RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 ZMYND10O75800 440 aa10.36□□□□□ -0.75
CFDP1-211ENST00000612761 PPP4CP60510 307 aa10.36□□□□□ -0.75
CFDP1-211ENST00000612761 NYAP1Q6ZVC0 841 aa10.36□□□□□ -0.75
CFDP1-211ENST00000612761 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
CFDP1-211ENST00000612761 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
CFDP1-211ENST00000612761 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
CFDP1-211ENST00000612761 BARGINQ6ZT62 677 aa10.35□□□□□ -0.75
CFDP1-211ENST00000612761 KRI1Q8N9T8 703 aaKnown RBP10.34□□□□□ -0.75
CFDP1-211ENST00000612761 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
CFDP1-211ENST00000612761 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
CFDP1-211ENST00000612761 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
CFDP1-211ENST00000612761 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
CFDP1-211ENST00000612761 RSPH4AQ5TD94 716 aa10.27□□□□□ -0.77
CFDP1-211ENST00000612761 PRR14Q9BWN1 585 aa10.26□□□□□ -0.77
CFDP1-211ENST00000612761 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
CFDP1-211ENST00000612761 APLP1P51693 650 aa10.24□□□□□ -0.77
CFDP1-211ENST00000612761 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
CFDP1-211ENST00000612761 DDX11L8A8MPP1 907 aa10.23□□□□□ -0.77
CFDP1-211ENST00000612761 MDM2Q00987 491 aaPredicted RBP10.23□□□□□ -0.77
CFDP1-211ENST00000612761 SLC10A3P09131 477 aa10.22□□□□□ -0.77
CFDP1-211ENST00000612761 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
CFDP1-211ENST00000612761 RDH13Q8NBN7 331 aa10.22□□□□□ -0.77
CFDP1-211ENST00000612761 AK7Q96M32 723 aa10.22□□□□□ -0.77
CFDP1-211ENST00000612761 CFHP08603 1231 aa10.21□□□□□ -0.77
CFDP1-211ENST00000612761 CLCN1P35523 988 aa10.21□□□□□ -0.77
CFDP1-211ENST00000612761 ITGBL1O95965 494 aaPredicted RBP10.2□□□□□ -0.78
CFDP1-211ENST00000612761 GPCPD1Q9NPB8 672 aa10.2□□□□□ -0.78
CFDP1-211ENST00000612761 KCNC4Q03721 635 aa10.18□□□□□ -0.78
CFDP1-211ENST00000612761 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
CFDP1-211ENST00000612761 ACTN4O43707 911 aaKnown RBP10.17□□□□□ -0.78
CFDP1-211ENST00000612761 AMHR2Q16671 573 aa10.17□□□□□ -0.78
CFDP1-211ENST00000612761 IFFO2Q5TF58 517 aa10.17□□□□□ -0.78
CFDP1-211ENST00000612761 MTRQ99707 1265 aa10.17□□□□□ -0.78
CFDP1-211ENST00000612761 PCDHB3Q9Y5E6 796 aa10.17□□□□□ -0.78
CFDP1-211ENST00000612761 TRIM66O15016 1216 aa10.16□□□□□ -0.78
CFDP1-211ENST00000612761 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
CFDP1-211ENST00000612761 TJAP1Q5JTD0 557 aa10.16□□□□□ -0.78
CFDP1-211ENST00000612761 IL21Q9HBE4 155 aa10.16□□□□□ -0.78
CFDP1-211ENST00000612761 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
CFDP1-211ENST00000612761 CD46P15529 392 aa10.14□□□□□ -0.79
CFDP1-211ENST00000612761 GCGRP47871 477 aa10.14□□□□□ -0.79
CFDP1-211ENST00000612761 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
CFDP1-211ENST00000612761 COPS2P61201 443 aa10.13□□□□□ -0.79
CFDP1-211ENST00000612761 BLOC1S3Q6QNY0 202 aa10.12□□□□□ -0.79
CFDP1-211ENST00000612761 REPIN1Q9BWE0 567 aaKnown RBP10.12□□□□□ -0.79
CFDP1-211ENST00000612761 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
CFDP1-211ENST00000612761 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
CFDP1-211ENST00000612761 ZNF516Q92618 1163 aa10.1□□□□□ -0.79
CFDP1-211ENST00000612761 ZPR1O75312 459 aa10.09□□□□□ -0.79
CFDP1-211ENST00000612761 NR1I2O75469 434 aa10.09□□□□□ -0.79
CFDP1-211ENST00000612761 PDE4DQ08499 809 aa10.09□□□□□ -0.79
CFDP1-211ENST00000612761 FUT2Q10981 343 aa10.09□□□□□ -0.79
CFDP1-211ENST00000612761 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
CFDP1-211ENST00000612761 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
CFDP1-211ENST00000612761 GRIPAP1Q4V328 841 aa10.08□□□□□ -0.8
CFDP1-211ENST00000612761 KDM4AO75164 1064 aa10.07□□□□□ -0.8
CFDP1-211ENST00000612761 PUS10Q3MIT2 529 aaKnown RBP10.07□□□□□ -0.8
CFDP1-211ENST00000612761 A0A0G2JS52 829 aa10.06□□□□□ -0.8
CFDP1-211ENST00000612761 USP46P62068 366 aa10.05□□□□□ -0.8
CFDP1-211ENST00000612761 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
CFDP1-211ENST00000612761 MORN1Q5T089 497 aa10.05□□□□□ -0.8
CFDP1-211ENST00000612761 SCUBE3Q8IX30 993 aa10.05□□□□□ -0.8
CFDP1-211ENST00000612761 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
CFDP1-211ENST00000612761 NKX2-3Q8TAU0 364 aa10.03□□□□□ -0.8
CFDP1-211ENST00000612761 TLL1O43897 1013 aa10.01□□□□□ -0.81
CFDP1-211ENST00000612761 MS4A1P11836 297 aa10.01□□□□□ -0.81
CFDP1-211ENST00000612761 BEGAINQ9BUH8 593 aa10.01□□□□□ -0.81
CFDP1-211ENST00000612761 SLC27A5Q9Y2P5 690 aa10.01□□□□□ -0.81
CFDP1-211ENST00000612761 HOXA2O43364 376 aa9.99□□□□□ -0.81
CFDP1-211ENST00000612761 ADH1BP00325 375 aa9.99□□□□□ -0.81
CFDP1-211ENST00000612761 GGCXP38435 758 aa9.99□□□□□ -0.81
CFDP1-211ENST00000612761 SPSB2Q99619 263 aa9.99□□□□□ -0.81
CFDP1-211ENST00000612761 FMNL1O95466 1100 aaPredicted RBP9.98□□□□□ -0.81
CFDP1-211ENST00000612761 Q3C1V9 767 aa9.98□□□□□ -0.81
CFDP1-211ENST00000612761 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
CFDP1-211ENST00000612761 SPIRE2Q8WWL2 714 aa9.98□□□□□ -0.81
CFDP1-211ENST00000612761 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
CFDP1-211ENST00000612761 DIXDC1Q155Q3 683 aa9.97□□□□□ -0.81
CFDP1-211ENST00000612761 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.97□□□□□ -0.81
CFDP1-211ENST00000612761 RGS20O76081 388 aa9.96□□□□□ -0.82
CFDP1-211ENST00000612761 THAP11Q96EK4 314 aa9.96□□□□□ -0.82
CFDP1-211ENST00000612761 BRICD5Q6PL45 260 aa9.95□□□□□ -0.82
CFDP1-211ENST00000612761 HLA-CQ95604 372 aa9.95□□□□□ -0.82
CFDP1-211ENST00000612761 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
CFDP1-211ENST00000612761 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
CFDP1-211ENST00000612761 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
CFDP1-211ENST00000612761 FDX1P10109 184 aa9.93□□□□□ -0.82
CFDP1-211ENST00000612761 GUCA2AQ02747 115 aa9.93□□□□□ -0.82
CFDP1-211ENST00000612761 KDM4CQ9H3R0 1056 aa9.93□□□□□ -0.82
CFDP1-211ENST00000612761 GPBP1L1Q9HC44 474 aaPredicted RBP9.93□□□□□ -0.82
CFDP1-211ENST00000612761 MOXD2PA6NHM9 499 aa9.92□□□□□ -0.82
CFDP1-211ENST00000612761 S1PR4O95977 384 aa9.92□□□□□ -0.82
CFDP1-211ENST00000612761 NDUFV2P19404 249 aa9.91□□□□□ -0.82
CFDP1-211ENST00000612761 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
CFDP1-211ENST00000612761 FAM160A2Q8N612 972 aaPredicted RBP9.9□□□□□ -0.82
CFDP1-211ENST00000612761 GJA5P36382 358 aa9.89□□□□□ -0.83
CFDP1-211ENST00000612761 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
CFDP1-211ENST00000612761 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
CFDP1-211ENST00000612761 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
CFDP1-211ENST00000612761 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms