000616074 C8orf37Q96NL8 207 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms