RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
TRAK1-210ENST00000613405 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
TRAK1-210ENST00000613405 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
TRAK1-210ENST00000613405 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
TRAK1-210ENST00000613405 EHBP1L1Q8N3D4 1523 aa16.42■□□□□ 0.22
TRAK1-210ENST00000613405 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
TRAK1-210ENST00000613405 PHF14O94880 888 aa16.41■□□□□ 0.22
TRAK1-210ENST00000613405 NAIPQ13075 1403 aa16.41■□□□□ 0.22
TRAK1-210ENST00000613405 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
TRAK1-210ENST00000613405 CDCA7LQ96GN5 454 aa16.4■□□□□ 0.22
TRAK1-210ENST00000613405 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
TRAK1-210ENST00000613405 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
TRAK1-210ENST00000613405 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
TRAK1-210ENST00000613405 ADAMTS8Q9UP79 889 aa16.4■□□□□ 0.22
TRAK1-210ENST00000613405 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 COG3Q96JB2 828 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
TRAK1-210ENST00000613405 CCDC184Q52MB2 194 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
TRAK1-210ENST00000613405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAK1-210ENST00000613405 ARHGAP5Q13017 1502 aa16.38■□□□□ 0.21
TRAK1-210ENST00000613405 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
TRAK1-210ENST00000613405 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
TRAK1-210ENST00000613405 SNAPC4Q5SXM2 1469 aa16.37■□□□□ 0.21
TRAK1-210ENST00000613405 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
TRAK1-210ENST00000613405 FOXD4L6Q3SYB3 417 aaPredicted RBP16.36■□□□□ 0.21
TRAK1-210ENST00000613405 FOXD4L3Q6VB84 417 aaPredicted RBP16.36■□□□□ 0.21
TRAK1-210ENST00000613405 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
TRAK1-210ENST00000613405 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
TRAK1-210ENST00000613405 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
TRAK1-210ENST00000613405 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
TRAK1-210ENST00000613405 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
TRAK1-210ENST00000613405 MRE11P49959 708 aa16.35■□□□□ 0.21
TRAK1-210ENST00000613405 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
TRAK1-210ENST00000613405 DAPK1P53355 1430 aa16.35■□□□□ 0.21
TRAK1-210ENST00000613405 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
TRAK1-210ENST00000613405 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
TRAK1-210ENST00000613405 EPRSP07814 1512 aaKnown RBP16.34■□□□□ 0.21
TRAK1-210ENST00000613405 TNNT3P45378 269 aaPredicted RBP16.34■□□□□ 0.21
TRAK1-210ENST00000613405 RIPK4P57078 832 aa16.34■□□□□ 0.21
TRAK1-210ENST00000613405 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
TRAK1-210ENST00000613405 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
TRAK1-210ENST00000613405 RUNDC1Q96C34 613 aa16.33■□□□□ 0.21
TRAK1-210ENST00000613405 CABP2Q9NPB3 220 aa16.33■□□□□ 0.21
TRAK1-210ENST00000613405 CHMP4AQ9BY43 222 aa16.33■□□□□ 0.2
TRAK1-210ENST00000613405 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
TRAK1-210ENST00000613405 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
TRAK1-210ENST00000613405 NPHP1O15259 732 aa16.32■□□□□ 0.2
TRAK1-210ENST00000613405 MTHFSP49914 203 aa16.32■□□□□ 0.2
TRAK1-210ENST00000613405 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
TRAK1-210ENST00000613405 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
TRAK1-210ENST00000613405 TRAK2O60296 914 aa16.31■□□□□ 0.2
TRAK1-210ENST00000613405 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
TRAK1-210ENST00000613405 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
TRAK1-210ENST00000613405 HECW1Q76N89 1606 aa16.29■□□□□ 0.2
TRAK1-210ENST00000613405 KIF16BQ96L93 1317 aa16.29■□□□□ 0.2
TRAK1-210ENST00000613405 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
TRAK1-210ENST00000613405 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
TRAK1-210ENST00000613405 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
TRAK1-210ENST00000613405 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
TRAK1-210ENST00000613405 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
TRAK1-210ENST00000613405 TPM4P67936 248 aa16.27■□□□□ 0.2
TRAK1-210ENST00000613405 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
TRAK1-210ENST00000613405 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.2
TRAK1-210ENST00000613405 HMOX1P09601 288 aa16.27■□□□□ 0.2
TRAK1-210ENST00000613405 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
TRAK1-210ENST00000613405 REC8O95072 547 aa16.27■□□□□ 0.19
TRAK1-210ENST00000613405 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.19
TRAK1-210ENST00000613405 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.19
TRAK1-210ENST00000613405 NUCB2P80303 420 aa16.26■□□□□ 0.19
TRAK1-210ENST00000613405 NASPP49321 788 aaPredicted RBP16.26■□□□□ 0.19
TRAK1-210ENST00000613405 AAMPQ13685 434 aa16.26■□□□□ 0.19
TRAK1-210ENST00000613405 MCTP1Q6DN14 999 aa16.25■□□□□ 0.19
TRAK1-210ENST00000613405 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
TRAK1-210ENST00000613405 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
TRAK1-210ENST00000613405 HSP90B1P14625 803 aaKnown RBP16.25■□□□□ 0.19
TRAK1-210ENST00000613405 ROCK1Q13464 1354 aa16.25■□□□□ 0.19
TRAK1-210ENST00000613405 R3HCC1Q9Y3T6 440 aaKnown RBP16.24■□□□□ 0.19
TRAK1-210ENST00000613405 ANKRD30BQ9BXX2 1392 aa16.24■□□□□ 0.19
TRAK1-210ENST00000613405 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
TRAK1-210ENST00000613405 CHMP3Q9Y3E7 222 aa16.23■□□□□ 0.19
TRAK1-210ENST00000613405 PLB1Q6P1J6 1458 aa16.23■□□□□ 0.19
TRAK1-210ENST00000613405 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
TRAK1-210ENST00000613405 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
TRAK1-210ENST00000613405 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
TRAK1-210ENST00000613405 TEFQ10587 303 aa16.21■□□□□ 0.19
TRAK1-210ENST00000613405 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAK1-210ENST00000613405 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
TRAK1-210ENST00000613405 ABCC5O15440 1437 aa16.21■□□□□ 0.19
TRAK1-210ENST00000613405 GOLGA6L19H0YKK7 550 aa16.21■□□□□ 0.18
TRAK1-210ENST00000613405 ZNF771Q7L3S4 317 aaPredicted RBP16.21■□□□□ 0.18
TRAK1-210ENST00000613405 PLEKHH2Q8IVE3 1493 aa16.2■□□□□ 0.18
TRAK1-210ENST00000613405 RAPGEF3O95398 923 aa16.2■□□□□ 0.18
TRAK1-210ENST00000613405 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
TRAK1-210ENST00000613405 NECTIN2Q92692 538 aa16.2■□□□□ 0.18
TRAK1-210ENST00000613405 BECN2A8MW95 431 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms