RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 PANK1Q8TE04 598 aa12.03□□□□□ -0.48
SHTN1-207ENST00000615301 REC8O95072 547 aa12.03□□□□□ -0.48
SHTN1-207ENST00000615301 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
SHTN1-207ENST00000615301 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
SHTN1-207ENST00000615301 C22orf23Q9BZE7 217 aa12.03□□□□□ -0.48
SHTN1-207ENST00000615301 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
SHTN1-207ENST00000615301 RAD21O60216 631 aa12.02□□□□□ -0.48
SHTN1-207ENST00000615301 MPNDQ8N594 471 aa12.02□□□□□ -0.49
SHTN1-207ENST00000615301 ZKSCAN1P17029 563 aaPredicted RBP12.01□□□□□ -0.49
SHTN1-207ENST00000615301 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 TEX35Q5T0J7 233 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 G3V3G9 751 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
SHTN1-207ENST00000615301 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 CCDC70Q6NSX1 233 aa12.01□□□□□ -0.49
SHTN1-207ENST00000615301 KDM4AO75164 1064 aa12□□□□□ -0.49
SHTN1-207ENST00000615301 CPLX1O14810 134 aa12□□□□□ -0.49
SHTN1-207ENST00000615301 APPP05067 770 aa12□□□□□ -0.49
SHTN1-207ENST00000615301 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
SHTN1-207ENST00000615301 MNS1Q8NEH6 495 aa12□□□□□ -0.49
SHTN1-207ENST00000615301 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
SHTN1-207ENST00000615301 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
SHTN1-207ENST00000615301 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
SHTN1-207ENST00000615301 USP47Q96K76 1375 aa11.99□□□□□ -0.49
SHTN1-207ENST00000615301 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
SHTN1-207ENST00000615301 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
SHTN1-207ENST00000615301 FHOD3Q2V2M9 1422 aa11.99□□□□□ -0.49
SHTN1-207ENST00000615301 RIPK4P57078 832 aa11.99□□□□□ -0.49
SHTN1-207ENST00000615301 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
SHTN1-207ENST00000615301 CAVIN1Q6NZI2 390 aaKnown RBP11.99□□□□□ -0.49
SHTN1-207ENST00000615301 SYNE3Q6ZMZ3 975 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
SHTN1-207ENST00000615301 TPM2P07951 284 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 TRAK2O60296 914 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 TRIM29Q14134 588 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 TTLL5Q6EMB2 1281 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 MRE11P49959 708 aa11.98□□□□□ -0.49
SHTN1-207ENST00000615301 TDRD9Q8NDG6 1382 aaKnown RBP11.98□□□□□ -0.49
SHTN1-207ENST00000615301 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
SHTN1-207ENST00000615301 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
SHTN1-207ENST00000615301 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
SHTN1-207ENST00000615301 NUCB2P80303 420 aa11.97□□□□□ -0.49
SHTN1-207ENST00000615301 FKBP5Q13451 457 aaPredicted RBP11.97□□□□□ -0.49
SHTN1-207ENST00000615301 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
SHTN1-207ENST00000615301 CPLX2Q6PUV4 134 aaKnown RBP11.96□□□□□ -0.49
SHTN1-207ENST00000615301 NAP1L1P55209 391 aaKnown RBP11.96□□□□□ -0.49
SHTN1-207ENST00000615301 TEFQ10587 303 aa11.96□□□□□ -0.5
SHTN1-207ENST00000615301 SKIDA1Q1XH10 827 aa11.96□□□□□ -0.5
SHTN1-207ENST00000615301 PDILTQ8N807 584 aa11.96□□□□□ -0.5
SHTN1-207ENST00000615301 COG3Q96JB2 828 aa11.96□□□□□ -0.5
SHTN1-207ENST00000615301 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
SHTN1-207ENST00000615301 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
SHTN1-207ENST00000615301 DHX16O60231 1041 aaKnown RBP11.95□□□□□ -0.5
SHTN1-207ENST00000615301 CCDC73Q6ZRK6 1079 aa11.95□□□□□ -0.5
SHTN1-207ENST00000615301 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
SHTN1-207ENST00000615301 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.94□□□□□ -0.5
SHTN1-207ENST00000615301 HMOX1P09601 288 aa11.94□□□□□ -0.5
SHTN1-207ENST00000615301 PRPF40AO75400 957 aaKnown RBP11.94□□□□□ -0.5
SHTN1-207ENST00000615301 ARGLU1Q9NWB6 273 aaPredicted RBP11.94□□□□□ -0.5
SHTN1-207ENST00000615301 ANKRD20A12PQ8NF67 263 aa11.94□□□□□ -0.5
SHTN1-207ENST00000615301 FMNL2Q96PY5 1086 aa11.94□□□□□ -0.5
SHTN1-207ENST00000615301 RUFY1Q96T51 708 aa11.94□□□□□ -0.5
SHTN1-207ENST00000615301 CCDC39Q9UFE4 941 aa11.93□□□□□ -0.5
SHTN1-207ENST00000615301 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
SHTN1-207ENST00000615301 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
SHTN1-207ENST00000615301 DIAPH1O60610 1272 aaKnown RBP11.93□□□□□ -0.5
SHTN1-207ENST00000615301 API5Q9BZZ5 524 aaKnown RBP11.93□□□□□ -0.5
SHTN1-207ENST00000615301 SPC24Q8NBT2 197 aa11.93□□□□□ -0.5
SHTN1-207ENST00000615301 HSP90B2PQ58FF3 399 aa11.93□□□□□ -0.5
SHTN1-207ENST00000615301 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
SHTN1-207ENST00000615301 TRIM5Q9C035 493 aa11.92□□□□□ -0.5
SHTN1-207ENST00000615301 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
SHTN1-207ENST00000615301 KIF7Q2M1P5 1343 aa11.91□□□□□ -0.5
SHTN1-207ENST00000615301 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
SHTN1-207ENST00000615301 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
SHTN1-207ENST00000615301 G3BP1Q13283 466 aaKnown RBP eCLIP11.91□□□□□ -0.5
SHTN1-207ENST00000615301 TRDNQ13061 729 aa11.91□□□□□ -0.5
SHTN1-207ENST00000615301 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
SHTN1-207ENST00000615301 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
SHTN1-207ENST00000615301 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
SHTN1-207ENST00000615301 FIBPO43427 364 aa11.9□□□□□ -0.5
SHTN1-207ENST00000615301 CDC45O75419 566 aa11.9□□□□□ -0.5
SHTN1-207ENST00000615301 ATP2B1P20020 1258 aa11.9□□□□□ -0.5
SHTN1-207ENST00000615301 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
SHTN1-207ENST00000615301 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.5
SHTN1-207ENST00000615301 ADAMTS8Q9UP79 889 aa11.9□□□□□ -0.5
SHTN1-207ENST00000615301 H0YHG0 523 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 CALRP27797 417 aaKnown RBP11.89□□□□□ -0.51
SHTN1-207ENST00000615301 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
SHTN1-207ENST00000615301 NEK4P51957 841 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 AK7Q96M32 723 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 AIMP1Q12904 312 aaKnown RBP11.89□□□□□ -0.51
SHTN1-207ENST00000615301 TTC5Q8N0Z6 440 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 EVC2Q86UK5 1308 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms