RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 SYNMO15061 1565 aa13.7□□□□□ -0.22
GGA3-221ENST00000614198 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
GGA3-221ENST00000614198 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
GGA3-221ENST00000614198 NOS1P29475 1434 aa13.68□□□□□ -0.22
GGA3-221ENST00000614198 RALGAPBQ86X10 1494 aa13.68□□□□□ -0.22
GGA3-221ENST00000614198 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
GGA3-221ENST00000614198 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
GGA3-221ENST00000614198 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
GGA3-221ENST00000614198 KIF1BO60333 1816 aa13.66□□□□□ -0.22
GGA3-221ENST00000614198 FANCIQ9NVI1 1328 aa13.66□□□□□ -0.22
GGA3-221ENST00000614198 CCDC136Q96JN2 1154 aa13.65□□□□□ -0.22
GGA3-221ENST00000614198 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
GGA3-221ENST00000614198 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
GGA3-221ENST00000614198 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
GGA3-221ENST00000614198 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
GGA3-221ENST00000614198 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
GGA3-221ENST00000614198 PREX1Q8TCU6 1659 aa13.62□□□□□ -0.23
GGA3-221ENST00000614198 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
GGA3-221ENST00000614198 SENP3-EIF4A1A0A087X0R7 540 aa13.62□□□□□ -0.23
GGA3-221ENST00000614198 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
GGA3-221ENST00000614198 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
GGA3-221ENST00000614198 CNTLNQ9NXG0 1405 aa13.61□□□□□ -0.23
GGA3-221ENST00000614198 TESK2Q96S53 571 aa13.61□□□□□ -0.23
GGA3-221ENST00000614198 STK26Q9P289 416 aa13.61□□□□□ -0.23
GGA3-221ENST00000614198 ADGRB3O60242 1522 aa13.6□□□□□ -0.23
GGA3-221ENST00000614198 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
GGA3-221ENST00000614198 AGLP35573 1532 aa13.59□□□□□ -0.23
GGA3-221ENST00000614198 PIK3C2BO00750 1634 aa13.58□□□□□ -0.23
GGA3-221ENST00000614198 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
GGA3-221ENST00000614198 ANP32CO43423 234 aa13.57□□□□□ -0.24
GGA3-221ENST00000614198 ZC3H13Q5T200 1668 aaKnown RBP13.57□□□□□ -0.24
GGA3-221ENST00000614198 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
GGA3-221ENST00000614198 REREQ9P2R6 1566 aa13.56□□□□□ -0.24
GGA3-221ENST00000614198 PPLO60437 1756 aa13.56□□□□□ -0.24
GGA3-221ENST00000614198 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
GGA3-221ENST00000614198 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
GGA3-221ENST00000614198 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
GGA3-221ENST00000614198 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
GGA3-221ENST00000614198 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
GGA3-221ENST00000614198 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
GGA3-221ENST00000614198 SALL2Q9Y467 1007 aaPredicted RBP13.53□□□□□ -0.24
GGA3-221ENST00000614198 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
GGA3-221ENST00000614198 C14orf93Q9H972 538 aaKnown RBP13.52□□□□□ -0.24
GGA3-221ENST00000614198 VGFO15240 615 aaPredicted RBP13.51□□□□□ -0.25
GGA3-221ENST00000614198 MYOM2P54296 1465 aa13.5□□□□□ -0.25
GGA3-221ENST00000614198 A2ML1A8K2U0 1454 aa13.5□□□□□ -0.25
GGA3-221ENST00000614198 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
GGA3-221ENST00000614198 NRXN1Q9ULB1 1477 aa13.49□□□□□ -0.25
GGA3-221ENST00000614198 IQGAP1P46940 1657 aa13.49□□□□□ -0.25
GGA3-221ENST00000614198 PANK3Q9H999 370 aa13.49□□□□□ -0.25
GGA3-221ENST00000614198 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
GGA3-221ENST00000614198 LTKP29376 864 aa13.49□□□□□ -0.25
GGA3-221ENST00000614198 CC2D1BQ5T0F9 858 aaKnown RBP13.49□□□□□ -0.25
GGA3-221ENST00000614198 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
GGA3-221ENST00000614198 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
GGA3-221ENST00000614198 TNRQ92752 1358 aa13.48□□□□□ -0.25
GGA3-221ENST00000614198 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.48□□□□□ -0.25
GGA3-221ENST00000614198 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
GGA3-221ENST00000614198 TMF1P82094 1093 aa13.48□□□□□ -0.25
GGA3-221ENST00000614198 WAPLQ7Z5K2 1190 aa13.48□□□□□ -0.25
GGA3-221ENST00000614198 SLC26A8Q96RN1 970 aa13.46□□□□□ -0.25
GGA3-221ENST00000614198 ADGRB1O14514 1584 aa13.46□□□□□ -0.25
GGA3-221ENST00000614198 C3P01024 1663 aa13.46□□□□□ -0.25
GGA3-221ENST00000614198 FER1L4A9Z1Z3 1794 aa13.46□□□□□ -0.25
GGA3-221ENST00000614198 RIMS2Q9UQ26 1411 aa13.46□□□□□ -0.25
GGA3-221ENST00000614198 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.26
GGA3-221ENST00000614198 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
GGA3-221ENST00000614198 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
GGA3-221ENST00000614198 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
GGA3-221ENST00000614198 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
GGA3-221ENST00000614198 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
GGA3-221ENST00000614198 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
GGA3-221ENST00000614198 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
GGA3-221ENST00000614198 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
GGA3-221ENST00000614198 NEURL4Q96JN8 1562 aa13.44□□□□□ -0.26
GGA3-221ENST00000614198 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
GGA3-221ENST00000614198 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
GGA3-221ENST00000614198 METP08581 1390 aa13.43□□□□□ -0.26
GGA3-221ENST00000614198 LAMC1P11047 1609 aa13.43□□□□□ -0.26
GGA3-221ENST00000614198 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
GGA3-221ENST00000614198 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
GGA3-221ENST00000614198 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
GGA3-221ENST00000614198 PTPRMP28827 1452 aa13.42□□□□□ -0.26
GGA3-221ENST00000614198 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
GGA3-221ENST00000614198 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
GGA3-221ENST00000614198 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
GGA3-221ENST00000614198 STAC3Q96MF2 364 aa13.42□□□□□ -0.26
GGA3-221ENST00000614198 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
GGA3-221ENST00000614198 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
GGA3-221ENST00000614198 NBR1Q14596 966 aa13.41□□□□□ -0.26
GGA3-221ENST00000614198 KIAA1210Q9ULL0 1709 aa13.4□□□□□ -0.26
GGA3-221ENST00000614198 NUTM2FA1L443 756 aa13.4□□□□□ -0.26
GGA3-221ENST00000614198 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
GGA3-221ENST00000614198 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
GGA3-221ENST00000614198 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
GGA3-221ENST00000614198 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
GGA3-221ENST00000614198 POGKQ9P215 609 aa13.39□□□□□ -0.27
GGA3-221ENST00000614198 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
GGA3-221ENST00000614198 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
GGA3-221ENST00000614198 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms