RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 LAMC1P11047 1609 aa18.82■□□□□ 0.6
NEAT1-204ENST00000612303 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
NEAT1-204ENST00000612303 NLRP1Q9C000 1473 aa18.81■□□□□ 0.6
NEAT1-204ENST00000612303 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
NEAT1-204ENST00000612303 NEXMIFQ5QGS0 1516 aa18.8■□□□□ 0.6
NEAT1-204ENST00000612303 A2ML1A8K2U0 1454 aa18.8■□□□□ 0.6
NEAT1-204ENST00000612303 HSPA5P11021 654 aaKnown RBP18.8■□□□□ 0.6
NEAT1-204ENST00000612303 CARD11Q9BXL7 1154 aa18.8■□□□□ 0.6
NEAT1-204ENST00000612303 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
NEAT1-204ENST00000612303 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
NEAT1-204ENST00000612303 CEBPAP49715 358 aaPredicted RBP18.79■□□□□ 0.6
NEAT1-204ENST00000612303 NBPF1Q3BBV0 1214 aa18.77■□□□□ 0.6
NEAT1-204ENST00000612303 USP47Q96K76 1375 aa18.77■□□□□ 0.6
NEAT1-204ENST00000612303 SETD1BQ9UPS6 1966 aaKnown RBP18.77■□□□□ 0.59
NEAT1-204ENST00000612303 PIK3C2GO75747 1445 aa18.75■□□□□ 0.59
NEAT1-204ENST00000612303 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
NEAT1-204ENST00000612303 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
NEAT1-204ENST00000612303 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
NEAT1-204ENST00000612303 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.74■□□□□ 0.59
NEAT1-204ENST00000612303 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
NEAT1-204ENST00000612303 CFAP70Q5T0N1 1121 aa18.72■□□□□ 0.59
NEAT1-204ENST00000612303 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
NEAT1-204ENST00000612303 RIMS2Q9UQ26 1411 aa18.72■□□□□ 0.59
NEAT1-204ENST00000612303 TMEM2Q9UHN6 1383 aa18.69■□□□□ 0.58
NEAT1-204ENST00000612303 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
NEAT1-204ENST00000612303 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
NEAT1-204ENST00000612303 MYO3AQ8NEV4 1616 aa18.68■□□□□ 0.58
NEAT1-204ENST00000612303 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
NEAT1-204ENST00000612303 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
NEAT1-204ENST00000612303 POLR1AO95602 1720 aaPredicted RBP18.66■□□□□ 0.58
NEAT1-204ENST00000612303 PTPRMP28827 1452 aa18.66■□□□□ 0.58
NEAT1-204ENST00000612303 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
NEAT1-204ENST00000612303 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
NEAT1-204ENST00000612303 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
NEAT1-204ENST00000612303 SLIT1O75093 1534 aa18.65■□□□□ 0.58
NEAT1-204ENST00000612303 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
NEAT1-204ENST00000612303 ADGRB1O14514 1584 aa18.64■□□□□ 0.58
NEAT1-204ENST00000612303 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
NEAT1-204ENST00000612303 EIF3AQ14152 1382 aaKnown RBP18.64■□□□□ 0.57
NEAT1-204ENST00000612303 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
NEAT1-204ENST00000612303 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
NEAT1-204ENST00000612303 ALKQ9UM73 1620 aa18.62■□□□□ 0.57
NEAT1-204ENST00000612303 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
NEAT1-204ENST00000612303 WASHC2AQ641Q2 1341 aa18.61■□□□□ 0.57
NEAT1-204ENST00000612303 EID1Q9Y6B2 187 aa18.61■□□□□ 0.57
NEAT1-204ENST00000612303 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
NEAT1-204ENST00000612303 TXNDC2Q86VQ3 553 aa18.59■□□□□ 0.57
NEAT1-204ENST00000612303 TESK2Q96S53 571 aa18.59■□□□□ 0.57
NEAT1-204ENST00000612303 PLEKHG1Q9ULL1 1385 aa18.58■□□□□ 0.57
NEAT1-204ENST00000612303 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
NEAT1-204ENST00000612303 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
NEAT1-204ENST00000612303 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
NEAT1-204ENST00000612303 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
NEAT1-204ENST00000612303 LTKP29376 864 aa18.56■□□□□ 0.56
NEAT1-204ENST00000612303 SETD1AO15047 1707 aaKnown RBP18.56■□□□□ 0.56
NEAT1-204ENST00000612303 SBNO2Q9Y2G9 1366 aa18.55■□□□□ 0.56
NEAT1-204ENST00000612303 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
NEAT1-204ENST00000612303 TMF1P82094 1093 aa18.54■□□□□ 0.56
NEAT1-204ENST00000612303 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
NEAT1-204ENST00000612303 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
NEAT1-204ENST00000612303 CENPJQ9HC77 1338 aaPredicted RBP18.52■□□□□ 0.56
NEAT1-204ENST00000612303 KDM4FA0A1W2PPD8 638 aa18.52■□□□□ 0.56
NEAT1-204ENST00000612303 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
NEAT1-204ENST00000612303 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.55
NEAT1-204ENST00000612303 MED14O60244 1454 aa18.52■□□□□ 0.55
NEAT1-204ENST00000612303 ADAMTS13Q76LX8 1427 aa18.51■□□□□ 0.55
NEAT1-204ENST00000612303 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
NEAT1-204ENST00000612303 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
NEAT1-204ENST00000612303 ABCC11Q96J66 1382 aa18.51■□□□□ 0.55
NEAT1-204ENST00000612303 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
NEAT1-204ENST00000612303 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
NEAT1-204ENST00000612303 SIRT1Q96EB6 747 aa18.5■□□□□ 0.55
NEAT1-204ENST00000612303 BCANQ96GW7 911 aa18.5■□□□□ 0.55
NEAT1-204ENST00000612303 DIP2AQ14689 1571 aa18.49■□□□□ 0.55
NEAT1-204ENST00000612303 METP08581 1390 aa18.47■□□□□ 0.55
NEAT1-204ENST00000612303 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
NEAT1-204ENST00000612303 STK26Q9P289 416 aa18.47■□□□□ 0.55
NEAT1-204ENST00000612303 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
NEAT1-204ENST00000612303 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
NEAT1-204ENST00000612303 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
NEAT1-204ENST00000612303 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
NEAT1-204ENST00000612303 TECPR2O15040 1411 aa18.45■□□□□ 0.54
NEAT1-204ENST00000612303 PIK3R4Q99570 1358 aa18.43■□□□□ 0.54
NEAT1-204ENST00000612303 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
NEAT1-204ENST00000612303 PRAM1Q96QH2 718 aa18.42■□□□□ 0.54
NEAT1-204ENST00000612303 POLR3GLQ9BT43 218 aa18.42■□□□□ 0.54
NEAT1-204ENST00000612303 POGKQ9P215 609 aa18.42■□□□□ 0.54
NEAT1-204ENST00000612303 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
NEAT1-204ENST00000612303 CPS1P31327 1500 aa18.4■□□□□ 0.54
NEAT1-204ENST00000612303 MIER1Q8N108 512 aa18.4■□□□□ 0.54
NEAT1-204ENST00000612303 EVC2Q86UK5 1308 aa18.4■□□□□ 0.54
NEAT1-204ENST00000612303 NPHP4O75161 1426 aaPredicted RBP18.38■□□□□ 0.53
NEAT1-204ENST00000612303 ANP32CO43423 234 aa18.37■□□□□ 0.53
NEAT1-204ENST00000612303 PTPRUQ92729 1446 aa18.36■□□□□ 0.53
NEAT1-204ENST00000612303 AMOTL2Q9Y2J4 779 aa18.35■□□□□ 0.53
NEAT1-204ENST00000612303 TULP4Q9NRJ4 1543 aa18.34■□□□□ 0.53
NEAT1-204ENST00000612303 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
NEAT1-204ENST00000612303 CHD2O14647 1828 aaKnown RBP18.34■□□□□ 0.53
NEAT1-204ENST00000612303 PTCH1Q13635 1447 aa18.33■□□□□ 0.53
NEAT1-204ENST00000612303 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms