RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 MYOM1P52179 1685 aa22.44■■□□□ 1.18
EWSR1-221ENST00000610553 KNSTRNQ9Y448 316 aa22.44■■□□□ 1.18
EWSR1-221ENST00000610553 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
EWSR1-221ENST00000610553 DUSP27Q5VZP5 1158 aa22.43■■□□□ 1.18
EWSR1-221ENST00000610553 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
EWSR1-221ENST00000610553 ASXL1Q8IXJ9 1541 aa22.42■■□□□ 1.18
EWSR1-221ENST00000610553 PIK3C2GO75747 1445 aa22.42■■□□□ 1.18
EWSR1-221ENST00000610553 SKAP1Q86WV1 359 aa22.42■■□□□ 1.18
EWSR1-221ENST00000610553 TRAPPC8Q9Y2L5 1435 aa22.41■■□□□ 1.18
EWSR1-221ENST00000610553 WDR43Q15061 677 aaKnown RBP eCLIP22.4■■□□□ 1.18
EWSR1-221ENST00000610553 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
EWSR1-221ENST00000610553 PTPRTO14522 1441 aa22.4■■□□□ 1.18
EWSR1-221ENST00000610553 CLTCL1P53675 1640 aa22.4■■□□□ 1.18
EWSR1-221ENST00000610553 CDCA8Q53HL2 280 aa22.39■■□□□ 1.17
EWSR1-221ENST00000610553 NPC1L1Q9UHC9 1359 aa22.39■■□□□ 1.17
EWSR1-221ENST00000610553 DEPDC5O75140 1603 aa22.38■■□□□ 1.17
EWSR1-221ENST00000610553 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
EWSR1-221ENST00000610553 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
EWSR1-221ENST00000610553 LAS1LQ9Y4W2 734 aaKnown RBP22.37■■□□□ 1.17
EWSR1-221ENST00000610553 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
EWSR1-221ENST00000610553 CENPQQ7L2Z9 268 aaPredicted RBP22.36■■□□□ 1.17
EWSR1-221ENST00000610553 KIAA1210Q9ULL0 1709 aa22.36■■□□□ 1.17
EWSR1-221ENST00000610553 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
EWSR1-221ENST00000610553 DDRGK1Q96HY6 314 aa22.36■■□□□ 1.17
EWSR1-221ENST00000610553 RTEL1-TNFRSF6BF6WH68 1400 aa22.35■■□□□ 1.17
EWSR1-221ENST00000610553 NEFMP07197 916 aa22.35■■□□□ 1.17
EWSR1-221ENST00000610553 TET3O43151 1660 aa22.35■■□□□ 1.17
EWSR1-221ENST00000610553 KDM5AP29375 1690 aaKnown RBP22.34■■□□□ 1.17
EWSR1-221ENST00000610553 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
EWSR1-221ENST00000610553 EIF3AQ14152 1382 aaKnown RBP22.32■■□□□ 1.16
EWSR1-221ENST00000610553 NEURL4Q96JN8 1562 aa22.32■■□□□ 1.16
EWSR1-221ENST00000610553 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
EWSR1-221ENST00000610553 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
EWSR1-221ENST00000610553 TRMT2AQ8IZ69 625 aaKnown RBP22.31■■□□□ 1.16
EWSR1-221ENST00000610553 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.3■■□□□ 1.16
EWSR1-221ENST00000610553 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
EWSR1-221ENST00000610553 VWDEQ8N2E2 1590 aa22.3■■□□□ 1.16
EWSR1-221ENST00000610553 SPAG9O60271 1321 aaKnown RBP22.3■■□□□ 1.16
EWSR1-221ENST00000610553 NKTRP30414 1462 aaKnown RBP22.27■■□□□ 1.16
EWSR1-221ENST00000610553 C8orf34Q49A92 452 aa22.26■■□□□ 1.15
EWSR1-221ENST00000610553 FAM161AQ3B820 660 aa22.25■■□□□ 1.15
EWSR1-221ENST00000610553 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
EWSR1-221ENST00000610553 MAP3K4Q9Y6R4 1608 aa22.25■■□□□ 1.15
EWSR1-221ENST00000610553 MYOM2P54296 1465 aa22.24■■□□□ 1.15
EWSR1-221ENST00000610553 ERVK-7P63135 1459 aa22.24■■□□□ 1.15
EWSR1-221ENST00000610553 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
EWSR1-221ENST00000610553 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
EWSR1-221ENST00000610553 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
EWSR1-221ENST00000610553 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
EWSR1-221ENST00000610553 SPINK5Q9NQ38 1064 aaPredicted RBP22.23■■□□□ 1.15
EWSR1-221ENST00000610553 ATP7AQ04656 1500 aa22.22■■□□□ 1.15
EWSR1-221ENST00000610553 FANCAO15360 1455 aa22.21■■□□□ 1.15
EWSR1-221ENST00000610553 APAF1O14727 1248 aa22.2■■□□□ 1.15
EWSR1-221ENST00000610553 IFT172Q9UG01 1749 aa22.19■■□□□ 1.14
EWSR1-221ENST00000610553 KANK1Q14678 1352 aa22.19■■□□□ 1.14
EWSR1-221ENST00000610553 MROH1Q8NDA8 1641 aa22.19■■□□□ 1.14
EWSR1-221ENST00000610553 MYO3AQ8NEV4 1616 aa22.19■■□□□ 1.14
EWSR1-221ENST00000610553 E9PSI1 815 aa22.18■■□□□ 1.14
EWSR1-221ENST00000610553 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
EWSR1-221ENST00000610553 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
EWSR1-221ENST00000610553 UGGT1Q9NYU2 1555 aa22.17■■□□□ 1.14
EWSR1-221ENST00000610553 VIRMAQ69YN4 1812 aaKnown RBP22.17■■□□□ 1.14
EWSR1-221ENST00000610553 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
EWSR1-221ENST00000610553 BCAR3O75815 825 aa22.15■■□□□ 1.14
EWSR1-221ENST00000610553 CFAP70Q5T0N1 1121 aa22.15■■□□□ 1.14
EWSR1-221ENST00000610553 CARD14Q9BXL6 1004 aa22.15■■□□□ 1.14
EWSR1-221ENST00000610553 KIF1BO60333 1816 aa22.15■■□□□ 1.14
EWSR1-221ENST00000610553 SBNO2Q9Y2G9 1366 aa22.15■■□□□ 1.14
EWSR1-221ENST00000610553 NFKBIBQ15653 356 aa22.14■■□□□ 1.14
EWSR1-221ENST00000610553 SLC4A3P48751 1232 aa22.14■■□□□ 1.13
EWSR1-221ENST00000610553 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
EWSR1-221ENST00000610553 DMRT2Q9Y5R5 561 aa22.13■■□□□ 1.13
EWSR1-221ENST00000610553 MROH2AA6NES4 1674 aa22.13■■□□□ 1.13
EWSR1-221ENST00000610553 RGS3P49796 1198 aa22.13■■□□□ 1.13
EWSR1-221ENST00000610553 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
EWSR1-221ENST00000610553 ADGRF5Q8IZF2 1346 aa22.13■■□□□ 1.13
EWSR1-221ENST00000610553 POLR3AO14802 1390 aaPredicted RBP22.13■■□□□ 1.13
EWSR1-221ENST00000610553 ADGRL1O94910 1474 aa22.12■■□□□ 1.13
EWSR1-221ENST00000610553 NINLQ9Y2I6 1382 aa22.12■■□□□ 1.13
EWSR1-221ENST00000610553 IL27Q8NEV9 243 aa22.11■■□□□ 1.13
EWSR1-221ENST00000610553 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
EWSR1-221ENST00000610553 DAXXQ9UER7 740 aaPredicted RBP22.11■■□□□ 1.13
EWSR1-221ENST00000610553 KIF3BO15066 747 aa22.09■■□□□ 1.13
EWSR1-221ENST00000610553 CGNL1Q0VF96 1302 aa22.09■■□□□ 1.13
EWSR1-221ENST00000610553 PDE3AQ14432 1141 aa22.09■■□□□ 1.13
EWSR1-221ENST00000610553 SETBP1Q9Y6X0 1596 aa22.08■■□□□ 1.12
EWSR1-221ENST00000610553 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
EWSR1-221ENST00000610553 IGHDP01880 384 aa22.07■■□□□ 1.12
EWSR1-221ENST00000610553 GSE1Q14687 1217 aa22.07■■□□□ 1.12
EWSR1-221ENST00000610553 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
EWSR1-221ENST00000610553 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
EWSR1-221ENST00000610553 WWC1Q8IX03 1113 aa22.06■■□□□ 1.12
EWSR1-221ENST00000610553 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
EWSR1-221ENST00000610553 ZC3H13Q5T200 1668 aaKnown RBP22.05■■□□□ 1.12
EWSR1-221ENST00000610553 IQSEC2Q5JU85 1478 aa22.05■■□□□ 1.12
EWSR1-221ENST00000610553 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
EWSR1-221ENST00000610553 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
EWSR1-221ENST00000610553 CLUAP1Q96AJ1 413 aa22.03■■□□□ 1.12
EWSR1-221ENST00000610553 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
EWSR1-221ENST00000610553 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms