RNA–Protein interactions for RNA: ENST00000614061.1

AC004477.3-201, humanhuman

BASIC

Gene AC004477.3, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.3-201ENST00000614061 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
AC004477.3-201ENST00000614061 SMAPO00193 183 aa11.29□□□□□ -0.6
AC004477.3-201ENST00000614061 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC004477.3-201ENST00000614061 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
AC004477.3-201ENST00000614061 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
AC004477.3-201ENST00000614061 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
AC004477.3-201ENST00000614061 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
AC004477.3-201ENST00000614061 TK2O00142 265 aa11.27□□□□□ -0.61
AC004477.3-201ENST00000614061 MDM2Q00987 491 aaPredicted RBP11.27□□□□□ -0.61
AC004477.3-201ENST00000614061 WDR62O43379 1518 aa11.26□□□□□ -0.61
AC004477.3-201ENST00000614061 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
AC004477.3-201ENST00000614061 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
AC004477.3-201ENST00000614061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
AC004477.3-201ENST00000614061 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
AC004477.3-201ENST00000614061 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
AC004477.3-201ENST00000614061 BHMG1C9JSJ3 638 aaPredicted RBP11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 CLCN1P35523 988 aa11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
AC004477.3-201ENST00000614061 POTEMA6NI47 508 aa11.23□□□□□ -0.61
AC004477.3-201ENST00000614061 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
AC004477.3-201ENST00000614061 DNAJB2P25686 324 aa11.22□□□□□ -0.61
AC004477.3-201ENST00000614061 HRO43593 1189 aa11.21□□□□□ -0.61
AC004477.3-201ENST00000614061 ANKRD13DQ6ZTN6 518 aa11.21□□□□□ -0.61
AC004477.3-201ENST00000614061 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
AC004477.3-201ENST00000614061 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
AC004477.3-201ENST00000614061 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
AC004477.3-201ENST00000614061 MS4A1P11836 297 aa11.19□□□□□ -0.62
AC004477.3-201ENST00000614061 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
AC004477.3-201ENST00000614061 DAXXQ9UER7 740 aaPredicted RBP11.19□□□□□ -0.62
AC004477.3-201ENST00000614061 LAPTM4BQ86VI4 370 aa11.18□□□□□ -0.62
AC004477.3-201ENST00000614061 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
AC004477.3-201ENST00000614061 WIZO95785 1651 aa11.17□□□□□ -0.62
AC004477.3-201ENST00000614061 SSTR3P32745 418 aaPredicted RBP11.17□□□□□ -0.62
AC004477.3-201ENST00000614061 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
AC004477.3-201ENST00000614061 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
AC004477.3-201ENST00000614061 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
AC004477.3-201ENST00000614061 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
AC004477.3-201ENST00000614061 TMEM132AQ24JP5 1023 aa11.14□□□□□ -0.63
AC004477.3-201ENST00000614061 SWT1Q5T5J6 900 aaKnown RBP11.14□□□□□ -0.63
AC004477.3-201ENST00000614061 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
AC004477.3-201ENST00000614061 PLEKHG3A1L390 1219 aa11.13□□□□□ -0.63
AC004477.3-201ENST00000614061 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
AC004477.3-201ENST00000614061 ZFRQ96KR1 1074 aaKnown RBP11.12□□□□□ -0.63
AC004477.3-201ENST00000614061 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
AC004477.3-201ENST00000614061 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
AC004477.3-201ENST00000614061 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
AC004477.3-201ENST00000614061 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
AC004477.3-201ENST00000614061 DDX11L8A8MPP1 907 aa11.1□□□□□ -0.63
AC004477.3-201ENST00000614061 CD46P15529 392 aa11.09□□□□□ -0.63
AC004477.3-201ENST00000614061 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
AC004477.3-201ENST00000614061 BEGAINQ9BUH8 593 aa11.09□□□□□ -0.63
AC004477.3-201ENST00000614061 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
AC004477.3-201ENST00000614061 HDGFP51858 240 aaKnown RBP11.08□□□□□ -0.64
AC004477.3-201ENST00000614061 STAC3Q96MF2 364 aa11.08□□□□□ -0.64
AC004477.3-201ENST00000614061 SLC10A3P09131 477 aa11.07□□□□□ -0.64
AC004477.3-201ENST00000614061 CFTRP13569 1480 aa11.06□□□□□ -0.64
AC004477.3-201ENST00000614061 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
AC004477.3-201ENST00000614061 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
AC004477.3-201ENST00000614061 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
AC004477.3-201ENST00000614061 ANKK1Q8NFD2 765 aa11.04□□□□□ -0.64
AC004477.3-201ENST00000614061 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
AC004477.3-201ENST00000614061 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
AC004477.3-201ENST00000614061 ARHGEF11O15085 1522 aa11.03□□□□□ -0.64
AC004477.3-201ENST00000614061 WNT2BQ93097 391 aa11.02□□□□□ -0.65
AC004477.3-201ENST00000614061 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
AC004477.3-201ENST00000614061 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
AC004477.3-201ENST00000614061 RNF40O75150 1001 aa11.01□□□□□ -0.65
AC004477.3-201ENST00000614061 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
AC004477.3-201ENST00000614061 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
AC004477.3-201ENST00000614061 GCGRP47871 477 aa11□□□□□ -0.65
AC004477.3-201ENST00000614061 BCAMP50895 628 aa11□□□□□ -0.65
AC004477.3-201ENST00000614061 TBC1D2Q9BYX2 928 aa11□□□□□ -0.65
AC004477.3-201ENST00000614061 SPIRE2Q8WWL2 714 aa10.99□□□□□ -0.65
AC004477.3-201ENST00000614061 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
AC004477.3-201ENST00000614061 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
AC004477.3-201ENST00000614061 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
AC004477.3-201ENST00000614061 TOP2AP11388 1531 aaKnown RBP10.98□□□□□ -0.65
AC004477.3-201ENST00000614061 CFHP08603 1231 aa10.97□□□□□ -0.65
AC004477.3-201ENST00000614061 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
AC004477.3-201ENST00000614061 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
AC004477.3-201ENST00000614061 RSPH6AQ9H0K4 717 aa10.97□□□□□ -0.65
AC004477.3-201ENST00000614061 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
AC004477.3-201ENST00000614061 PRDM2Q13029 1718 aa10.96□□□□□ -0.65
AC004477.3-201ENST00000614061 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
AC004477.3-201ENST00000614061 NUTM1Q86Y26 1132 aa10.96□□□□□ -0.65
AC004477.3-201ENST00000614061 KDM4AO75164 1064 aa10.95□□□□□ -0.66
AC004477.3-201ENST00000614061 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
AC004477.3-201ENST00000614061 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
AC004477.3-201ENST00000614061 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
AC004477.3-201ENST00000614061 TSR3Q9UJK0 312 aaKnown RBP10.95□□□□□ -0.66
AC004477.3-201ENST00000614061 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
AC004477.3-201ENST00000614061 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
AC004477.3-201ENST00000614061 SKIV2LQ15477 1246 aaKnown RBP10.94□□□□□ -0.66
AC004477.3-201ENST00000614061 PPP4CP60510 307 aa10.93□□□□□ -0.66
AC004477.3-201ENST00000614061 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
AC004477.3-201ENST00000614061 POLR3EQ9NVU0 708 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms