RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 GTPBP6O43824 516 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P24-202ENST00000615653 DACH1Q9UI36 760 aa8.22□□□□□ -1.09
HMGB1P24-202ENST00000615653 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.1
HMGB1P24-202ENST00000615653 SLF2Q8IX21 1173 aa8.21□□□□□ -1.1
HMGB1P24-202ENST00000615653 GMPR2Q9P2T1 348 aaKnown RBP8.21□□□□□ -1.1
HMGB1P24-202ENST00000615653 C11orf95C9JLR9 678 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P24-202ENST00000615653 PPEF1O14829 653 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P24-202ENST00000615653 AVPP01185 164 aa8.19□□□□□ -1.1
HMGB1P24-202ENST00000615653 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
HMGB1P24-202ENST00000615653 PCDHB3Q9Y5E6 796 aa8.19□□□□□ -1.1
HMGB1P24-202ENST00000615653 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
HMGB1P24-202ENST00000615653 LMOD2Q6P5Q4 547 aa8.18□□□□□ -1.1
HMGB1P24-202ENST00000615653 PRR14Q9BWN1 585 aa8.18□□□□□ -1.1
HMGB1P24-202ENST00000615653 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
HMGB1P24-202ENST00000615653 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
HMGB1P24-202ENST00000615653 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
HMGB1P24-202ENST00000615653 S1PR4O95977 384 aa8.16□□□□□ -1.1
HMGB1P24-202ENST00000615653 PKD2L1Q9P0L9 805 aa8.16□□□□□ -1.1
HMGB1P24-202ENST00000615653 TLL1O43897 1013 aa8.15□□□□□ -1.1
HMGB1P24-202ENST00000615653 AXIN1O15169 862 aa8.14□□□□□ -1.11
HMGB1P24-202ENST00000615653 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P24-202ENST00000615653 PDIA6Q15084 440 aa8.14□□□□□ -1.11
HMGB1P24-202ENST00000615653 CTC1Q2NKJ3 1217 aa8.14□□□□□ -1.11
HMGB1P24-202ENST00000615653 PRIM1P49642 420 aaKnown RBP8.13□□□□□ -1.11
HMGB1P24-202ENST00000615653 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
HMGB1P24-202ENST00000615653 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
HMGB1P24-202ENST00000615653 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
HMGB1P24-202ENST00000615653 PLA2G2CQ5R387 149 aa8.11□□□□□ -1.11
HMGB1P24-202ENST00000615653 TTC13Q8NBP0 860 aa8.11□□□□□ -1.11
HMGB1P24-202ENST00000615653 TOR4AQ9NXH8 423 aa8.11□□□□□ -1.11
HMGB1P24-202ENST00000615653 SUZ12Q15022 739 aaKnown RBP8.1□□□□□ -1.11
HMGB1P24-202ENST00000615653 SPDYE16A6NNV3 312 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P24-202ENST00000615653 FOXC1Q12948 553 aa8.09□□□□□ -1.11
HMGB1P24-202ENST00000615653 CDHR5Q9HBB8 845 aa8.08□□□□□ -1.12
HMGB1P24-202ENST00000615653 ADH1BP00325 375 aa8.07□□□□□ -1.12
HMGB1P24-202ENST00000615653 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
HMGB1P24-202ENST00000615653 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P24-202ENST00000615653 EYA1Q99502 592 aa8.05□□□□□ -1.12
HMGB1P24-202ENST00000615653 SLC6A16Q9GZN6 736 aa8.05□□□□□ -1.12
HMGB1P24-202ENST00000615653 SNRPBP14678 240 aaKnown RBP8.04□□□□□ -1.12
HMGB1P24-202ENST00000615653 CYP4X1Q8N118 509 aa8.04□□□□□ -1.12
HMGB1P24-202ENST00000615653 RPIAP49247 311 aa8.03□□□□□ -1.12
HMGB1P24-202ENST00000615653 PADI6Q6TGC4 694 aa8.03□□□□□ -1.12
HMGB1P24-202ENST00000615653 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
HMGB1P24-202ENST00000615653 GRXCR2A6NFK2 248 aa8.01□□□□□ -1.13
HMGB1P24-202ENST00000615653 OSBPP22059 807 aa8.01□□□□□ -1.13
HMGB1P24-202ENST00000615653 KMT5BQ4FZB7 885 aa8.01□□□□□ -1.13
HMGB1P24-202ENST00000615653 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
HMGB1P24-202ENST00000615653 NPDC1Q9NQX5 325 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P24-202ENST00000615653 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
HMGB1P24-202ENST00000615653 NR1I2O75469 434 aa7.99□□□□□ -1.13
HMGB1P24-202ENST00000615653 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
HMGB1P24-202ENST00000615653 CD2BP2O95400 341 aaKnown RBP7.97□□□□□ -1.13
HMGB1P24-202ENST00000615653 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
HMGB1P24-202ENST00000615653 DNAJB2P25686 324 aa7.95□□□□□ -1.14
HMGB1P24-202ENST00000615653 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
HMGB1P24-202ENST00000615653 TTC24A2A3L6 582 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P24-202ENST00000615653 CFHP08603 1231 aa7.94□□□□□ -1.14
HMGB1P24-202ENST00000615653 GMPRP36959 345 aa7.94□□□□□ -1.14
HMGB1P24-202ENST00000615653 SCUBE3Q8IX30 993 aa7.94□□□□□ -1.14
HMGB1P24-202ENST00000615653 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P24-202ENST00000615653 SMPD1P17405 629 aa7.93□□□□□ -1.14
HMGB1P24-202ENST00000615653 TMEM134Q9H6X4 195 aa7.93□□□□□ -1.14
HMGB1P24-202ENST00000615653 SPSB2Q99619 263 aa7.91□□□□□ -1.14
HMGB1P24-202ENST00000615653 NXF1Q9UBU9 619 aaKnown RBP7.91□□□□□ -1.14
HMGB1P24-202ENST00000615653 SLC10A3P09131 477 aa7.9□□□□□ -1.14
HMGB1P24-202ENST00000615653 NPAS3Q8IXF0 933 aa7.9□□□□□ -1.14
HMGB1P24-202ENST00000615653 FCF1Q9Y324 198 aaKnown RBP7.9□□□□□ -1.14
HMGB1P24-202ENST00000615653 SNIP1Q8TAD8 396 aaKnown RBP7.89□□□□□ -1.15
HMGB1P24-202ENST00000615653 IRF7Q92985 503 aa7.89□□□□□ -1.15
HMGB1P24-202ENST00000615653 WNT7AO00755 349 aa7.87□□□□□ -1.15
HMGB1P24-202ENST00000615653 RBM46Q8TBY0 533 aaKnown RBP7.86□□□□□ -1.15
HMGB1P24-202ENST00000615653 RCCD1A6NED2 376 aa7.85□□□□□ -1.15
HMGB1P24-202ENST00000615653 KCNMA1Q12791 1236 aa7.84□□□□□ -1.15
HMGB1P24-202ENST00000615653 PUS10Q3MIT2 529 aaKnown RBP7.84□□□□□ -1.15
HMGB1P24-202ENST00000615653 H3BM21 787 aa7.83□□□□□ -1.16
HMGB1P24-202ENST00000615653 J3QL48 77 aa7.83□□□□□ -1.16
HMGB1P24-202ENST00000615653 E2F4Q16254 413 aa7.83□□□□□ -1.16
HMGB1P24-202ENST00000615653 KCTD17Q8N5Z5 321 aa7.83□□□□□ -1.16
HMGB1P24-202ENST00000615653 ADGRG1Q9Y653 693 aa7.83□□□□□ -1.16
HMGB1P24-202ENST00000615653 GSK3AP49840 483 aa7.82□□□□□ -1.16
HMGB1P24-202ENST00000615653 HPS1Q92902 700 aa7.82□□□□□ -1.16
HMGB1P24-202ENST00000615653 THAP11Q96EK4 314 aa7.82□□□□□ -1.16
HMGB1P24-202ENST00000615653 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P24-202ENST00000615653 ERBB4Q15303 1308 aa7.8□□□□□ -1.16
HMGB1P24-202ENST00000615653 FAM160A2Q8N612 972 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P24-202ENST00000615653 MRGPRX2Q96LB1 330 aa7.8□□□□□ -1.16
HMGB1P24-202ENST00000615653 VEGFBP49765 207 aa7.77□□□□□ -1.17
HMGB1P24-202ENST00000615653 MORN1Q5T089 497 aa7.77□□□□□ -1.17
HMGB1P24-202ENST00000615653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.76□□□□□ -1.17
HMGB1P24-202ENST00000615653 FMNL1O95466 1100 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P24-202ENST00000615653 TRIM32Q13049 653 aa7.75□□□□□ -1.17
HMGB1P24-202ENST00000615653 PTGDRQ13258 359 aa7.75□□□□□ -1.17
HMGB1P24-202ENST00000615653 REPIN1Q9BWE0 567 aaKnown RBP7.75□□□□□ -1.17
HMGB1P24-202ENST00000615653 RSPH4AQ5TD94 716 aa7.74□□□□□ -1.17
HMGB1P24-202ENST00000615653 PRDM9Q9NQV7 894 aa7.74□□□□□ -1.17
HMGB1P24-202ENST00000615653 SALL2Q9Y467 1007 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P24-202ENST00000615653 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
HMGB1P24-202ENST00000615653 TMEM151AQ8N4L1 468 aa7.73□□□□□ -1.17
HMGB1P24-202ENST00000615653 FAM161AQ3B820 660 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms