RNA–Protein interactions for RNA: ENST00000614721.1

ACSM3-215, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best)

Gene ACSM3, Length 3,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-215ENST00000614721 RNF17Q9BXT8 1623 aaKnown RBP11.87□□□□□ -0.51
ACSM3-215ENST00000614721 PRKRIP1Q9H875 184 aaPredicted RBP11.87□□□□□ -0.51
ACSM3-215ENST00000614721 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
ACSM3-215ENST00000614721 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
ACSM3-215ENST00000614721 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
ACSM3-215ENST00000614721 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
ACSM3-215ENST00000614721 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
ACSM3-215ENST00000614721 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
ACSM3-215ENST00000614721 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
ACSM3-215ENST00000614721 BCORL1Q5H9F3 1711 aa11.86□□□□□ -0.51
ACSM3-215ENST00000614721 PHF23Q9BUL5 403 aaPredicted RBP11.85□□□□□ -0.51
ACSM3-215ENST00000614721 HNRNPUQ00839 825 aaKnown RBP eCLIP11.85□□□□□ -0.51
ACSM3-215ENST00000614721 POGKQ9P215 609 aa11.85□□□□□ -0.51
ACSM3-215ENST00000614721 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
ACSM3-215ENST00000614721 WAPLQ7Z5K2 1190 aa11.84□□□□□ -0.51
ACSM3-215ENST00000614721 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
ACSM3-215ENST00000614721 C14orf93Q9H972 538 aaKnown RBP11.83□□□□□ -0.52
ACSM3-215ENST00000614721 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
ACSM3-215ENST00000614721 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
ACSM3-215ENST00000614721 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
ACSM3-215ENST00000614721 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
ACSM3-215ENST00000614721 PRAM1Q96QH2 718 aa11.82□□□□□ -0.52
ACSM3-215ENST00000614721 ZMYM4Q5VZL5 1548 aa11.82□□□□□ -0.52
ACSM3-215ENST00000614721 CLTCQ00610 1675 aaKnown RBP11.82□□□□□ -0.52
ACSM3-215ENST00000614721 CENPJQ9HC77 1338 aaPredicted RBP11.82□□□□□ -0.52
ACSM3-215ENST00000614721 TXNDC2Q86VQ3 553 aa11.81□□□□□ -0.52
ACSM3-215ENST00000614721 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
ACSM3-215ENST00000614721 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
ACSM3-215ENST00000614721 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
ACSM3-215ENST00000614721 SYNMO15061 1565 aa11.81□□□□□ -0.52
ACSM3-215ENST00000614721 LMTK2Q8IWU2 1503 aa11.8□□□□□ -0.52
ACSM3-215ENST00000614721 KIF1BO60333 1816 aa11.8□□□□□ -0.52
ACSM3-215ENST00000614721 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
ACSM3-215ENST00000614721 ERVK-7P63135 1459 aa11.79□□□□□ -0.52
ACSM3-215ENST00000614721 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
ACSM3-215ENST00000614721 LTKP29376 864 aa11.79□□□□□ -0.52
ACSM3-215ENST00000614721 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
ACSM3-215ENST00000614721 TNRQ92752 1358 aa11.78□□□□□ -0.52
ACSM3-215ENST00000614721 ARHGEF40Q8TER5 1519 aa11.78□□□□□ -0.52
ACSM3-215ENST00000614721 SCAF11Q99590 1463 aaKnown RBP11.77□□□□□ -0.52
ACSM3-215ENST00000614721 RPGRIP1LQ68CZ1 1315 aa11.77□□□□□ -0.53
ACSM3-215ENST00000614721 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
ACSM3-215ENST00000614721 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
ACSM3-215ENST00000614721 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
ACSM3-215ENST00000614721 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
ACSM3-215ENST00000614721 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
ACSM3-215ENST00000614721 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
ACSM3-215ENST00000614721 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
ACSM3-215ENST00000614721 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
ACSM3-215ENST00000614721 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
ACSM3-215ENST00000614721 RIMS2Q9UQ26 1411 aa11.75□□□□□ -0.53
ACSM3-215ENST00000614721 MYO5BQ9ULV0 1848 aa11.75□□□□□ -0.53
ACSM3-215ENST00000614721 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
ACSM3-215ENST00000614721 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
ACSM3-215ENST00000614721 PREX1Q8TCU6 1659 aa11.73□□□□□ -0.53
ACSM3-215ENST00000614721 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
ACSM3-215ENST00000614721 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
ACSM3-215ENST00000614721 AGLP35573 1532 aa11.72□□□□□ -0.53
ACSM3-215ENST00000614721 PIK3C2BO00750 1634 aa11.72□□□□□ -0.53
ACSM3-215ENST00000614721 PLEKHH1Q9ULM0 1364 aa11.72□□□□□ -0.53
ACSM3-215ENST00000614721 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
ACSM3-215ENST00000614721 CARD14Q9BXL6 1004 aa11.71□□□□□ -0.53
ACSM3-215ENST00000614721 METP08581 1390 aa11.71□□□□□ -0.53
ACSM3-215ENST00000614721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.71□□□□□ -0.53
ACSM3-215ENST00000614721 KTN1Q86UP2 1357 aaKnown RBP11.71□□□□□ -0.54
ACSM3-215ENST00000614721 FBLN1P23142 703 aa11.71□□□□□ -0.54
ACSM3-215ENST00000614721 SOX12O15370 315 aa11.7□□□□□ -0.54
ACSM3-215ENST00000614721 IRX6P78412 446 aaPredicted RBP11.7□□□□□ -0.54
ACSM3-215ENST00000614721 CDK19Q9BWU1 502 aa11.7□□□□□ -0.54
ACSM3-215ENST00000614721 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
ACSM3-215ENST00000614721 MYOM2P54296 1465 aa11.7□□□□□ -0.54
ACSM3-215ENST00000614721 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
ACSM3-215ENST00000614721 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
ACSM3-215ENST00000614721 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
ACSM3-215ENST00000614721 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
ACSM3-215ENST00000614721 HSPA2P54652 639 aa11.69□□□□□ -0.54
ACSM3-215ENST00000614721 THEMISQ8N1K5 641 aaPredicted RBP11.68□□□□□ -0.54
ACSM3-215ENST00000614721 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
ACSM3-215ENST00000614721 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.68□□□□□ -0.54
ACSM3-215ENST00000614721 TMEM2Q9UHN6 1383 aa11.68□□□□□ -0.54
ACSM3-215ENST00000614721 YTHDC2Q9H6S0 1430 aaKnown RBP11.68□□□□□ -0.54
ACSM3-215ENST00000614721 TMEM131LA2VDJ0 1609 aa11.67□□□□□ -0.54
ACSM3-215ENST00000614721 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
ACSM3-215ENST00000614721 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
ACSM3-215ENST00000614721 AMOTL2Q9Y2J4 779 aa11.66□□□□□ -0.54
ACSM3-215ENST00000614721 ZC3H13Q5T200 1668 aaKnown RBP11.66□□□□□ -0.54
ACSM3-215ENST00000614721 PPLO60437 1756 aa11.66□□□□□ -0.54
ACSM3-215ENST00000614721 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
ACSM3-215ENST00000614721 RALBP1Q15311 655 aa11.65□□□□□ -0.54
ACSM3-215ENST00000614721 MORC1Q86VD1 984 aa11.65□□□□□ -0.54
ACSM3-215ENST00000614721 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
ACSM3-215ENST00000614721 NLRP13Q86W25 1043 aa11.65□□□□□ -0.55
ACSM3-215ENST00000614721 PMFBP1Q8TBY8 1022 aa11.65□□□□□ -0.55
ACSM3-215ENST00000614721 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
ACSM3-215ENST00000614721 NRXN1Q9ULB1 1477 aa11.64□□□□□ -0.55
ACSM3-215ENST00000614721 ADGRB1O14514 1584 aa11.64□□□□□ -0.55
ACSM3-215ENST00000614721 REREQ9P2R6 1566 aa11.64□□□□□ -0.55
ACSM3-215ENST00000614721 SPATA31D1Q6ZQQ2 1576 aa11.63□□□□□ -0.55
ACSM3-215ENST00000614721 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
ACSM3-215ENST00000614721 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms